New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4355162 | 70 (0.980) | 3 (0.040) | 3/334 | NT | 4.2% | coding (362/681 nt) | modB | Molybdenum transport system permease protein ModB |
? | AE015451 | = 4355227 | 69 (1.010) | coding (427/681 nt) | modB | Molybdenum transport system permease protein ModB | |||||
Rejected: Frequency below/above cutoff threshold. |
GCCGTTCGTGGTGCAACCCCTGCAGAATGCCTTTGGCGCGATCGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4355112‑4355162 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGTAGCGGCGACTTCCAGGGGGCGCTGGCCGATCGCGCCAAAGGCATTCTGCAGGGGTTGCACCACGAACGGCATGGAGTACACCGTCGAGCCAATCACCAGGCCTGTGAAGCTGAACACCACACTGCCCAGGCCTAGCGCCTGGGTGGCCTGACCAAGCCAGCCGTG < AE015451/4355227‑4355017 GCCGTTCGTGGTGCAACCCCTGCAGAATGCCTTTGGCGCGATCGGCCAGCGGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGTAGCGGCGACTTCCAGGGGGCGCTGGCCGATCGCGCCAAAGGCATTCTGCAGGGGTTGCACCACG > 1:36528/1‑161 GTTCGTGGTGCAACCCCTGCAGAATGCCTTTGGCGCGATCGGCCAGCGGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGTAGCGGCGACTTCCAGGGGGCGCTGGCCGATCGCGCCAAAGGCATTCTGCAGGGGCTGCACCACGAACG > 1:740924/1‑162 GTGGTGCAACCCCTGCAGAATGCCTTTGGCGCGATCGGCCAGCGGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGGAGC > 2:136490/1‑93 GCGGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGTAGCGGCGACTTCCAGGGGGCGCTGGCCGATCGCGCCAAAGGCATTCTGCAGGGGTTGCACCACGAACGGCATGGAGTACACCGTCGAGCCAATCACCAGGCCTGTGAAGCTGAACACCACACTGCCCAGGCCTAGCGCCTGGGTGGCCTGACCAAGCCAGCCGTG > 2:706020/1‑214 GCCGTTCGTGGTGCAACCCCTGCAGAATGCCTTTGGCGCGATCGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4355112‑4355162 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgGCAGCACCACATGAACGAAGGTATCCCATGGGCTGGCTCGCAGAGTAGCGGCGACTTCCAGGGGGCGCTGGCCGATCGCGCCAAAGGCATTCTGCAGGGGTTGCACCACGAACGGCATGGAGTACACCGTCGAGCCAATCACCAGGCCTGTGAAGCTGAACACCACACTGCCCAGGCCTAGCGCCTGGGTGGCCTGACCAAGCCAGCCGTG < AE015451/4355227‑4355017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |