New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4022445	47 (0.660)	4 (0.060)	4/330	NT	8.9%	intergenic (‑140/+528)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit
	?	AE015451	4022664 =	38 (0.560)					intergenic (‑359/+309)	PP_3547/emrB	putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit

AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCT  >  AE015451/4022455‑4022886                                                                                                                                                                                                                   |                                                                                                                                                                                                                                aaaaaGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAAc                                                                                                                                                                                                                              >  2:1261860/1‑213 (MQ=255)           tCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCt                                                                                                                                                                                               >  1:917113/1‑233 (MQ=255)                  aaGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAAcgc                                                                                                                                                                                                                            >  1:636105/1‑198 (MQ=255)                                           gCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGTGGGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGa                                                                                                                                                                                                                          >  1:484872/1‑176 (MQ=255)                                                   aaaCGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTgcg                                                                                                                                                                           >  2:600476/1‑213 (MQ=255)                                                                   taGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAAGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAAc                                                                                                                                                                                                       <  1:515677/169‑1 (MQ=255)                                                                        aaaaCAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTT‑GCTCCTATCATCCGGCCCCtt                                                                                                                                                                             >  2:1069037/1‑189 (MQ=255)                                                                                    tgcGCATCTTGCTGCTTGCTTCTTGCTGCTTGGTTCTTGGATGT‑GGGCAGTCGCATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTGCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc                                                                                                                                                                                                     <  2:225912/153‑1 (MQ=14)                                                                                       gCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGccc                                                                                                                >  1:720504/1‑236 (MQ=255)                                                                                                ttcttgcttcttgcttcttgcttcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGggag                                                                                                                                 >  1:28439/1‑210 (MQ=40)                                                                                                 tcttgcttcttgcttcttgcttcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAACCGCTG‑GCTCCTATCATCCGGccc                                                                                                                                                                                >  2:950473/1‑162 (MQ=39)                                                                                                         cttgcttcttgcttcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCgcgc                                                                                                                         <  1:381763/209‑1 (MQ=255)                                                                                                               ggcgcggtcctgccgggagcaaggccggagtgagggaaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCg                                                                                                                                                 <  1:804770‑M2/80‑1 (MQ=255)                                                                                                                   gcttcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCg                                                                                                                                     >  1:1111991/1‑187 (MQ=255)                                                                                                                      tcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTgcg                                                                                                                                                                           <  2:744155/146‑1 (MQ=39)                                                                                                                      tcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATc                                                                                  >  1:1142360/1‑235 (MQ=255)                                                                                                                      tcttgGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAAACaaaa                                                                                                                                                                                                          >  2:381758/1‑116 (MQ=255)                                                                                                                                   gCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGa                                                                                          <  2:720499/215‑1 (MQ=255)                                                                                                                                   aaggccggagtgagggaaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACcgcg                                                                                                                          >  2:749669‑M2/81‑183 (MQ=255)                                                                                                                                     ggccggagtgagggaaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCggg                                                                                                                                               <  1:699882‑M2/82‑1 (MQ=255)                                                                                                                                     aTTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                                                                                                                                         >  1:207484/1‑103 (MQ=255)                                                                                                                                     aTTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa                                                                                                                                                                                                         <  2:207481/103‑1 (MQ=255)                                                                                                                                     aTTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGcc                                                                                                                                                                                                    >  2:116661/1‑107 (MQ=255)                                                                                                                                     aTTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCt                                                                                             >  1:755899/1‑210 (MQ=255)                                                                                                                                      ctCATATCGAGTAGGTATTCGTTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGGCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGc                                                                                                                                              <  1:611484/159‑1 (MQ=255)                                                                                                                                           aTCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGggagga                                                                                                                               <  1:148641/170‑1 (MQ=255)                                                                                                                                               aGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCtt                                                                                                                                            <  2:514523/153‑1 (MQ=255)                                                                                                                                                  aGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGc                                                        >  2:443441/1‑234 (MQ=255)                                                                                                                                                   aaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGcc                                                                                                                 >  2:840923‑M2/65‑176 (MQ=255)                                                                                                                                                      atttattcACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCtt                                                                                                                                            <  1:678048/146‑1 (MQ=255)                                                                                                                                                       ttcattcaCGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGTCCCCATCCTGGGGCCCAg                                                                                                 >  1:445469/1‑188 (MQ=255)                                                                                                                                                               cGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCggg                                                                                                                                               <  2:859654/134‑1 (MQ=39)                                                                                                                                                                  aGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATcc                                                                                 >  2:1009460/1‑193 (MQ=255)                                                                                                                                                                  aGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAAGAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCCGCGCCACGCCCCGGGGGTCCCCCGccc                                                                                                                                                   >  2:329240/1‑125 (MQ=11)                                                                                                                                                                              gTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTgc                                                   <  1:1261865/211‑1 (MQ=255)                                                                                                                                                                               tCACCGTGCCGCCCTTACGGCGGGTCCCTTTTTGTCAAACGCGACAAAAAGTACCCAAAAACCGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCgcgc                                                                                                                         <  1:315835/140‑1 (MQ=14)                                                                                                                                                                                    cTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCgcggcg                    >  1:792060/1‑236 (MQ=255)                                                                                                                                                                                     ttCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCCGCGCt                                                >  2:571388/1‑207 (MQ=255)                                                                                                                                                                                       ccGCCCTTATGGCGGGTCACTTTTTCTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACcgcg                                                                                                                          <  1:840108/131‑1 (MQ=255)                                                                                                                                                                                         gCCCTTTCGGTGGGTCACTTTTTGGCAAACGCCACAAAAAGTAACCAAAATGCGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGc                                                                                                                                              <  2:283375/109‑1 (MQ=11)                                                                                                                                                                                            cTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTg                                      >  2:683076/1‑210 (MQ=255)                                                                                                                                                                                                 ggctgGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCg                                                                                                                                                 <  1:869521/98‑1 (MQ=18)                                                                                                                                                                                                 ggcgaGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGCAGGACCGCGCTGCAGGCCCCATCCTGGCGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTAt          >  2:560001/1‑234 (MQ=255)                                                                                                                                                                                                  gcgagTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCtt                                                               >  1:803673/5‑179 (MQ=255)                                                                                                                                                                                                  gcgagTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCtt                                                               <  2:803668/175‑1 (MQ=255)                                                                                                                                                                                                      gTCACTTTTTGTCCGACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCGCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATc                                                                                                            <  2:833574/130‑1 (MQ=255)                                                                                                                                                                                                       ttactttttgtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCt                                                                    <  1:1119856‑M2/157‑1 (MQ=255)                                                                                                                                                                                                        cACTTTTTGTCAAACGCGACAAAAAGTAACCAAGAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCAGCGCTCGGCATCCTGAAGTCGCAATCCgcggtg                    >  2:1214646/1‑214 (MQ=255)                                                                                                                                                                                                           ttcttgtcAAACGCGACAAAAAGTAACCAAAAACCGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCgtcaagc                                                                    <  2:675610‑M2/157‑4 (MQ=255)                                                                                                                                                                                                                gtcAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCCAGCCCTTCGCTCGGCCTCCTGAAGTCGCACTCCGCGGCGCCTGGGCTATCGCGCGCt  >  1:82815‑M2/4‑226 (MQ=255)                                                                                                                                                                                                                   aaaCGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGt                                                                         >  2:676358/1‑152 (MQ=255)                                                                                                                                                                                                                   |                                                                                                                                                                                                                                AAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATCTTGCTTCTTGCTTCTTGCTTCTTGCTTCTTGGATGT‑GGGCATTCACATCGAGTAGGTATTCATTCACGCAGGTGGCGCATAGTCACCCTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTG‑GCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCCGCGGCGCCTGGGCTATCGCGCGCT  >  AE015451/4022455‑4022886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.