New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1870524 =	69 (0.970)	4 (0.060)	4/332	NT	6.0%	coding (714/924 nt)	cobD	Subunit of adenosylcobinamide‑phosphate synthase beta component
	?	AE015451	1870585 =	60 (0.890)					coding (775/924 nt)	cobD	Subunit of adenosylcobinamide‑phosphate synthase beta component

GCTGCACCGCGCGTAACAGGCGGCCACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1870766‑1870524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccggcgGTGTACCACGGCGAACTGCATGAGCGGCCGCGTCTGGGCGAGGGGCCAGTGGCCGATGCCGATGCCATCGAGCGCGGCTGGCAGCTGGTGCAGCGCGGCGTGTGGCTGTGGCTGCTGGTGATCTGCCTGGGGGCCTATATCAATGCTTGAACATGGTGGCCGCCTGTTACGCGCGGTGCAGCAATACGGTATCCCCCGTGAGCAGTGGCTCGACCTGTCCAGCGGCATTGC  >  AE015451/1870585‑1870815                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTGCACCGCGCGTAACAGGCGGCCACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGG                                                                                                                                                                                                                                                >  1:1204473/1‑236      ACCGCGCGTAACAGGCGGCCACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGG                                                                                                                                                                                                                                           <  1:1036351/236‑1      ACCGCGCGTAACAGGCGGCCACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGG                                                                                                                                                                                                                                           <  1:443104/236‑1                         CACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCGGTGggg                                                                                                                                                                                                                                   >  1:115723/1‑222                          ACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCG                                                                                                                                                                                                                                                 >  1:272599/1‑210                                                 GCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCGGTGTACCACG                                                                                                                                                                                                                               <  2:1174173/205‑1                                                 GCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCG                                                                                                                                                                                                                                                 <  2:1057255/187‑1                                                         GCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGG                                                                                                                                                                                                                                           >  1:308112/1‑185                                                                              CCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGG                                                                                                                                                                                                                                           >  2:923954/1‑164                                                                                   CGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGCTGGCATCGGCATCGGCCACTGGCACCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCGGTGGTACGCCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGG                                                                                                                                                                                                                                                <  2:1090474/154‑1                                                                                     CCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCCGCGct                                                                                                                                                                                                                                       >  2:435184/1‑159                                                                                         GCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCCGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGG                                                                                                                                                                                                                                           >  1:890143/1‑153                                                                                                                                CGGCCACTGGCCCCTCGCCCAGCCGCGGCCGCTCATGCAGTTCGCCGGGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCGGT                                                                                                                                                                                                                                       <  2:376882/118‑1                                                                                                                                                                           GCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCGGTGTACCACGGCGAACTGCATGAGCGGCCGCGTCTGGGCGAGGGGCCAGT                                                                                                                                                                                       <  1:1094492/123‑1                                                                                                                                                                                     ACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCGGTGTACCACGGCGAACTGCA                                                                                                                                                                                                                     <  2:236717/83‑1                                                                                                                                                                                                    AGCTCCACGCCCAGCGCCCCGGCGCCGGCAGCCATCACCGGCCCGGCGGTGTACCACGGCGAACTGAATGAGC                                                                                                                                                                                                                <  1:393169/73‑1                                                                                                                                                                                                                                                gttGGTGTACCACGGCGAACTGCATGAGCGGCCGCGTCTGGGCGAGGGGCCAGTGGCCGATGCCGATGCCATCGAGCGCGGCTGGCAGCTGGTGCAGCGCGGCGTGTGGCTGTGGCTGCTGGTGATCTGCCTGGGGGCCTATATCAATGCTTGAACATGGTGGCCGCCTGTTACGCGCGGTGCAGCAATACGGTATCCCCCGTGAGCAGTGGCTCGACCTGTCCAGCGGCATTGC  <  1:1264260/232‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTGCACCGCGCGTAACAGGCGGCCACCATGTTCAAGCATTGATATAGGCCCCCAGGCAGATCACCAGCAGCCACAGCCACACGCCGCGCTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCGCCGTGGTACACCGCCGGGCCACCAAGCTCCACGCCCAGCGCACCGGCGCCGGCAGCCATCACCGGCCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/1870766‑1870524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccggcgGTGTACCACGGCGAACTGCATGAGCGGCCGCGTCTGGGCGAGGGGCCAGTGGCCGATGCCGATGCCATCGAGCGCGGCTGGCAGCTGGTGCAGCGCGGCGTGTGGCTGTGGCTGCTGGTGATCTGCCTGGGGGCCTATATCAATGCTTGAACATGGTGGCCGCCTGTTACGCGCGGTGCAGCAATACGGTATCCCCCGTGAGCAGTGGCTCGACCTGTCCAGCGGCATTGC  >  AE015451/1870585‑1870815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.