New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 3622662 =57 (0.920)5 (0.090) 4/326 NT 7.9% coding (60/459 nt) PP_3193 conserved protein of unknown function
?AE015451 3622748 = 63 (1.070)coding (1305/1344 nt) PP_3194 conserved protein of unknown function

AGCCGCGGGCCTTGCCGGTGGCGATCTGCGGGCGCAGGAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCC  >  AE015451/3622520‑3622978
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      
aGCCGCGGGCCTTGCCGGTGGCGATCTGCGGGCGCAGGAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTaga                                                                                                                                                                                                                                 <  1:496836/236‑1 (MQ=255)
     cgGGCCTTGCCGGTGGCGATCTGCGGGCGCAGGAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAggtcg                                                                                                                                                                                                                            >  1:1049001/1‑236 (MQ=255)
             atccttcaagaccgcgctcggctgcaggcggtgtacaaggccggcgagccggtacggctgcaacgcaccgcctacaaccccaagcaggtgtcggacttcaattcgctgaaatggaccgacctctacacccgcgaccgcgtgtccgaactcggcaaatggaggctgtgagcatgacaacgctcaacttcgaactggcagtgcaactggcggtcgcgGGTGTAGAGGTCGGTCCAtt                                                                                                                                                                                                                     <  1:670340‑M2/20‑1 (MQ=255)
                          tGCGGGCGCAGGAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAggtcggtc                                                                                                                                                                                                                         >  2:654382/1‑218 (MQ=255)
                                     gAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCt                                                                                                                                                                                             <  1:1089888/235‑1 (MQ=255)
                                                    aTCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGc                                                                                                                                                                                           <  2:1016812/222‑1 (MQ=255)
                                                           tgcaCCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATCGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTTGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCAGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGt                                                                                                                                                                      <  2:1040766/235‑1 (MQ=255)
                                                           agcaCCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCAtt                                                                                                                                                                                                                     <  2:899063/189‑1 (MQ=255)
                                                           agcaCCGCCAACGGGTGGCCGGCGCTGTCGACCACCGCTGCGGCCATAGGCATGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCa                                                                                                                                                                                                                       <  2:1072509/187‑1 (MQ=255)
                                                            gcaCCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCt                                                                                                                                                                                             <  1:861058/212‑1 (MQ=255)
                                                             caCCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGc                                                                                                                                                                                           <  1:256948/213‑1 (MQ=255)
                                                              cggtacggctgcaacgcaccgcctacaaccccaagcaggtgtcggacttcaattcgctgaaatggaccgacctctacaccCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTaga                                                                                                                                                                                                                                 >  2:938743‑M1/81‑174 (MQ=255)
                                                                            gCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGAGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      <  1:1059181/235‑1 (MQ=255)
                                                                             gaaccgcctacaaccccaagcaggtgtcggacttcaattcgctgaaatggaccgacctctacacccgcgaccgcgtgtccgaacgcggcaaatggaggctgtgagcatgacaacgctcaacttcgaactggcagtgcaactggcggtcgcgGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGc                                                                                                                                                                                           <  1:47113‑M2/46‑1 (MQ=255)
                                                                             ccGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    <  1:654383/236‑1 (MQ=255)
                                                                                      tCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCa                                                                                                                                                                                                                  >  2:721369/1‑165 (MQ=255)
                                                                                         aGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGt                                                                                                                                          <  2:812551/234‑1 (MQ=255)
                                                                                            aCCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGt                                                                                                                                          <  1:576781/231‑1 (MQ=255)
                                                                                               gCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      <  2:1020238/216‑1 (MQ=255)
                                                                                                gccggtgtcggacttcaattcggtgaaatggaccgacctctacaccCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCgg                                                                                                                                                                                                                                        <  2:1047290‑M1/87‑1 (MQ=255)
                                                                                                gcaggtgtcggacttcaattcgctgaaatggaccgacctctacacccgcgaccgcgtgtccgaactcggcaaatggaggctgtgagcatgacaacgctcaacttcgaactggcagtgcaactggcggtcgcgGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGa                                                                                                                                                                                                  <  2:704275‑M2/39‑1 (MQ=255)
                                                                                                gcaggtgtcggacttcaattcgctgaaatggaccgacctctacaccCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGCGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCggttc                                                                                                                                                                        <  1:47113‑M1/151‑3 (MQ=255)
                                                                                                cTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTg                                                                                                                                                                                        <  1:251132/181‑1 (MQ=255)
                                                                                                 tGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTgg                                                                                                                                          >  1:183844/1‑225 (MQ=255)
                                                                                                   cGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCTACCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGTCCTTGTACACCGCCTGCa                                                                                                                              >  1:615490/1‑236 (MQ=255)
                                                                                                   cGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTa                                                                                                                                         >  1:853456/1‑225 (MQ=255)
                                                                                                   cGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGGCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCAATTTCAGc                                                                                                                                                                                                                >  1:250457/1‑154 (MQ=255)
                                                                                                    ggCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCAtt                                                                                                                                                                                                                     <  2:1012896/148‑1 (MQ=255)
                                                                                                       tcggacttcaattcgctgaaatggaccgacctctacaccCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGc                                                                                                                                                                                           <  2:704275‑M1/132‑1 (MQ=255)
                                                                                                          aGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAgc                                                                                                                       <  1:671483/236‑1 (MQ=255)
                                                                                                                gAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTACAAccccaagcagg                                                                                                                  <  1:131919/235‑10 (MQ=255)
                                                                                                                   gTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      <  1:473248/196‑1 (MQ=255)
                                                                                                                   gTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      >  2:473247/1‑196 (MQ=255)
                                                                                                                        aaGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGaa                                                                                                            <  1:57984/233‑1 (MQ=255)
                                                                                                                          gcgcGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    <  1:331159/191‑1 (MQ=255)
                                                                                                                          aatggaccgacctctacaccCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGAt                                                                                                        <  1:670340‑M1/215‑1 (MQ=255)
                                                                                                                            gcgTGCATGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGCGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGa                                                                                                                         <  1:458611/216‑1 (MQ=255)
                                                                                                                                      tctacacccgcgaccgcgtgtccgaactcggcaaatggaggctgtgagcatgacaacgctcaacttcgaactggcagtgcaactggcggtcgcgGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCg                                                                                                                                                         >  2:938743‑M2/95‑174 (MQ=255)
                                                                                                                                      tGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATgtcg                                                                                              <  2:733195/233‑1 (MQ=255)
                                                                                                                                        cAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAg                                                                                         >  1:572325/1‑236 (MQ=255)
                                                                                                                                           ggTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    <  1:430814/174‑1 (MQ=255)
                                                                                                                                           ggTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCtt                                                                                                               <  2:1077260/211‑1 (MQ=255)
                                                                                                                                             ccgcgaccgcgtgtccgaactcggcaaatggaggctgtgagcatgacaacgctcaacttcgaactggcagtgcaactggcggtcgcgGGTGTAGAGGTCGGTCCATTTCACCGAATTGAAGTCCGACACCGGc                                                                                                                                                                                           <  2:1047290‑M2/46‑1 (MQ=255)
                                                                                                                                                CGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGc                                                                                                                                                                        >  2:712797‑M1/1‑149 (MQ=255)
                                                                                                                                                 GACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCTCAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGa                                                                                                                         >  2:614744‑M1/1‑195 (MQ=255)
                                                                                                                                                 GACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACACGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAg                                                                                                                        <  1:845419‑M1/196‑1 (MQ=255)
                                                                                                                                                  ACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAAc                                                                                 >  2:501888‑M1/1‑234 (MQ=255)
                                                                                                                                                   CCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    <  2:425333‑M1/166‑1 (MQ=255)
                                                                                                                                                   CCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    >  1:425334‑M1/1‑166 (MQ=255)
                                                                                                                                                   CCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAg                                                                                                           <  1:33132‑M1/207‑1 (MQ=255)
                                                                                                                                                   CCGCCAGTTGCACTGCCAGTTCGAAGTGGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGa                                                                                                                         >  2:455838‑M1/1‑193 (MQ=255)
                                                                                                                                                     GCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCg                                                                            >  1:688476‑M1/1‑236 (MQ=255)
                                                                                                                                                       cAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTCGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCgg                                                                                                    <  2:1070474/210‑1 (MQ=255)
                                                                                                                                                        aGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCGTGTACACCGCCTGCAGcc                                                                                                                           >  1:134977/1‑186 (MQ=255)
                                                                                                                                                         gTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCtt                                                                                                               >  1:1073524/1‑197 (MQ=255)
                                                                                                                                                         gTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGc                                                                                     >  1:926833/1‑223 (MQ=255)
                                                                                                                                                          ttGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAg                                                                          >  2:454043/1‑233 (MQ=255)
                                                                                                                                                            gCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGCAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCAcc                                                                      >  1:619750/1‑235 (MQ=255)
                                                                                                                                                                  ccAGTGCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACCCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAgc                                                                                                                       <  1:703059/180‑1 (MQ=255)
                                                                                                                                                                     gTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTACGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGcc                                                                                                                                                  >  2:471631/1‑150 (MQ=255)
                                                                                                                                                                       tCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGACGGATGCGGATgtcgtc                                                                                            >  2:86217/1‑202 (MQ=255)
                                                                                                                                                                       tCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTcc                                                                                           >  2:407566/1‑203 (MQ=255)
                                                                                                                                                                          aaGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGt                                                       >  1:1108570/1‑236 (MQ=255)
                                                                                                                                                                            gTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGtt                                                      <  1:920209/235‑1 (MQ=255)
                                                                                                                                                                             ttGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGttt                                                     <  1:576330/235‑1 (MQ=255)
                                                                                                                                                                               gAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGc                                                   >  1:95866/1‑235 (MQ=255)
                                                                                                                                                                                aGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAggg                                                                                       <  1:248018/198‑1 (MQ=255)
                                                                                                                                                                                    ttGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTg                                                                                                                                                                                            <  2:746889/93‑1 (MQ=255)
                                                                                                                                                                                       gcATGCTCACAGCCTCCGTTTGCCGAGTGCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACATGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGcc                                                                                                                           <  2:127150/154‑1 (MQ=255)
                                                                                                                                                                                         aTGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGttt                                                     <  2:1049000/223‑1 (MQ=255)
                                                                                                                                                                                            cTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGa                                                                                                   <  2:367811/174‑1 (MQ=255)
                                                                                                                                                                                                    cTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAgg                                        >  1:53343/1‑225 (MQ=255)
                                                                                                                                                                                                    cTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGc                               >  1:72610/1‑234 (MQ=255)
                                                                                                                                                                                                    cTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGt                             >  1:748401/1‑236 (MQ=255)
                                                                                                                                                                                                    cTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGt                             >  1:795947/1‑236 (MQ=255)
                                                                                                                                                                                                        aTTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCg                                                                                                                                                    <  2:77916/113‑1 (MQ=255)
                                                                                                                                                                                                        aTTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCt                                                         >  2:688805/1‑204 (MQ=255)
                                                                                                                                                                                                           tGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAgc                                                                                                                       <  1:1132511/139‑1 (MQ=255)
                                                                                                                                                                                                           tGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTcgccg                      <  1:688404/236‑1 (MQ=255)
                                                                                                                                                                                                                aGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCgggt                                             >  1:937204/1‑206 (MQ=255)
                                                                                                                                                                                                                     ggACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      >  1:927809/1‑98 (MQ=255)
                                                                                                                                                                                                                     ggACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      <  2:927808/98‑1 (MQ=255)
                                                                                                                                                                                                                       acacGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACCCCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCt                                                                                                                                                      <  1:207669/96‑1 (MQ=255)
                                                                                                                                                                                                                               gcgcgGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGGCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGcc  <  1:373873‑M2/231‑1 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                      
AGCCGCGGGCCTTGCCGGTGGCGATCTGCGGGCGCAGGAAGCTGGCCTGCTCATCGCGCAGCACCGCCAACGGGTGGCCGGCGCTGTCGAGCACCGCTGCGGCCATAGGCTTGAGGTTCAAAGCGCGTGCCTGGTGCAGGGTCGCGACCGCCAGTTGCACTGCCAGTTCGAAGTTGAGCGTTGTCATGCTCACAGCCTCCATTTGCCGAGTTCGGACACGCGGTCGCGGGTGTAGAGGTCGGTCCATTTCAGCGAATTGAAGTCCGACACCTGCTTGGGGTTGTAGGCGGTGCGTTGCAGCCGTACCGGCTCGCCGGCCTTGTACACCGCCTGCAGCCGAGCGCGGTCTTGAAGGATGCGGATGTCGTCCAGGGGCGAACCGTCGAGCACCAGCAGGTCGGCCTGTTTGCCCGGTTCCAGGGTGCCGAGCGTCTCGCCGCGCGGCATCAAGCGTGCGCC  >  AE015451/3622520‑3622978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.