New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2986915 = | NA (NA) | 5 (0.070) | 4/334 | NT | 10.4% | coding (1484/2991 nt) | PP_2612 | conserved membrane protein of unknown function |
? | AE015451 | 2986959 = | 45 (0.630) | coding (1440/2991 nt) | PP_2612 | conserved membrane protein of unknown function |
GGCTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTcggcgcca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2987148‑2986915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGT > AE015451/2986959‑2987200 GGCTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTC < 1:1112312/235‑1 CTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGC > 1:790018/1‑236 CTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGG > 1:1283705/1‑235 CTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCG > 2:786001/1‑234 CTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTC > 2:1082905/1‑233 GCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGCTTCGATCGGCACCTTGTTCGGCGC > 1:129155/1‑236 GCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGC > 1:702385/1‑236 ACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATATCACTGGCGTTGCTGCTTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCCGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCG > 1:548550/1‑227 TGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGG < 2:614955/226‑1 TTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGG < 1:224941/219‑1 TACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCG < 2:925944/217‑1 CCGCCCGCGGTCTGGAAATCTCCCTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGC < 1:381968/236‑1 GCAATGGCCGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGC < 1:238195/136‑1 TTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGG > 1:1003534/1‑67 TTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGG < 2:1003529/67‑1 ACCGCCTGGGCGCCGTTCACCCCGTTCAAGGACAAAGCCGATTCGCTCGGCACCTTGTTCGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATC < 1:1054489/137‑1 CCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGT > 2:1266584/1‑131 CCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTCGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGT < 1:1266589/131‑1 AGGACAAAGCCGATTCGATCGGCACCTTGTTCGGC > 1:1254765/1‑35 agCGGCGCCAAGGCGCTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTA < 1:393709/205‑1 CAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTG < 1:327985/93‑1 CAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTG > 2:327980/1‑93 CAAGGCGGTGTAAAGCGGGCTGTCGTGCGGGTCCAGCCATTGCTCCAGGCG > 2:190525/1‑51 AAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGT > 1:24439/1‑235 AAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAG < 2:309425/181‑1 GGCTGCGGCACTGGCCTGTTACGACCGCGACGAACGCACCTCCGCCCGCGGTCTGGAAATCTCACTGGCGTTGCTGATTCACCCAATGGGCCAGCCGACACCCGGCACAGAAGATCATGACCGGCGTTTCAAACGCCTGGAGCAATGGCTGGACCAGCACGACAGCCCGCTTTACACCGCCTTGGCGCCGTTCAACCCGTTCAAGGACAAAGCCGATTCGATCGGCACCTTGTTcggcgcca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2987148‑2986915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGCCAAGGCGGTGTAAAGCGGGCTGTCGTGCTGGTCCAGCCATTGCTCCAGGCGTTTGAAACGCCGGTCATGATCTTCTGTGCCGGGTGTCGGCTGGCCCATTGGGTGAATCAGCAACGCCAGTGAGATTTCCAGACCGCGGGCGGAGGTGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGT > AE015451/2986959‑2987200 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |