New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	682075 =	46 (0.740)	3 (0.050)	3/316	NT	6.7%	coding (1198/1944 nt)	PP_0584	Methyl‑accepting chemotaxis transducer
	?	AE015451	682089 =	41 (0.720)					coding (1184/1944 nt)	PP_0584	Methyl‑accepting chemotaxis transducer

CAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTCACCTTGGGCAATGTCTTCCAGGCCATTGGTGACGCTGTT  >  AE015451/681863‑682306                                                                                                                                                                                                                                   |                                                                                                                                                                                                                          cAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGt                                                                                                                                                                                                                  >  1:421986/1‑236 (MQ=255)                 tGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTc                                                                                                                                                                                                                          <  2:1029114/212‑1 (MQ=255)                  gggCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTc                                                                                                                                                                                                 >  1:727093/1‑236 (MQ=255)                      cGATTGCTCGATTTCGTGACTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTc                                                                                                                                                                                                 >  2:1080661/1‑232 (MQ=255)                       gATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAg                                                                                                                                                                                              >  1:1042691/1‑234 (MQ=255)                         ttGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGt                                                                                                                                                                                                  <  2:1072423/228‑1 (MQ=255)                                      tGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAg                                                                                                                                                                             >  1:748032/1‑236 (MQ=255)                                                     aCGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGGCGCGGGt                                                                                                                                                                                                  >  2:1025957/1‑200 (MQ=255)                                                           tgtACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGt                                                                                                                                                           >  2:743320/1‑233 (MQ=255)                                                                      aTCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGAtgtg                                                                                                                                                  >  1:936218/1‑231 (MQ=255)                                                                          aTCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAg                                                                                                                                         >  1:434608/1‑236 (MQ=255)                                                                             tgctgctgcCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGc                                                                                                                                       <  1:955174/235‑1 (MQ=255)                                                                                     cccTTCGGGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAAt                                                                                                                                <  1:865566/234‑1 (MQ=255)                                                                                       cTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGt                                                                                                                                                                                                  >  2:568547/1‑166 (MQ=255)                                                                                            cgGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGctgctg                                                                                                                                                                                        <  2:603171/171‑1 (MQ=255)                                                                                            cgGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGcagcag                                                                                                                                                            >  2:535406/1‑199 (MQ=255)                                                                                                                ctcggtgccattcgcagcctgatccagcacagcggcactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccTCGGCCATGTCa                                                                                                                                                                                                                <  2:66177‑M2/12‑1 (MQ=255)                                                                                                                   ggtgccattcgcagcctgatccagcacagcggcactgctgccagcaagatcctcagcacgtccagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccTCGGCCATGTCACTGGAGACGCGGGTCGAGctgctg                                                                                                                                                                                        <  2:602492‑M2/36‑1 (MQ=255)                                                                                                                   ggCCGACGGCGCCGCCTGGGTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGAGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAgctgc                                                                                                                                                                                          <  2:97791/146‑1 (MQ=255)                                                                                                                        aCTGCGCCGCCTGGCTGCAGGACCGGGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTg                                                                                                                                                          <  2:326010/173‑1 (MQ=255)                                                                                                                           ccgccgcCTGGCTGCAGGACCGTGCCACTTCATTGGCGTTGGCGACCATTTCGTGGAGTGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAg                                                                                                                       <  1:260821/204‑1 (MQ=255)                                                                                                                             gccgccCGGCTGCCGGACCGGGCCCCCTCATTGGCGGGGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAgct                                                                                                                                                                                            <  1:500274/134‑1 (MQ=255)                                                                                                                                 ccTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTtc                                                                                   >  1:407021/1‑235 (MQ=255)                                                                                                                                   tGGCTGCAGGACCGTGCCACGTCATGGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCGTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAgg                                                                                                                                                                            <  2:92491/144‑1 (MQ=255)                                                                                                                                    ggCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCCTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGAc                                                                                                                                                                                     >  2:657681/1‑134 (MQ=255)                                                                                                                                         cAGGCCCGTGCCGCTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAgc                                                                                                                                                                                             <  2:998493/121‑1 (MQ=255)                                                                                                                                                cggcactgctgcaagaaagaccctcagcccgtccagcagctctacccgcgtctccagtgacatggccggggcggccggccgccTCGGCCATGTCACTGGAGACGCGGGTc                                                                                                                                                                                                 <  2:1046731‑M2/27‑1 (MQ=255)                                                                                                                                                    cACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTg                                                                                                                                                          <  2:763349/145‑1 (MQ=255)                                                                                                                                                       ttCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCg                                                                                                                                                       <  2:390736/145‑1 (MQ=255)                                                                                                                                                          aTTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGc                                                         >  1:738275/1‑236 (MQ=255)                                                                                                                                                              gCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCggg                                                      >  1:691085/1‑235 (MQ=255)                                                                                                                                                                 gTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggtca                                                   <  2:691084/235‑1 (MQ=255)                                                                                                                                                                    gCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTg                                                                                                                                                          <  2:1134576/129‑1 (MQ=255)                                                                                                                                                                      gACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCg                                                                                                                                   >  2:521695/1‑150 (MQ=255)                                                                                                                                                                       aCCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCAc                                             <  1:1080662/235‑1 (MQ=255)                                                                                                                                                                           tttCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTc                                         <  1:535407/235‑1 (MQ=255)                                                                                                                                                                            acgtcaagcagctcgacccgcgtctccagtgacatggccgaggcggccggccgccTCg                                                                                                                                                                                                                         <  1:383302‑M2/3‑1 (MQ=255)                                                                                                                                                                              cggggAATGCGGTGGAAACCATGTCCACGGCTTCGCGCGGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGcc                                                                          <  2:240534/196‑1 (MQ=255)                                                                                                                                                                              cGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggtca                                                   <  1:661375/222‑1 (MQ=255)                                                                                                                                                                               gTGGAATGCGGGGGAACCCATGTCCACGGCTTCGCGCT‑GCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGt                                                                                                                                                                                   <  2:438891/92‑1 (MQ=255)                                                                                                                                                                                 cagcagctcgacccgcgtctccagtgacatggccgaGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGCTGTGCTGGATCAGGCTGCGAATGGCAcc                                                                                                                          <  2:602492‑M1/112‑1 (MQ=255)                                                                                                                                                                                     ggCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggtc                                                    <  1:249001/213‑1 (MQ=255)                                                                                                                                                                                        ggTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggt                                                     >  2:907394/1‑210 (MQ=255)                                                                                                                                                                                         gTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTCACCTTGGGCAATGTc                          <  1:412771/236‑1 (MQ=255)                                                                                                                                                                                          gacccgcgtctccagtgacatggccgaGGCGGCCGGCCGCCCCGGCCATGTCACTGGAGACGCGGGTAGAGCTGCTGGACGGGCTGAGGGTCTTTCTTGCAGCAGTGCCg                                                                                                                                                       <  2:1046731‑M1/83‑1 (MQ=255)                                                                                                                                                                                                 cATGTCCACGGCTGCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCGGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGtt                                                                                                     <  2:352450/153‑1 (MQ=255)                                                                                                                                                                                                       cccGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTc                                         <  1:739881/205‑1 (MQ=255)                                                                                                                                                                                                         tgacatggccgaGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGCTGTGCTGGATCAGGCTGCGAATGGCACCGAg                                                                                                                       <  2:66177‑M1/115‑1 (MQ=255)                                                                                                                                                                                                            cTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGGTGCGGGTCAGGTCACCCTCACCTTGGGCAATGTCtt                        >  1:957823/1‑219 (MQ=255)                                                                                                                                                                                                                gcgcTGGCGGCCGGCCGCCTCGGCCAGGTCACTGGGGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggtcaggtca                                              <  1:294074/193‑1 (MQ=255)                                                                                                                                                                                                                  gcTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGAcgcg                                                                                                                                                                                                     >  1:758030/1‑40 (MQ=255)                                                                                                                                                                                                                  gcTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTCACCTTGGGCAATGTCTTCCAGGCCATTGGTGACGCTGtt  >  1:524546/1‑235 (MQ=255)                                                                                                                                                                                                                  cgaGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTTGACGt                                                                                                                                                                                   <  1:383302‑M1/55‑1 (MQ=255)                                                                                                                                                                                                                   cgGGCGGCCGGCCGCCTCGGCCATGTCGCTGGAGACGCGGGTCGAGCTGCCGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGaa                                                                                                                                 >  2:322263‑M1/3‑107 (MQ=255)                                                                                                                                                                                                                        GGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGGGCTTAGGATCTTGCTGGCAGCAGTGCCGATGTGCTg                                                                                                                                               <  1:360624‑M1/88‑1 (MQ=255)                                                                                                                                                                                                                            ggccgccTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGACCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGACCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGggtcaggtca                                              >  1:505678‑M2/8‑181 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                          CAGCTGTTGGATCGACTGGGCCGATTGCTCGATTTCGTGGCTAAGGCGATCAACGCTGTGTACCGCCGCATCGATCTGCTGCTGCCCTTCGCGGGCCTGCTGCTGGCCGCTATCGGCCGACTGCGCCGCCTGGCTGCAGGACCGTGCCACTTCATTGGCGGTGGCGACCATTTCGTGGAATGCGGTGGAAACCATGTCCACGGCTTCGCGCTGGCGGCCGGCCGCCTCGGCCATGTCACTGGAGACGCGGGTCGAGCTGCTGGACGTGCTGAGGATCTTGCTGGCAGCAGTGCCGATGTGCTGGATCAGGCTGCGAATGGCACCGAGGAACTGGTTGAACCAGTTGGCCAGTTGCGCGGTTTCGTCGCGGCCGCGGATTTCCAGGTTGCGGGTCAGGTCACCCTCACCTTGGGCAATGTCTTCCAGGCCATTGGTGACGCTGTT  >  AE015451/681863‑682306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.