| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 4791897 | 68 (0.950) | 3 (0.040) | 3/334 | NT | 4.0% | coding (1943/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
| ? | AE015451 | = 4791939 | 80 (1.170) | coding (1901/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4791659‑4791897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcccgTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTCGGGCACCACCGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCT < AE015451/4791939‑4791810 CGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGC < 1:39709/236‑1CGACAGGGAGGCGGCGAAACCGTCGGCATCGAGCCCCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGC < 1:147219/236‑1 GACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTG < 2:1200622/234‑1 GACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTG < 2:586593/234‑1 CAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCC < 1:298913/235‑1 CCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTC < 2:1136051/183‑1 CCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATGGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCC < 1:704293/139‑1 AGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTCGGGCA > 1:671481/1‑136 AGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTCGGGCA < 2:671476/136‑1 gcagGTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTCGGGCACCACCGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCT < 1:800850/131‑1 CCCGTGGCGGTTCTCTCCGGCA > 2:221317/1‑22 CGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4791659‑4791897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcccgTGGCGGTTCACTCCGGCAACCTGGCTTATGTGATCTACACCTCGGGCACCACCGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCT < AE015451/4791939‑4791810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |