New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2097456	54 (0.870)	5 (0.090)	5/324	NT	10.2%	coding (403/489 nt)	gpx	Hydroperoxy fatty acid reductase gpx1
	?	AE015451	= 2097554	37 (0.640)					coding (2336/2358 nt)	PP_1875	Sensor histidine kinase/response regulator

GAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAG  >  AE015451/2097320‑2097786                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         gAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAAt                                                                                                                                                                                                                                          <  1:619803/235‑1 (MQ=255)                                 aCGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggc                                                                                                                                                                                                            <  2:684261/233‑1 (MQ=255)                                         ggCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTg                                                                                                                                                                                                 <  1:754741/236‑1 (MQ=255)                                         cgcgcTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTg                                                                                                                                                                                                 <  2:798592/235‑1 (MQ=255)                                                aCCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAg                                                                                                                                                                                            >  1:581742/1‑234 (MQ=255)                                                  ccTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGt                                                                                                                                                                                          <  1:762983/234‑1 (MQ=255)                                                             cgAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCgcggcg                                                                                                                                                                                                           >  2:807813/1‑206 (MQ=255)                                                               aaCTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCccg                                                                                                                                                                           >  1:345714/1‑236 (MQ=255)                                                                        aaCGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATg                                                                                                                                                                                                                                         <  2:502987‑M2/165‑2 (MQ=255)                                                                              ccccGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGGAGGCGTTCATGCCCGCCGCCCGGc                                                                                                                                                                  >  1:189598/1‑230 (MQ=255)                                                                                      aTTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGttct                                                                                                                                                    >  1:966704/1‑236 (MQ=255)                                                                                        tttGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCccgaagaacgc                                                                                                                                                                   <  2:1041608/219‑9 (MQ=255)                                                                                            ggTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGGTCGCGTTCTTCGGGc                                                                                                                                              >  1:325625/1‑236 (MQ=255)                                                                                                                         cAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGCAGTCGTTCATGCCCGCCGccc                                                                                                                                                                     >  1:383065/1‑184 (MQ=255)                                                                                                                                cTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATg                                                                                                                   >  1:429777/1‑227 (MQ=255)                                                                                                                                   gTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCgg                                                                                                                                                                   <  2:102562/176‑1 (MQ=255)                                                                                                                                               aGTGGCCAGGTCAGGCGCTCTGCCCGCACCACCAAGCCACAGGCCTTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGAACCCAATggtcggccagaaactt                                                                                                                                                                                                                          >  2:189421‑M2/1‑93 (MQ=255)                                                                                                                                                   gCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGc                                                                                       >  2:493568/1‑236 (MQ=255)                                                                                                                                                   gCCAGGGCAAGCGCGATGCCCCCACCGCCAAGCCGCAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCGCCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCggg                                                                                                                                               <  2:177042/180‑1 (MQ=255)                                                                                                                                                         tCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATAc                                                                                 >  1:545726/1‑236 (MQ=255)                                                                                                                                                                cTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATg                                                                                                                                           >  1:712404/1‑171 (MQ=255)                                                                                                                                                                    gCCCCCGCCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttcgcgtt                                                                                                                                                      <  2:371698/156‑1 (MQ=255)                                                                                                                                                                     ccccccccccCAAGCCACAGGCCCTGGAGGCGGACAGCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGc                                                                                                                                   <  2:290958/174‑1 (MQ=255)                                                                                                                                                                     cccccACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATggtcgaccagaaacttggtgaagttccacttgatcttctggctacccaaaatacccggggcgcgttgcttgagttcgacgaacagagggtgagcgcccgggccgttgacctcgaccttgcgaaacagcggaaaactcacgccgaaattacgctcgcagaactgc                                                                      <  1:727118‑M2/235‑165 (MQ=255)                                                                                                                                                                     cccccACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCCGGGAGTCGATCATGCCCGCCGCCCGGCcgcggtgg                                                                                                                                                          >  2:211624/1‑147 (MQ=255)                                                                                                                                                                     cccccACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCgg                                                                                                 >  1:42210/1‑208 (MQ=255)                                                                                                                                                                           ccaccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATggtcgaccagaaacttggtgaagttccacttgatcttctggctacccaaaatacccggggcgcgttgcttgagttcgacgaacagagggtgagcgcccgggccgttgacctcgaccttgcgaaacagcggaaaactcacgccgaaattacgctcgca                                                                             <  2:1099604‑M2/222‑158 (MQ=255)                                                                                                                                                                           ccaccaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCg                                                                                                                                  >  2:849520/1‑169 (MQ=255)                                                                                                                                                                             accaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAgcgttc                                                                                                                                                           <  2:96054/142‑1 (MQ=255)                                                                                                                                                                             accaAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGc                                                               >  2:868492/1‑234 (MQ=255)                                                                                                                                                                                   ccACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATggtcgaccagaaacttggtgaagttccacttgatcttctggctacccaaaatacccggggcgcgttgcttgagttcgacgaacagagggtgagcgcccgggccgttgacctcgaccttgcgaaacagcggaaaactcacgccgaaattacgctcgcagaactgcgcaatttcccgcgc                                                        <  1:1130078‑M2/235‑179 (MQ=255)                                                                                                                                                                                    cacaGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATggtcgaccagaaccttg                                                                                                                                                                                                                         >  2:323784‑M2/1‑56 (MQ=255)                                                                                                                                                                                         gCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCgg                                                  >  1:1051207/1‑235 (MQ=255)                                                                                                                                                                                         gCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCg                                                   >  2:649271/1‑234 (MQ=255)                                                                                                                                                                                               gAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGtt                                            >  1:1094912/1‑235 (MQ=255)                                                                                                                                                                                                 ggCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCa                                         >  1:1000489/1‑236 (MQ=255)                                                                                                                                                                                                        aTCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCgg                                                                                     >  2:532597/1‑185 (MQ=255)                                                                                                                                                                                                           gAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGc                               <  1:649272/236‑1 (MQ=255)                                                                                                                                                                                                             gCGTTTGCTCAGCCGCTGACGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCg                                                                   <  2:445272/198‑1 (MQ=255)                                                                                                                                                                                                                     tCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGc                               <  2:1000488/226‑1 (MQ=255)                                                                                                                                                                                                                     tCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGGTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAg                          >  2:512781/1‑231 (MQ=255)                                                                                                                                                                                                                           gCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGACACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGATGGCCTCGTAGCCGTCCATCACCgg                                                  >  1:100736/1‑201 (MQ=255)                                                                                                                                                                                                                                      cccAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCGTGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCcag     >  1:630998/1‑235 (MQ=255)                                                                                                                                                                                                                                      cccAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTg                                                                         >  1:208620/1‑167 (MQ=255)                                                                                                                                                                                                                                         aaTGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCcagcag  >  1:1059021/1‑235 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         GAGTTTTCCGCTGTTTCGCAAGGTCGAGGTCAACGGCCCGGGCGCTCACCCTCTGTTCGTCGAACTCAAGCAACGCGCCCCGGGTATTTTGGGTAGCCAGAAGATCAAGTGGAACTTCACCAAGTTTCTGGTCGACCCGGCCAGTGGCCAGGTCAAGCGCTATGCCCCCACCACCAAGCCACAGGCCCTGGAGGCGGACATCGAGCGTTTGCTCAGCCGCTGAAGGGCACCCAATGGTCGACCAGGGCCAGTAGCTCTTCGCGGCGGAATGGCTTGGCCAGGTAGTCGTTCATGCCCGCCGCCCGGCAGCGTTCGCGTTCTTCGGGCATGGCGTTGGCGGTGAGGGCGACGATGGGCAACTCGGGCCAGCGGCCGCTTTGGCGGATACGCCGGCTGGCCTCGTAGCCGTCCATCACCGGCATGTTGCAGTCCATCAGCACCAGGTCGAATTCCTCGCGCGCCAGCAG  >  AE015451/2097320‑2097786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.