New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1716625	65 (1.050)	7 (0.130)	7/304	NT	11.3%	coding (573/621 nt)	PP_1512	conserved protein of unknown function
	?	AE015451	= 1716605	52 (0.950)					coding (593/621 nt)	PP_1512	conserved protein of unknown function

CATCAGCGGTTTTCGCCTGAAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTTCATCACCACCGGGCGCAGCCAGCTGTTGTTGATGTCGAGCTGGCGCTGTTGCTC  >  AE015451/1716373‑1716837                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                         cATCAGCGGTTTTCGCCTGAAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGca                                                                                                                                                                                                                                          >  2:417229/1‑233 (MQ=255)    cAGCGGTTTTCGCCTGAAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactg                                                                                                                                                                                                                                    >  1:1057308‑M2/1‑230 (MQ=255)        ggTTTTCGCCTGAAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggc                                                                                                                                                                                                                                 >  1:978250‑M2/1‑226 (MQ=255)            ttCGCCTGCAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCC                                                                                                                                                                                                                            <  1:378953‑M1/236‑1 (MQ=255)            ttCGCCTGACGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgg                                                                                                                                                                                                                                   >  1:762848‑M2/1‑222 (MQ=255)                                    ttAGCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggcgcgcccagtggtgctgaacaacgtgcgc                                                                                                                                                                                                     >  1:758833‑M2/1‑198 (MQ=255)                                          tGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTctgc                                                                                                                                                                                              <  1:370431/236‑1 (MQ=255)                                           ggCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCCGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGC                                                                                                                                                                                                                                 <  2:266791‑M1/200‑1 (MQ=255)                                            gcgcGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGT                                                                                                                                                                                                                        <  1:806013‑M1/208‑1 (MQ=255)                                             cgcgTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCTGGTCATTctgctg                                                                                                                                                                                            >  1:618093/1‑235 (MQ=255)                                               cgTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCtt                                                                                                                                                                                         <  1:1029218/236‑1 (MQ=255)                                                    cTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccact                                                                                                                                                                                                                                     <  1:619293‑M2/187‑6 (MQ=255)                                                    cTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGcc                                                                                                                                                                                     >  1:854657/1‑235 (MQ=255)                                                           gcgggcggGCAGAAGGCGGGATTCGGGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCC                                                                                                                                                                                                                            <  1:171299‑M1/189‑1 (MQ=255)                                                                        aGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACgg                                                                                                                                                                 >  1:397069/1‑235 (MQ=255)                                                                                    tGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGa                                                                                                                                                                                                               <  2:629671/177‑1 (MQ=255)                                                                                     gCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACACCGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAc                                                                                                                                                                                                                                         >  2:1007768‑M2/1‑149 (MQ=255)                                                                                             tGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCg                                                                                                                                                      >  2:757551/1‑225 (MQ=255)                                                                                             tGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGC                                                                                                                                                                                                                                 <  2:809362‑M1/150‑1 (MQ=255)                                                                                                agcagGCCGCTTGCGGGAGCTGCAGCACGGTACTGGGGCCGGATGACAGCGCTGCGCACCGCATCCACTTGCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGa                                                                                                                                                                                                               <  2:127379/165‑1 (MQ=255)                                                                                                        gCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACgg                                                                                                                                                                 >  1:920591/1‑203 (MQ=255)                                                                                                        gCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACgg                                                                                                                                                                 <  2:920590/203‑1 (MQ=255)                                                                                                         cTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCgtcgtc                                                                                                                                                                       <  2:563942/196‑1 (MQ=255)                                                                                                           tGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACACCGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggtt                                                                                                                                          <  1:358386‑M1/223‑77 (MQ=255)                                                                                                           ggcGAGAGCTTCAGCACGGTGCTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGtgctgaacaacgtgcgcgc                                                                                                                                                                                                   <  2:351503‑M1/165‑20 (MQ=255)                                                                                                             cGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacag                                                                                                                                                                             <  1:493279‑M1/186‑42 (MQ=255)                                                                                                                   cTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATgg                                                                                                                     <  1:892255/236‑1 (MQ=255)                                                                                                                        gCACGGTGCTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAG‑CTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCC                                                                                                                                                                                                                            <  2:213718‑M1/127‑1 (MQ=255)                                                                                                                            ggTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAAc                                                                                                             <  1:1115424/235‑1 (MQ=255)                                                                                                                            ggTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAAc                                                                                                             <  1:649147/235‑1 (MQ=255)                                                                                                                               aCTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGt                                                                                                          >  1:875815/1‑235 (MQ=255)                                                                                                                                 tGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCca                                                                                                                                                >  1:579148/1‑195 (MQ=255)                                                                                                                                   gggCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGa                                                                                                        <  2:399110/233‑1 (MQ=255)                                                                                                                                      ccGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGTGTCCTGCAGGt                                                                                                                                          >  2:946971/1‑196 (MQ=255)                                                                                                                                      ccGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGCTGGGCAGGAGCAGGGACcgtg                                                                                                   >  1:162893/1‑235 (MQ=255)                                                                                                                                      ccGGATTACAACGCTGCGCACCGCAACCACGTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACGGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACcgtgg                                                                                                  <  1:24142/236‑1 (MQ=255)                                                                                                                                         gATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGGGGATGTCGAACGCCAGGTc                                                                                                                                                                                                     >  2:258217/1‑134 (MQ=255)                                                                                                                                           ttACAACGCTGCGCCCCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACCGGGCGCGCCCAGTGGAt                                                                                                                                                                                                                    >  2:328709/1‑117 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggcgcgccca                                                                                                                                                                                                                          >  1:286399‑M2/1‑95 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGGTGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTGCCGGGGCCGGGTCCAGCAGGTTGCTTTCGAgg                                                                                                                               >  2:1001542/1‑201 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCg                                                                                                                                                            >  1:543920/1‑173 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGc                                                                                                                                       >  2:733344/1‑194 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGAcc                                                                                                      >  2:1068611/1‑227 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACcgtggcgggg                                                                                             >  1:163172/1‑236 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACcgtggcgggg                                                                                             >  1:986266/1‑236 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTACTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACcgtggcg                                                                                                >  1:1087463/1‑233 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCA                                                                                                                                                                                                                          >  2:286398‑M1/1‑111 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTG                                                                                                                                                                                                                                    >  2:816591‑M1/1‑101 (MQ=255)                                                                                                                                           ttACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTG                                                                                                                                                                                                                                    <  1:816592‑M1/101‑1 (MQ=255)                                                                                                                                                      cgcACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCgg                                                                                                                           <  2:579147/195‑1 (MQ=255)                                                                                                                                                         aCCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGGACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGcgt                                                                                                                                                                           >  2:861043/1‑144 (MQ=255)                                                                                                                                                         aCCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggcgcgcccagtggtgctgaccaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccgtgtccaggtcacagtggttg                                                                                                                                         <  2:435436‑M2/178‑98 (MQ=255)                                                                                                                                                         aCCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCgg                                                                                                                                                     >  1:268825/1‑166 (MQ=255)                                                                                                                                                             cAACCACTGTGACCTGGACACGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGGTCAGCACCACTGGGCGCGCCCAGTGGtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggttgcggt                                                                                                                                     <  2:435436‑M1/178‑82 (MQ=255)                                                                                                                                                              aaCCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggcgcgcccagtggtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggttgcggtgcgcagcggtgtaatccggccccagtaccgtgctgaagctctcgca                                                                                       <  1:358386‑M2/223‑148 (MQ=255)                                                                                                                                                               aCCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCgg                                                                                 <  1:484575/228‑1 (MQ=255)                                                                                                                                                                ccACTGTCACCTGGACATGGGGCGATGGCAGATCTGTCGGTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGTGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGcc                                                                                                                                                       <  1:241854/157‑1 (MQ=255)                                                                                                                                                                 cACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGCTCAGCAccactgagcgcgcccagtggtgctgaacaacgtgcgcgggttcgcct                                                                                                                                                                                           <  1:1060201‑M2/120‑48 (MQ=255)                                                                                                                                                                   cTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCggt                                                                       >  1:966112/1‑232 (MQ=255)                                                                                                                                                                        aCCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAg                                                                                                                 >  2:121699/1‑187 (MQ=255)                                                                                                                                                                        aCCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAggg                                                                                     >  2:779633/1‑215 (MQ=255)                                                                                                                                                                        aCCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGc                                                                          >  1:621166/1‑226 (MQ=255)                                                                                                                                                                        aCCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGa                                                                <  1:417230/236‑1 (MQ=255)                                                                                                                                                                             gACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCa                                                                                        >  1:834867/1‑207 (MQ=255)                                                                                                                                                                                     gcgcTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCATTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGAccc                                                             <  1:683563/226‑1 (MQ=255)                                                                                                                                                                                     gcgcTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGCGGCGTCGTCGAACGGTTCCGGGGcc                                                                                                                                                       >  1:212943/1‑136 (MQ=255)                                                                                                                                                                                       gcTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCCGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTCGCCAg                                                                                                                                                                                   >  2:284719/1‑106 (MQ=255)                                                                                                                                                                                          ggCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCcagca                                                                                                                                             >  2:749138/1‑141 (MQ=255)                                                                                                                                                                                          ggCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCcagca                                                                                                                                             <  1:749139/141‑1 (MQ=255)                                                                                                                                                                                          ggCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTTCATcacc                                                 >  2:394744/1‑233 (MQ=255)                                                                                                                                                                                          ggCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCAAGGGTGGCGTCGTCGAACGGTTCCggg                                                                                                                                                          >  2:150466/1‑128 (MQ=255)                                                                                                                                                                                          ggCAGATCTGTCGTTAGCCTCAGGCGTACGAGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTTCATcaccac                                               >  1:643117/1‑235 (MQ=255)                                                                                                                                                                                                 cTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCAccactgggcgcgcccagtggtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggttgcggtgcgcagcgttgtaatccggccccagtaccgtgctgaagctctcg                                                                                         <  1:493279‑M2/186‑146 (MQ=255)                                                                                                                                                                                                       ttAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGa                                                                <  1:757552/205‑1 (MQ=255)                                                                                                                                                                                                         aGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCg                                                                                                                            >  2:843571/1‑143 (MQ=255)                                                                                                                                                                                                              cAGGCGTACGCGCGCACGTTGTGCAGCAccactgggcgcgcccagtggtgctgaacaacgtg                                                                                                                                                                                                        <  2:510420‑M2/62‑35 (MQ=255)                                                                                                                                                                                                               aGGCGAACCCGCGCACGTTGTTCAGCACCACTGGGCGCGCTCAGTGGtgctgagcaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtg                                                                                                                                             <  1:1060201‑M1/120‑74 (MQ=255)                                                                                                                                                                                                                    tACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCC                                                                                                                                                                                                                            <  2:844178‑M1/36‑1 (MQ=255)                                                                                                                                                                                                                      cgcgcgCACGTTGGTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGGCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTg                                                           <  2:781107/195‑1 (MQ=255)                                                                                                                                                                                                                       gcgcgcACGTTGTTCAGCAccactgggcgcgcccagtggtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggttgcggtgcgcagcgttgtaatccggccccagcaccgtgctgaagctctcgcc                                                                                       <  2:351503‑M2/166‑148 (MQ=255)                                                                                                                                                                                                                         gcgcACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGtgctgaacaacgtgcgcgcgtacgcctgaggctaacgacagatctgccagcgccccatgtccaggtgaaagtggttgcggtgcgcagcgttgtaatccggccccagtaccgtgctgaagctctcgcaagcggcctgctgcacctgacgcaagaattccgccttctgcccgcccgcctgccagtcacgcgccaggctaa                >  1:758833‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                         gcgcACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATc                                                                      >  1:157107/1‑181 (MQ=255)                                                                                                                                                                                                                         gcgcACGTTGTTCAGCACCACTGGGCGCGCCCAGTG                                                                                                                                                                                                                       <  2:537767‑M1/36‑1 (MQ=255)                                                                                                                                                                                                                            cACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGtgctgcacaacgtgcgcgcgtacgcctg                                                                                                                                                                                          <  2:510420‑M1/62‑29 (MQ=255)                                                                                                                                                                                                                             aCGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCCGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTtcatga                                                   >  1:174915/1‑194 (MQ=255)                                                                                                                                                                                                                                      aGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTTCATCACCACCGGGCGCAGCCAGCTGTTGTTGATGTCGAGCTGGCGCTGTTGCTc  <  1:733345/236‑1 (MQ=255)                                                                                                                                                                                                                                         accacTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCg                                                                     <  2:660693/166‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                         CATCAGCGGTTTTCGCCTGAAGGACGGCCAGCGCATTATCCTGGCGCGTGACTGGCAGGCGGGCGGGCAGAAGGCGGAATTCTTGCGTCAGGTGCAGCAGGCCGCTTGCGAGAGCTTCAGCACGGTACTGGGGCCGGATTACAACGCTGCGCACCGCAACCACTTTCACCTGGACATGGGGCGCTGGCAGATCTGTCGTTAGCCTCAGGCGTACGCGCGCACGTTGTTCAGCACCACTGGGCGCGCCCAGTGGATGTCGAACGCCAGGTCATTCTGCTGCTTGGCCAGGGTGGCGTCGTCGAACGGTTCCGGGGCCGGGTCCAGCAGGTTGCTTTCCAGCTCGGCGATGGGCAGGAACAGTGACCGTGGCGTGGGGCCAGGGCCGGGTTCGGCGATCGGCTGACCCTGGTTCATCACCACCGGGCGCAGCCAGCTGTTGTTGATGTCGAGCTGGCGCTGTTGCTC  >  AE015451/1716373‑1716837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.