New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 1042953 =69 (0.970)4 (0.060) 4/330 NT 6.0% coding (763/1311 nt) colS integral membrane sensor signal transduction histidine kinase
?AE015451 1043012 = 61 (0.910)coding (822/1311 nt) colS integral membrane sensor signal transduction histidine kinase

CGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCGACAGTGGGTATATCCGCCTGAGCCTGGAAG  >  AE015451/1042800‑1043247
                                                                                                                                                                                                                    |                                                                                                                                                                                                                                           
cGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGtga                                                                                                                                                                                                                                     >  2:1035208/1‑221 (MQ=255)
  ccTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGt                                                                                                                                                                                                                    >  1:1119198/1‑236 (MQ=255)
     gCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGGGTGGGGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCAc                                                                                                                                                                                                                 >  1:690803/1‑236 (MQ=255)
                   cccGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGtg                                                                                                                                                                                                                                      >  1:1037292/1‑201 (MQ=255)
                     cgcgAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCCCGGGCg                                                                                                                                                                                                            >  1:1154725/1‑225 (MQ=255)
                                gcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcccgctgcgcgcgggccaacatgaggaaggtcttgaccagctcgcgcatctcttcggtggcccgcgcGCAGCGTGATGAGGGGGc                                                                                                                                                                                                                            <  1:584140‑M2/18‑1 (MQ=255)
                                          gACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGc                                                                                                                                                                                                                      <  2:732868/194‑1 (MQ=255)
                                           aCGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAgggg                                                                                                                                                                                                                              >  2:1146564/1‑185 (MQ=255)
                                                  ccACGAGCTGCGCACGCCGTTGCTGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGc                                                                                                                                                                                                                      <  2:495229/186‑1 (MQ=255)
                                                              cACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCa                                                                                                                                                           <  2:1119193/233‑1 (MQ=255)
                                                               aCGCCGTTGAGGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGAGGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGc                                                                                                                                                                                                                      <  2:412992/173‑1 (MQ=255)
                                                                  ccGTGGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCggg                                                                                                                                                                           <  2:713149/213‑1 (MQ=255)
                                                                       gagggTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCGCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGcc                                                                                                                                                                                          <  1:357001/190‑1 (MQ=255)
                                                                        agggTGTTGGCTGCCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAgg                                                                                                                                              <  1:305357/234‑1 (MQ=255)
                                                                            tgtTGGCTGCCGCGTGTGAGCTTCTGATGGAACACCCTGGCCTCGATGCCCGCGCGCGTAGCCGGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  1:250294/236‑1 (MQ=255)
                                                                             gtTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  1:476087/235‑1 (MQ=255)
                                                                                        cGTGTGCGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCACGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGcgcg                                                                                                                                                                                                  <  1:350114/168‑1 (MQ=255)
                                                                                         gtgtGAGCTTCTGCTGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGc                                                                                                                                                                    >  2:593521/1‑197 (MQ=255)
                                                                                         gtgtGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCg                                                                                                                             >  1:596961/1‑236 (MQ=255)
                                                                                            tgAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGAt                                                                                                                           <  1:1241109/235‑1 (MQ=255)
                                                                                             gAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTgcgc                                                                                                                                                                                                   >  2:601687/1‑162 (MQ=255)
                                                                                             gAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCt                                                                                                                                                                                  >  2:199608/1‑179 (MQ=255)
                                                                                              aGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                                                                                    <  1:593526/208‑1 (MQ=255)
                                                                                              aGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGc                                                                                                                        >  1:30733/1‑236 (MQ=255)
                                                                                              aGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGc                                                                                                                        >  1:1120203/1‑236 (MQ=255)
                                                                                                   cTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                                                                                    <  2:1196671/203‑1 (MQ=255)
                                                                                                   cTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                                                                                    >  1:1196676/1‑203 (MQ=255)
                                                                                                    tGATGGAAAACCCTTGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  2:1243971/212‑1 (MQ=255)
                                                                                                     gATGGACAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGc                                                                                                                                                                                                             <  2:554625/144‑1 (MQ=255)
                                                                                                      aTGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGa                                                                                                                 >  1:601331/1‑235 (MQ=255)
                                                                                                                cTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCt                                                                                                      <  1:926719/236‑1 (MQ=255)
                                                                                                                   gCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGcccc                                                                                                      >  1:410110/1‑232 (MQ=255)
                                                                                                                      tCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGc                                                                                                                                                                                   >  1:401517/1‑153 (MQ=255)
                                                                                                                           gCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                                                                                    >  2:1272571/1‑179 (MQ=255)
                                                                                                                            cccGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTa                                                                                                           <  1:529953/219‑1 (MQ=255)
                                                                                                                            cccGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACaa                                                                                           >  1:1056931/1‑235 (MQ=255)
                                                                                                                             ccGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACg                                                                                         <  1:875180/236‑1 (MQ=255)
                                                                                                                              cgcgcgcgTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGc                                                                                        <  1:559611/236‑1 (MQ=255)
                                                                                                                                 gcgcgTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATc                                                                                                                                                         <  1:1033568/168‑1 (MQ=255)
                                                                                                                                   gcgTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCt                                                                                   >  1:1112010/1‑236 (MQ=255)
                                                                                                                                       gccccctcatcacgctgcGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGGGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCcgc                                                                                                                     <  1:584140‑M1/180‑1 (MQ=255)
                                                                                                                                         ccAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTc                                                                                                                              <  2:180171/187‑1 (MQ=255)
                                                                                                                                          cAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCTACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAg                                                                                                                <  1:998303/200‑1 (MQ=255)
                                                                                                                                              tGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGAGGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCcgc                                                                                                                     <  2:113787/191‑1 (MQ=255)
                                                                                                                                                gAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCGGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAgcgc                                                                                                             >  2:703546/1‑197 (MQ=255)
                                                                                                                                                gAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCa                                                                                                                                         >  2:540032/1‑169 (MQ=255)
                                                                                                                                                     cgTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATgg                                                                 <  1:601692/236‑1 (MQ=255)
                                                                                                                                                      gTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCcg                                                                                                                      <  1:48631/182‑1 (MQ=255)
                                                                                                                                                      gTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTa                                                                                                           <  2:601326/193‑1 (MQ=255)
                                                                                                                                                         GCGCAGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGCAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCaa                                                             <  1:703968‑M1/236‑1 (MQ=255)
                                                                                                                                                          CGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTgacc                                                                                                                                                              <  2:155699‑M1/138‑2 (MQ=255)
                                                                                                                                                           GCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAAcc                                                           <  2:72744‑M1/236‑1 (MQ=255)
                                                                                                                                                                     atgaggaaggtcttgaccagctcgcgcatctcttcggtggcccgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          >  2:706506‑M2/48‑147 (MQ=255)
                                                                                                                                                                     atgaggaaggtcttgaccagctcgcgcatctcttcggtggcccgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  1:706511‑M2/100‑1 (MQ=255)
                                                                                                                                                                         agaTGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAAt                                                <  2:808580/233‑1 (MQ=255)
                                                                                                                                                                           aTGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  2:743096/141‑1 (MQ=255)
                                                                                                                                                                           aTGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCtgctgc                                                     <  2:292869/226‑1 (MQ=255)
                                                                                                                                                                           aTGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATgcgg                                            <  1:1221434/235‑1 (MQ=255)
                                                                                                                                                                            tGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCAc                                                                                     >  2:583067/1‑193 (MQ=255)
                                                                                                                                                                            gtcgcgAGCGGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACAcc                                                                                                                                                            <  2:474740/120‑1 (MQ=255)
                                                                                                                                                                             ggtcttgaccagctcgcgcatctcttcggtggcccgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGaaa                                                                                                                                                <  1:614553‑M2/94‑1 (MQ=255)
                                                                                                                                                                              cgcgAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATgcgg                                            <  2:596956/232‑1 (MQ=255)
                                                                                                                                                                              cgagAGCTGGTCCAGCCCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATgg                                                                 <  1:180702/208‑1 (MQ=255)
                                                                                                                                                                                     tGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAg                                                                                                                <  2:800554/157‑1 (MQ=255)
                                                                                                                                                                                       gTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCa                                                  <  2:980091/217‑1 (MQ=255)
                                                                                                                                                                                       gTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCg                                <  1:125022/235‑1 (MQ=255)
                                                                                                                                                                                                    tCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAg                                                                                                                                                   >  2:494754/1‑107 (MQ=255)
                                                                                                                                                                                                    tCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAg                                                                                                                                                   <  1:494759/107‑1 (MQ=255)
                                                                                                                                                                                                    tCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGGGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCGCATCGGGGCGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGGATTTCGATggcggc                                                                                                                     >  2:202820/1‑137 (MQ=255)
                                                                                                                                                                                                           ggcccgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCGACAGTGGGTATATCCGCCTGa           >  2:563130‑M2/10‑236 (MQ=255)
                                                                                                                                                                                                               cgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGcc                                                                                                                                            >  2:384544‑M2/6‑103 (MQ=255)
                                                                                                                                                                                                               cgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          >  1:1046154‑M2/6‑105 (MQ=255)
                                                                                                                                                                                                               cgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                                                                                          <  2:1046149‑M2/100‑1 (MQ=255)
                                                                                                                                                                                                               cgcgcGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCGACAGTGGGTATATCCGCCTGAGCCt       >  1:885464‑M2/6‑236 (MQ=255)
                                                                                                                                                                                                                    gcAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATgg                                                                 >  2:879806/1‑173 (MQ=255)
                                                                                                                                                                                                                    gcAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCGACAGTGGGTATATCCGCCTGAGCCTGGAAg  >  1:73301/1‑236 (MQ=255)
                                                                                                                                                                                                                    |                                                                                                                                                                                                                                           
CGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATGGGCAACCTGCTGCGCAATGCGGCGCACTACACCGACAGTGGGTATATCCGCCTGAGCCTGGAAG  >  AE015451/1042800‑1043247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.