New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 536348471 (1.150)5 (0.080) 5/328 NT 7.8% coding (282/1341 nt) glmM Phosphoglucosamine mutase
?AE015451 = 5363528 51 (0.860)coding (238/1341 nt) glmM Phosphoglucosamine mutase

AGCGGCCGGCGGCATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGTACCAAAGTATTTT  >  AE015451/5363297‑5363757
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                     
aGCGGCCGGCGGCATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTc                                                                                                                                                                                                                                      <  2:682846‑M2/233‑2 (MQ=255)
 gCGGCCGGCGGCATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTcg                                                                                                                                                                                                                                     >  2:683258‑M2/1‑231 (MQ=255)
       ggcggcATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGcc                                                                                                                                                                                                                            >  1:295601/1‑236 (MQ=255)
            cATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCg                                                                                                                                                                                                                          >  2:691093/1‑233 (MQ=255)
                   gATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGagcagc                                                                                                                                                                                                                    <  2:616365/232‑1 (MQ=255)
                                  gCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTcggcatcgtca                                                                                                                                                                                                                            >  1:41849‑M2/1‑198 (MQ=255)
                                   cccAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  2:810113/209‑1 (MQ=255)
                                    ccAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTcggcatcgtcatcag                                                                                                                                                                                                                        >  2:706027‑M2/1‑196 (MQ=255)
                                    ccAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  1:9550/208‑1 (MQ=255)
                                                    gACAACGTTCATCGGTTGGTCGGTCAGCTCTTCGATCATCAGCTCGTCCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCgg                                                                                                                                                                                                          <  1:5836/209‑1 (MQ=255)
                                                                                   tCGGTCATCAGCTCGGCCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATAc                                                                                                                                                 <  1:193070/235‑1 (MQ=255)
                                                                                    cGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGGCGGCATCGGCCCgg                                                                                                                                                                                                                         >  2:765805/1‑161 (MQ=255)
                                                                                         atcaGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTc                                                                                                                                          >  1:813952/1‑236 (MQ=255)
                                                                                              cTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  2:1128796/150‑1 (MQ=255)
                                                                                                 gACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTc                                                                                                                                                                     >  1:669276/1‑201 (MQ=255)
                                                                                                 gACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCcca                                                                                                                                  >  1:673530/1‑236 (MQ=255)
                                                                                                  aCCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  1:296363/146‑1 (MQ=255)
                                                                                                    cTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGGGGGCGGACTCGAACATGGAGCCGgaga                                                                                                                                                    >  1:368394/1‑215 (MQ=255)
                                                                                                      cGTCCGGCGGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTcggcatcgtcatcagtgcctcgcacaacccgcacgatgacaacgg                                                                                                                                                                                          >  1:796124‑M2/1‑130 (MQ=255)
                                                                                                         ccGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGGGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGcc                                                                                                                                                                                                  >  2:300871/1‑164 (MQ=255)
                                                                                                         ccGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGcc                                                                                                                                                                                       >  2:315045/1‑175 (MQ=255)
                                                                                                         ccGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGACACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTATGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACTTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTcc                                                                                                                                         <  2:1071786/221‑1 (MQ=255)
                                                                                                            gCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGagcag                                                                                                                                                                                                                     <  2:282810/142‑1 (MQ=255)
                                                                                                            gCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATAAGCGTGTCCTTGCCCACCAGCAcgcg                                                                                                                        <  1:1044587/235‑1 (MQ=255)
                                                                                                                  tGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGc                                                                                                                             <  2:1121441/224‑1 (MQ=255)
                                                                                                                  tGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGCGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATg                                                                                                                  <  1:1072272/235‑1 (MQ=255)
                                                                                                                   ggTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGCCGATTCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCgg                                                                                                                                                                                                          <  2:556026/146‑1 (MQ=255)
                                                                                                                   ggTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGGAAGCGATGGCCGGTGTCGGCATCGGCCCGagcagc                                                                                                                                                                                                                    >  1:357285/1‑136 (MQ=255)
                                                                                                                     tGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCct                                                                                                              >  1:502764/1‑236 (MQ=255)
                                                                                                                             cccGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCg                                                                                                      >  1:784664/1‑236 (MQ=255)
                                                                                                                             cccGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCg                                                                                                      >  1:863348/1‑236 (MQ=255)
                                                                                                                               cGAGAATAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGcc                                                                                                                                    <  1:931649/204‑1 (MQ=255)
                                                                                                                                gagaAGAACTTGATGCCGGTGTCATCGTGCGGGTTGGGCGAGGCCCTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTcggcatcgtcatcagtgcctcgcacaacccgcacgatgacaacggcatcaagttcttc                                                                                                                                                                             >  1:88597‑M2/1‑104 (MQ=255)
                                                                                                                                   aagaaCTTGATGCCGTTGTCATCGGGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCgg                                                                                                                                                       <  2:1126385/181‑1 (MQ=255)
                                                                                                                                    agaaCTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGc                                                                                                                             >  1:729308/1‑206 (MQ=255)
                                                                                                                                            aggCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATc                                                                                                                                                                                                            <  2:60043/117‑1 (MQ=255)
                                                                                                                                               ccGTTGTCATCGTGCGGGTTGTGAGAGGCACTGATGACGATGCCGGCTGCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  2:119570/101‑1 (MQ=255)
                                                                                                                                                   tGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGt                                                                                                                                                                             <  2:1037485/143‑1 (MQ=255)
                                                                                                                                                   tGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAg                                                                                >  1:203438/1‑236 (MQ=255)
                                                                                                                                                       aTCGGGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGc                                                                                                                             <  2:474806/187‑1 (MQ=255)
                                                                                                                                                        tCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCGTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGaa                                                                                                                                                                  <  2:35956/149‑1 (MQ=255)
                                                                                                                                                        gcGTGCGGGATGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGccc                                                                                                                                                                                                                           <  2:386711/91‑1 (MQ=255)
                                                                                                                                                          gTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGGGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAAt                                                                                                                   >  1:303138/1‑194 (MQ=255)
                                                                                                                                                             cGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCAcgcg                                                                                                                        <  2:493222/186‑1 (MQ=255)
                                                                                                                                                                  tgtgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCa                                                                                 <  1:315046/220‑1 (MQ=255)
                                                                                                                                                                  tgtgCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTc                                                                       >  1:568523/1‑230 (MQ=255)
                                                                                                                                                                      cGAGGCACTGATGACGATGCCGGCTGCGGCGTGGAAGGTACGCGTGGGGTAAGCGATGGCCGGTGTcggcatcgtcatcagtgcctcgcacaacccgcacgatga                                                                                                                                                                                                >  1:942337‑M2/1‑66 (MQ=255)
                                                                                                                                                                        aGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGc                                                                               >  1:883767/1‑216 (MQ=255)
                                                                                                                                                                        aGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCCTGAAGt                                                             >  2:522513/1‑234 (MQ=255)
                                                                                                                                                                        aGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCa                                                           >  1:1015291/1‑236 (MQ=255)
                                                                                                                                                                         ggCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCa                                                           <  2:529127/235‑1 (MQ=255)
                                                                                                                                                                              tgatgaCGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAAt                                                                                                                   <  2:432956/174‑1 (MQ=255)
                                                                                                                                                                                 tgaCGGTGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATAcgcg                                                                                                                                              <  2:704128/144‑1 (MQ=255)
                                                                                                                                                                                 tgaCGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTTCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGaa                                                               >  1:714890/1‑223 (MQ=255)
                                                                                                                                                                                     gATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACAGGTAGCCGGAGATACGCGTGTCCtt                                                                                                                                       <  2:604135/147‑1 (MQ=255)
                                                                                                                                                                                       gtccGGCTTCGCCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGc                                                                                                                             <  2:669275/153‑1 (MQ=255)
                                                                                                                                                                                        gCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTAtt                                           >  1:403189/1‑236 (MQ=255)
                                                                                                                                                                                           ggCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCCATGGc                                                                                                                >  2:169169/1‑164 (MQ=255)
                                                                                                                                                                                            gCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAg                                                                     <  1:426200/206‑1 (MQ=255)
                                                                                                                                                                                               tCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCCCCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCAcgcg                                                                                                                        <  2:351218/152‑1 (MQ=255)
                                                                                                                                                                                                               gcgTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGt                                                                                                                                                             >  1:433691/1‑99 (MQ=255)
                                                                                                                                                                                                               gcgTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGt                                                                                                                                                             <  2:433690/99‑1 (MQ=255)
                                                                                                                                                                                                                  tGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCAttgccgc                                                                                       <  1:934815/166‑7 (MQ=255)
                                                                                                                                                                                                                    aGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGt               <  1:279448/236‑1 (MQ=255)
                                                                                                                                                                                                                      gTACGCGATGGCCGGTGTcggcatcgtcagcagtgcctcgcacaacccgcacgatgacaacggcatcaagttcttctcgggccagggcacc                                                                                                                                                              >  2:42544‑M2/1‑18 (MQ=255)
                                                                                                                                                                                                                                gCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGTACCAAAGTAtt    <  1:315053/235‑1 (MQ=255)
                                                                                                                                                                                                                                 ccGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGTACCAAAGTAtttt  <  1:503190/236‑1 (MQ=255)
                                                                                                                                                                                                                                  cGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGACGCCCAGCCAAGCTTCAGCATGAAGTCa                                                           >  1:85254/1‑178 (MQ=255)
                                                                                                                                                                                                                                       tCGGCACCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGt               <  1:331938/217‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                     
AGCGGCCGGCGGCATCGTTGATACGCGAAACCTTGCCCAGCTTGCCCGACTCGACAACGGTCATCGGTTGGTCGAGCAGCTCTTCGATCATCAGCTCGACCTCGTCCGGCAGCTTGGTGCCCTGGCCCGAGAAGAACTTGATGCCGTTGTCATCGTGCGGGTTGTGCGAGGCACTGATGACGATGCCGGCTTCGGCGTGGAAGGTACGCGTGAGGTAAGCGATGGCCGGTGTCGGCATCGGCCCGAGCAGCATCACATCGGCACCTGCCGCGGACAGGCCGGCTTCGAGTGCGGACTCGAACATGTAGCCGGAGATACGCGTGTCCTTGCCCACCAGCACGCGGCAATGGCCTTGCTTGCGGAAGGCCATGCCGGCCGCCCAGCCAAGCTTCAGCATGAAGTCAGGCGTGATCGGGTATTCGCCGACGCGGCCACGAATGCCGTCGGTACCAAAGTATTTT  >  AE015451/5363297‑5363757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.