New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4022445	47 (0.660)	4 (0.060)	4/330	NT	8.9%	intergenic (‑140/+528)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit
	?	AE015451	4022664 =	38 (0.560)					intergenic (‑359/+309)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit

ATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACG  >  AE015451/4022220‑4022668                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                atctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGAAGGGAGCGCAGCGTTTTTGGGTTACTTTTTGTCGCGttt                                                                                                                                                                                                                           >  1:17696/1‑232 (MQ=25)                              gatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAggg                                                                                                                                                                                                  <  2:885475/228‑1 (MQ=31)                                                      aaCGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCaa                                                                                                                                                                    >  2:686807/1‑234 (MQ=37)                                                                ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGc                                                                                                                                                                                                          <  1:1023841/186‑1 (MQ=31)                                                                ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCg                                                                                                                                                                                                        <  2:862604/188‑1 (MQ=31)                                                                ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCg                                                                                                                                                                                                        >  1:862609/1‑188 (MQ=31)                                                                                    cATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGGCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGt                                                                                                                                    <  1:1142870/236‑1 (MQ=255)                                                                                      tGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGtt                                                                                                                                                          <  1:7063/212‑1 (MQ=38)                                                                                               gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTGTGACAAGACGTGACTCGcc                                                                                                                                                                                                         >  1:448998/1‑156 (MQ=9)                                                                                                tCAAGCGCTG‑GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCAGTAAGGGCGAAAAGGTg                                                                                                                                                                                        >  1:744160/1‑171 (MQ=11)                                                                                                  cgcgccgaaGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACACGCCGTAAGGGc                                                                                                                                                                                                 >  1:1037954/9‑161 (MQ=9)                                                                                                   aGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCg                                                                                                                                                                                                <  2:1200732/161‑1 (MQ=32)                                                                                                             ccccAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgcttcttgcttcttgc                                                                                                           >  1:210698/1‑236 (MQ=255)                                                                                                                               ggCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccg                                                                                                                                                 <  1:804770‑M1/180‑81 (MQ=255)                                                                                                                               ggCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGa                                                                                                                                      <  2:512480/191‑1 (MQ=40)                                                                                                                                gcgcGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCCAacg                                                                                                                                                                 >  1:1057020/1‑163 (MQ=25)                                                                                                                                gcgcGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgcttcttg                                                                                                                   >  2:312446/1‑209 (MQ=255)                                                                                                                                 cgcgGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAGTCGCCGCAAGGGCGaaaa                                                                                                                                                                                            >  1:723533/1‑135 (MQ=17)                                                                                                                                        cTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTc                                                                                 <  1:312450/235‑1 (MQ=255)                                                                                                                                        cTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTc                                                                                 <  1:686812/235‑1 (MQ=255)                                                                                                                                          gCCGGGAGCAAGGCCGGAGTGAGGGAAGCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgcttcttgcttcttgcttcttgc                                                                                                    <  1:1127581/214‑1 (MQ=255)                                                                                                                                                  cAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcg                                                                                                                                                                                                                                >  1:528514/1‑82 (MQ=33)                                                                                                                                                   aaGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGTTTACTTTTTGTcgc                                                                                                                                                                                                                               >  2:480745/1‑82 (MQ=18)                                                                                                                                                   aaGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccgggcttgctcccgggaggaccgcg                                                                                                                          >  2:749669‑M1/1‑80 (MQ=255)                                                                                                                                                     ggCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccggg                                                                                                                                               <  1:699882‑M1/160‑83 (MQ=255)                                                                                                                                                     ggCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTc                                                                                 <  1:554259/222‑1 (MQ=255)                                                                                                                                                         ggggcgAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTat                                                                  <  2:1199529/228‑1 (MQ=255)                                                                                                                                                         ggAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCTTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgcttcttgcttcttgct                                                                                                          <  1:8902/193‑1 (MQ=255)                                                                                                                                                             ggAGGGACCCCCGGAGCGCGGCGCGGGGGCGGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCg                                                                           <  1:367493/219‑1 (MQ=255)                                                                                                                                                                  gAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCa                                                                                                                               <  2:638298/163‑1 (MQ=255)                                                                                                                                                                  gAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGGTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTc                                                                                                                                                                                                            >  1:270570/1‑86 (MQ=17)                                                                                                                                                                   aaCCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccgggcttgctcccgggaggaccgcgctgcaggcc                                                                                                                 >  2:840923‑M1/1‑64 (MQ=255)                                                                                                                                                                     ccccGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTg                                                   <  1:994249/236‑1 (MQ=255)                                                                                                                                                                      cccGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCg                                                                           <  1:363058/211‑1 (MQ=255)                                                                                                                                                                       ccGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAg                                                                                                                                                   >  2:515672/1‑138 (MQ=40)                                                                                                                                                                       ccGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGgc                                                 <  1:487850/236‑1 (MQ=255)                                                                                                                                                                          gAGCGCAGCGCAGGGGCCGGATGAGGGGAGCGCAGCGTTGTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGAt                                                                                           <  2:17695/191‑1 (MQ=255)                                                                                                                                                                            gcgcagcgcaGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGACAAGGTGGGTCAGCGTCGc                                                                                                                                                                            >  1:1147861/1‑108 (MQ=12)                                                                                                                                                                             cgcagcgcagGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATa                                            <  1:1208219/235‑1 (MQ=255)                                                                                                                                                                                  cgcagGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAg                                                                      <  2:210695/204‑1 (MQ=255)                                                                                                                                                                                  cgcagGGGCCGGATGATAGGAGC‑CAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGAtgtt                                                                                        >  2:872962/1‑184 (MQ=255)                                                                                                                                                                                             gatgatGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgct                                                                                                                        <  2:1084680/143‑1 (MQ=255)                                                                                                                                                                                             gatgatGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgct                                                                                                                        >  1:1084685/1‑143 (MQ=255)                                                                                                                                                                                               tgatgGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGCGTCAAAACAGACGAGTTCGGAtcttgcttcttgct                                                                                                                 >  1:984262/1‑148 (MQ=255)                                                                                                                                                                                                          cAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACg                                                         <  2:1037949/193‑1 (MQ=255)                                                                                                                                                                                                           aGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCgg                                                                          >  2:148638/1‑174 (MQ=255)                                                                                                                                                                                                           aGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTAttcattca                                                           >  1:208630/1‑190 (MQ=255)                                                                                                                                                                                                           aGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGCAGGTagtcattc                                                            >  1:444342/1‑189 (MQ=255)                                                                                                                                                                                                             cGTTTTTTGGTTACTTTGTGTCGCGTTTGCCGAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCAtcttgcttcttgcttcttgcttcttgc                                                                                                    <  2:340948/147‑1 (MQ=255)                                                                                                                                                                                                              gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCa                                                       <  2:1059203/191‑1 (MQ=255)                                                                                                                                                                                                              gTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTAcggcg                     >  1:176183/1‑225 (MQ=255)                                                                                                                                                                                                                 ttttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCAccc                                     <  2:1154428/206‑1 (MQ=255)                                                                                                                                                                                                                   ttGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTTCTGGTTGGGGGc                                                                                     >  2:856349/1‑156 (MQ=255)                                                                                                                                                                                                                       ttACTTTTTGTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacct                                                                    <  1:1119856‑M1/169‑158 (MQ=255)                                                                                                                                                                                                                           ttcttgtcaaacgcgacaaaaagtaaccaaaaaccgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcaagc                                                                    <  2:675610‑M1/162‑158 (MQ=255)                                                                                                                                                                                                                               tGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCAccc                                     <  2:948258/192‑1 (MQ=255)                                                                                                                                                                                                                                gTCaaacgcgacaaaaagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccgggcttgctcccgggaggaccgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctcccttcgccagcccttcgctcggcctcctgaagtcgcactccgcggcgcctgggctatcgcgcgct  >  1:82815‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                ATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACG  >  AE015451/4022220‑4022668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.