New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2258126 =	17 (0.270)	6 (0.100)	5/324	NT	20.3%	intergenic (+181/‑211)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	AE015451	4022806 =	31 (0.530)					intergenic (‑501/+167)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit

TTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCGGTAAAGGGCGGCTTGGCGAACCACACCAG  >  AE015451/4022574‑4023035                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                      ttgGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCAt                                                                                                                                                                                                                                    <  1:109631/236‑1 (MQ=255)                          aGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGcc                                                                                                                                                                                                            >  1:1022299/1‑235 (MQ=255)                                          aGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTg                                                                                                                                                                                           >  1:578033/1‑236 (MQ=255)                                                         aCCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGACGTCGCAATCcgc                                                                                                                                                                             >  1:442411/1‑235 (MQ=255)                                                               ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCcgc                                                                                                                                                                             <  1:833005/229‑1 (MQ=255)                                                                        cggcggGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATcg                                                                                                                                                             >  1:505916/1‑236 (MQ=255)                                                                                           aaaCGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAAACcgcg                                                                                                                                                                            >  2:556854/1‑202 (MQ=255)                                                                                              cgcgACAAAAAGTAACCAAAAACCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCgcggcg                                                                                                                                                                         <  2:442543/202‑1 (MQ=255)                                                                                                 cagcgttgcctattgctgtagctattgctgttgctgttgctgttgatcttgatcttgatcttgatcttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatCCATGCCCGTCACCTCCCTCCGcac                                                                                                                                                                                                               >  2:832587‑M2/138‑161 (MQ=255)                                                                                                                      gCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATc                                                                                                                                                              <  1:579924/189‑1 (MQ=255)                                                                                                                           cTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGa                                                                                                                                 >  1:834275/1‑213 (MQ=255)                                                                                                                                      cGGCCCCTGCGCTCCGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgagagc                                                                                                <  1:109325/235‑1 (MQ=255)                                                                                                                                        cgtttgatctggcttttgatctggcttttgatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgaga                                                                                                        <  1:553705‑M2/128‑1 (MQ=255)                                                                                                                                                       tCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTg                                                                              >  1:1101432/1‑236 (MQ=255)                                                                                                                                                         cGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgagagcgagagcgag                                                                                                   <  1:323514/213‑1 (MQ=255)                                                                                                                                                           gggTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCAt                                                                                                                                                                                                                                    <  2:1007733/82‑1 (MQ=33)                                                                                                                                                            ggTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATcg                                                                                                                                                             >  2:558729/1‑152 (MQ=255)                                                                                                                                                              ttCCCTCGCTCCGGGCTTGCTCCCCGGAGGACCGCGCTGCAGGCCCCATCCTGGAGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCCGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCCAAATCAAAAGCCGAagcgggagcgagagcg                                                                                                                 >  1:495973/1‑194 (MQ=255)                                                                                                                                                                   tCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTCTcgcgc                                                                                                                                                          >  2:51781/1‑148 (MQ=255)                                                                                                                                                                     gatcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATc                                                                                                                                                              <  1:480926‑M2/74‑1 (MQ=255)                                                                                                                                                                      atcttgatcttgatcttcgcgacttcaggaggccgaacgcaggccttgcggaggcaggtgacgggcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcga                                                                                                                      >  2:726611‑M2/69‑182 (MQ=255)                                                                                                                                                                        ccGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGa                                                                        <  2:505915/225‑1 (MQ=255)                                                                                                                                                                             cTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATcc                                                                                                                                                                               <  1:346855/117‑1 (MQ=33)                                                                                                                                                                                              cgcgccgaaGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGcc                                                         >  2:390189/9‑219 (MQ=25)                                                                                                                                                                                               gcgcTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGc                                      >  1:586925/1‑236 (MQ=255)                                                                                                                                                                                                cgcTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGc                                      >  1:593774/1‑235 (MQ=255)                                                                                                                                                                                                   tGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGc                                                                                                                                    >  2:1088902/1‑138 (MQ=255)                                                                                                                                                                                                   aggccgaacgcaggccttgcggaggcaggtgacgggcatCCATGCCcgg                                                                                                                                                                                                                              >  2:211188‑M2/40‑48 (MQ=255)                                                                                                                                                                                                     cAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATc                                                                                                                                                              <  2:833958/110‑1 (MQ=255)                                                                                                                                                                                                     cAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATc                                                                                                                                                              >  1:833959/1‑110 (MQ=255)                                                                                                                                                                                                     cAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTa                                  <  2:586924/234‑1 (MQ=255)                                                                                                                                                                                                        gCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgaga                                                                                                              >  2:17412/1‑156 (MQ=18)                                                                                                                                                                                                        gCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagcgaga                                                                                                              <  1:17412/156‑1 (MQ=18)                                                                                                                                                                                                        gCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCt                                    >  1:861500/1‑230 (MQ=255)                                                                                                                                                                                                        gCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAagcgagagcgagagc                                                                                                                  >  2:6125/1‑151 (MQ=255)                                                                                                                                                                                                         aacgcaggccttgcggaggcaggtgacgggcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCg                               >  1:590880‑M2/34‑234 (MQ=255)                                                                                                                                                                                                             aTCCTGGGGCC‑CAGCGCTTGACGTGCATCCATACCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGGAATCGCAATACGCGGCGCCt                                                                                                                                                                      >  2:1119073/1‑94 (MQ=14)                                                                                                                                                                                                                   gggCC‑CAGCGCTTGACGGACATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCGGTAAAGGGCGGCt                  <  1:434966/236‑1 (MQ=255)                                                                                                                                                                                                                      cc‑cAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGccc                                                                           >  2:565602/1‑175 (MQ=255)                                                                                                                                                                                                                              cTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGCAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCtt                                                                          >  2:285471/1‑170 (MQ=255)                                                                                                                                                                                                                                    gggcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCGGTAAAGGGCGgcttggcgtggcgtt      >  1:529912‑M2/7‑225 (MQ=255)                                                                                                                                                                                                                                      gcatCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCGGTAAAGGGCGGCTTGGCGAACCACCCcag  >  1:379004‑M2/5‑234 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                      TTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCTTAGAAGCAAAATCAAAAGCCGAAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCGAGAGCATCGGGATCTTGCCTTGATTTTAGCTCAATGCCCCGCCGATGCCGGGCCCGCCTTAGCGGTAAAGGGCGGCTTGGCGAACCACACCAG  >  AE015451/4022574‑4023035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.