New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5986679	66 (1.070)	3 (0.050)	3/328	NT	4.4%	coding (946/987 nt)	PP_5245	Transcriptional regulator, AraC family
	?	AE015451	= 5986783	69 (1.170)					intergenic (+63/‑136)	PP_5245/kefB‑III	Transcriptional regulator, AraC family/glutathione‑regulated potassium/H+ antiporter
Rejected: Frequency below/above cutoff threshold.

CGCAAGTTGCTCGAATGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGCAACTCGGTGCCG  >  AE015451/5986562‑5987015                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         cgcAAGTTGCTCGAATGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGa                                                                                                                                                                                                                             <  1:903223/235‑1 (MQ=255)       ttGCGCGAATGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGGTAGCACAGGCCTTGAGCCACGGTAAGCGCCGGCACCg                                                                                                                                                                                                                              >  2:623672/1‑228 (MQ=255)           tCGAATGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTg                                                                                                                                                                                                                  <  1:971992/236‑1 (MQ=255)              aaTGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAgcgccg                                                                                                                                                                                                                                    >  2:779678‑M2/1‑209 (MQ=255)                                tGAAGGTGGTGGCGGCGCAGTGCGGGTGTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGAAAATTTTTCTTccc                                                                                                                                                                                             <  1:697237/236‑1 (MQ=255)                                    ggtggtGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGa                                                                                                                                                                                                                             <  1:216358/200‑1 (MQ=255)                                                 cAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAga                                                                                                                                                                                       <  1:767178/225‑1 (MQ=255)                                                  aGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTaa                                                                                                                                                                                                                                          >  1:816296/1‑173 (MQ=255)                                                      cgcgTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTc                                                                                                                                                                                                                        <  2:501446/184‑1 (MQ=255)                                                        ggTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCcaca                                                                                                                                                                     <  1:33289/236‑1 (MQ=255)                                                         gTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCAccc                                                                                                                                                                                                                    >  1:829329/1‑186 (MQ=255)                                                           ttGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCcaca                                                                                                                                                                     <  2:408864/233‑1 (MQ=255)                                                               cAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGCTTGTCTGACGcc                                                                                                                                                                        >  1:485410/1‑226 (MQ=255)                                                                 gTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCt                                                                                                                                                             >  1:388981/1‑235 (MQ=255)                                                                      cGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAgcgccg                                                                                                                                                                                                                                    <  1:1089131‑M2/159‑7 (MQ=255)                                                                      cGACACATGCGCAAGGTATTCATTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTCTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAAt                                                                                                                                                       <  1:623673/236‑1 (MQ=255)                                                                                  aaGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGc                                                                                                                                                                         >  2:748084/1‑206 (MQ=255)                                                                                    ggTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTaa                                                                                                                                                                                                                                          >  2:1023444/1‑139 (MQ=255)                                                                                    ggTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAAt                                                                                                                                                       <  2:625410/222‑1 (MQ=255)                                                                                     gTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCATAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACt                                                                                                                                                                   <  2:602590/209‑1 (MQ=255)                                                                                           tttGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTggacaggacca                                                                                                                                                                                                        >  2:116126/1‑164 (MQ=255)                                                                                           tttGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGaa                                                                                                                                   >  1:874000/1‑235 (MQ=255)                                                                                             tGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGc                                                                                                                                <  1:732452/236‑1 (MQ=255)                                                                                                 cGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGcc                                                                                                                            >  1:1128552/1‑236 (MQ=255)                                                                                                      tGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGc                                                                                                                       <  1:1052497/236‑1 (MQ=255)                                                                                                           tGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTc                                                                                                                  <  1:886713/236‑1 (MQ=255)                                                                                                           tGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTc                                                                                                                  <  1:932796/236‑1 (MQ=255)                                                                                                                 cGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTAccc                                                                                                                                                               >  1:815316/1‑185 (MQ=255)                                                                                                                   gcgcAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCGCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGa                                                                                                                                                                                                                             <  2:895744/121‑1 (MQ=255)                                                                                                                     gcAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACg                                                                                                        >  1:428075/1‑236 (MQ=255)                                                                                                                           tCGGGCACATTTTGTGGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAgcgccggcgtcatgccaattcgctcaaagaataccttg                                                                                                                                                                                                    >  2:396656‑M2/1‑100 (MQ=255)                                                                                                                           tCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGCCAGATGATTGTCTGACGCCACACtc                                                                                                                                                                  >  2:1013855/1‑171 (MQ=255)                                                                                                                            cGGGCCCAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCcaca                                                                                                                                                                     <  2:200529/168‑1 (MQ=255)                                                                                                                             gggCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCaa                                                                                                  <  2:407531/234‑1 (MQ=255)                                                                                                                                ctcaGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACCCTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGa                                                                                                             <  1:325022/218‑1 (MQ=255)                                                                                                                                 acaGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCg                                                                                                                                     >  2:481701/1‑195 (MQ=255)                                                                                                                                  caGTGTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCGCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGAtt                                                                                                                                                                                  <  2:203292/149‑1 (MQ=255)                                                                                                                                      ttGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGcccc                                                                                                                          >  2:136911/1‑201 (MQ=255)                                                                                                                                      ttGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGcccc                                                                                                                          <  1:136911/201‑1 (MQ=255)                                                                                                                                      ttGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAg                                                                                                                     >  1:1023407/1‑206 (MQ=255)                                                                                                                                        ggtggCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCCGGTAAGCGCCGCCACCGCTTGTCACCCTg                                                                                                                                                                                                                  >  2:170804/1‑111 (MQ=39)                                                                                                                                        ggtggCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGa                                                                                        >  2:729014/1‑233 (MQ=255)                                                                                                                                          tggCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTggacag                                                                                                                                                                                                             <  2:630890/114‑1 (MQ=255)                                                                                                                                            gCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTc                                                                                                                  <  1:880324/203‑1 (MQ=255)                                                                                                                                                  aaCAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTTTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACgcaggcag                                                                                  >  1:88700/1‑229 (MQ=255)                                                                                                                                                  aaCAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCAttggt                                                                                                            >  1:181319/1‑199 (MQ=255)                                                                                                                                                           aTTGGCGCTGCCTTCTTCTTTAACGAGACGGCTCCCACAGGGATAGCCCAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGAtt                                                                                                                                                                                  <  2:768305/124‑1 (MQ=255)                                                                                                                                                               gcgcTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCgg                                                                                                                        >  2:1036100/1‑178 (MQ=255)                                                                                                                                                               gcgcTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGcg                                                                                                                   >  1:220983/1‑182 (MQ=255)                                                                                                                                                                          ggagcgGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACACTTTTTCTTCCCGTCAGATGATTGTCTGACGCcac                                                                                                                                                                      >  2:436035/4‑121 (MQ=255)                                                                                                                                                                          ggagcgGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCCgctga                                                                                                                                                                                    >  2:61313/4‑107 (MQ=255)                                                                                                                                                                              cgGGCGCGCCCGCGACCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGa                                                                                                                                                                                                                             <  2:65441/62‑1 (MQ=255)                                                                                                                                                                                   gcgcCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAAcc                                                                     >  1:1078051/1‑209 (MQ=255)                                                                                                                                                                                    cgcCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAgcgccggcgtcatgccaattcgctcaaagaataccttgcgcatgtgtcgg                                                                                                                                                                                        >  2:1103365‑M2/1‑43 (MQ=255)                                                                                                                                                                                    cgcCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAgcgccggcgtcatgccaattcgctcaaagaat                                                                                                                                                                                                          >  2:1097891‑M2/1‑43 (MQ=255)                                                                                                                                                                                      cccGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGCTCTTCCTGCTTGCCGCCGTCCTc                                       >  1:204431/1‑236 (MQ=255)                                                                                                                                                                                       cggCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTAcc                                                                                                                                                                <  2:1020884/112‑1 (MQ=255)                                                                                                                                                                                          cTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTTTCCGTAAAACTGTTCGAACGCTGCCCCGGCAGc                                                                                                                    <  1:1112875/155‑1 (MQ=255)                                                                                                                                                                                             ccACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGc                                                                                    <  2:731395/184‑1 (MQ=255)                                                                                                                                                                                                    gaTAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGa                                                                                                                                                                                                                             <  1:583491/40‑1 (MQ=255)                                                                                                                                                                                                     aTAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGa                                                                                                             <  2:558972/151‑1 (MQ=255)                                                                                                                                                                                                     aTAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATCGTCACTCTGGACAGGACAATTTTTCTCCCCGTCAGATGATTGTCTGACGCCACACTCCCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCg                                      <  1:328433/222‑1 (MQ=255)                                                                                                                                                                                                       aGCACAGGCCTTGAGCCCAGTTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGcc                        <  1:846608/234‑1 (MQ=255)                                                                                                                                                                                                        gCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGAtt                                                                                                                                                                                  <  1:687155/79‑1 (MQ=255)                                                                                                                                                                                                        gCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGAtt                                                                                                                                                                                  >  2:687154/1‑79 (MQ=255)                                                                                                                                                                                                        gCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCgg                                                                 >  2:1037315/1‑192 (MQ=255)                                                                                                                                                                                                          acaGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGCTCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAgct                   >  1:398323/1‑235 (MQ=255)                                                                                                                                                                                                                cTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGaa                                                                                                                                   >  1:732146/1‑118 (MQ=255)                                                                                                                                                                                                                cTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGaa                                                                                                                                   <  2:732145/118‑1 (MQ=255)                                                                                                                                                                                                                cTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACcgcg                                                                  <  1:758610/183‑1 (MQ=255)                                                                                                                                                                                                                cTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACcgcg                                                                  >  2:758609/1‑183 (MQ=255)                                                                                                                                                                                                                cTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGc              >  1:449925/1‑235 (MQ=255)                                                                                                                                                                                                                 ttGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTgga                                                                                                                                                                                                                >  2:583490/1‑40 (MQ=255)                                                                                                                                                                                                                 ttGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAACCTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCCCACGACGGCAGCCTGCt                                                                            >  2:48205/1‑172 (MQ=255)                                                                                                                                                                                                                 ttGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTc                                          >  2:1037092/1‑206 (MQ=255)                                                                                                                                                                                                                 ttGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGCaa            >  1:878368/1‑236 (MQ=255)                                                                                                                                                                                                                 ttGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGCCCTCGCCGTCCCCCTGGCCAcgcg                   >  2:719070/1‑229 (MQ=255)                                                                                                                                                                                                                  tGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCCCACGAAGGCAGCCTTCGGCAAACcgcg                                                                  >  2:963517/1‑181 (MQ=255)                                                                                                                                                                                                                      cccAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTg               >  1:25478/1‑228 (MQ=255)                                                                                                                                                                                                                      cccAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGCAACTCg        <  1:232910/235‑1 (MQ=255)                                                                                                                                                                                                                       ccAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGcccc                                                                                                                          <  2:1086194/120‑1 (MQ=255)                                                                                                                                                                                                                        cAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAgcgc                  <  2:1008128/223‑1 (MQ=255)                                                                                                                                                                                                                           gTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGCAACTCGGTGCCg  >  1:84071/1‑236 (MQ=255)                                                                                                                                                                                                                            tAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGc              >  2:621925/1‑223 (MQ=255)                                                                                                                                                                                                                             aaGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTc                                                                                                                                                   >  2:703562/1‑89 (MQ=255)                                                                                                                                                                                                                             aaGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCggg                                                                >  2:299649/1‑171 (MQ=255)                                                                                                                                                                                                                             aaGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGc                                     >  2:1119863/1‑199 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         CGCAAGTTGCTCGAATGCGGTGACCTGCCGATGAAGGTGGTGGCGGCGCAGTGCGGGTTTGGCAGTGACCGACACATGCGCAAGGTATTCTTTGAGCGAATTGGCATGACGCCGGCGCAGTATCGGGCACAGTTTGGTGGCGGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCTGGCCAAGCGCCTGCAACTCGGTGCCG  >  AE015451/5986562‑5987015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.