New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 1920720 = | 41 (0.570) | 3 (0.040) | 3/336 | NT | 7.9% | coding (158/963 nt) | PP_1720 | Alcohol dehydrogenase, zinc‑containing |
? | AE015451 | 1920741 = | 31 (0.450) | coding (179/963 nt) | PP_1720 | Alcohol dehydrogenase, zinc‑containing |
GCAACGCTGCCGCCTCATGCAGGCCAAGGCCTTCGGGTACCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1920908‑1920720 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCAGCGTTGCCGGAGGTGTATGCCACCGCCTGGCTGAACATCTTCCAGCTCGGTGCAGTGAAGGCTGGCGAGAAG > AE015451/1920741‑1920973 GCAACGCTGCCGCCTCATGCAGGCCAAGGCCTTCGGGTACCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACCCCAGCCCCATGTATG > 2:1151579/1‑183 GGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGTTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTATGGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCT < 1:29102/155‑1 CGGAACACTCCAGCCCCATGTATGGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTT < 1:1263987/93‑1 CGGAACACTCCAGCCCCATGTATGGGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTT > 2:1263982/1‑93 GGCTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCAGCGTTGCCGGAGGTGTATGCCACCGCCTG < 2:471856/196‑1 CTGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCA > 2:1076349/1‑165 TGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCAGCGTTGCCGGAGGTGTCTGCCACCGCCTGGCTGAACATCTTCCA > 1:106129/1‑208 TGGAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCAGCGTTGCCGGAGGTGTATGCCACCGCCTGGCTGAACATCTTCCAGCTCGGTGCAGTGAAGGCTGGCGAGAAG > 1:99365/1‑236 GCAACGCTGCCGCCTCATGCAGGCCAAGGCCTTCGGGTACCGGCAATACGTGACGGGCATCGACCACCACTTCCTCGGCCATGGCGCCGCTGGCCAGCAGGGCGCAAACGCGGTCACCCACGCGCCAGGCGGCACCAGCCCCCACCTCTTCAACCACCCCGGAACACTCCAGCCCCATGTATGGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1920908‑1920720 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctggAGTGTTCCGGGGTGGTTGAAGAGGTGGGGGCTGGTGCCGCCTGGCGCGTGGGTGACCGCGTTTGCGCCCTGCTGGCCAGCGGCGCCATGGCCGAGGAAGTGGTGGTCGATGCCCGTCACGTATTGCCGGTACCCGAAGGCCTTGGCCTGCATGAGGCGGCAGCGTTGCCGGAGGTGTATGCCACCGCCTGGCTGAACATCTTCCAGCTCGGTGCAGTGAAGGCTGGCGAGAAG > AE015451/1920741‑1920973 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |