New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2084102 =	51 (0.710)	6 (0.090)	6/332	NT	11.1%	intergenic (+6/+23)	PP_1862/PP_1863	conserved membrane protein of unknown function/Transcriptional regulator, LysR family
	?	AE015451	2084123 =	48 (0.710)					intergenic (+27/+2)	PP_1862/PP_1863	conserved membrane protein of unknown function/Transcriptional regulator, LysR family

CGGCGCCGAGTACCTTGGTCACGCTGGTGACCTATGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAGGCTTGGGCTGGT  >  AE015451/2083891‑2084343                                                                                                                                                                                                                                         |                                                                                                                                                                                                                             cggcgCCGAGTACCTTGGTCACGCTGGTGACCTATGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATc                                                                                                                                                                                                                           >  1:533704/1‑236 (MQ=255)   ctggcggcgatctttgccatcgtcaccgccgggctggcagtgaccgcgcagctgcagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaatgtaatgctggtgcgcagtacgcagaccccctcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatctggggccgaaaatcggccccaGATCAc                                                                                                                                                                                                                         <  1:662745‑M2/6‑1 (MQ=255)                               ccTATGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCa                                                                                                                                                                                             >  1:269995/1‑236 (MQ=255)                                   tGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGa                                                                                                                                                                                                                     <  2:999236/208‑1 (MQ=255)                                   tGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCa                                                                                                                                                                                                             <  1:453608/216‑1 (MQ=255)                                    ggCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGGTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACg                                                                                                                                                                                                          >  1:201021/1‑218 (MQ=255)                                           accacAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGa                                                                                                                                                                                 >  1:630656/1‑236 (MQ=255)                                                aGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACt                                                                                                                                                                                                                        >  1:555965/1‑192 (MQ=255)                                                       aCTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGaaa                                                                                                                                                                                                                   >  2:1114875/1‑190 (MQ=255)                                                                           ttGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGa                                                                                                                                                                                 >  1:443915/1‑204 (MQ=255)                                                                                 gtgggtggCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGt                                                                                                                                                                    >  1:295620/1‑211 (MQ=255)                                                                                                aGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGa                                                                                                                                                                          <  2:533699/190‑1 (MQ=255)                                                                                                 gCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGa                                                                                                                                                                          >  1:824173/1‑189 (MQ=255)                                                                                                 gCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGa                                                                                                                                                                          <  2:824168/189‑1 (MQ=255)                                                                                                       gCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACt                                                                                                                                                           <  1:653184/198‑1 (MQ=255)                                                                                                        gctgccgccgttgcccatggccaatgtaatgctggtgcgcagtacgcagaccccctcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatctggggccgaaaatcggccccaGATCACTTGAAACCCTCAACGATGTAGTCGGCCATg                                                                                                                                                                                           <  2:471290‑M2/36‑1 (MQ=255)                                                                                                          ggggTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGCTTTTCGGCCCCAGATCACTTGAAACCCTCCACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGt                                                                                                                                                                    >  2:41706/1‑186 (MQ=255)                                                                                                          ggggTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGa                                                                                                                                                                          >  2:1233729/1‑180 (MQ=255)                                                                                                             gtgtGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCtt                                                                                                               >  1:194475/1‑236 (MQ=255)                                                                                                               gtgAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTgg                                                                                                                                                                             >  2:882496/1‑172 (MQ=255)                                                                                                               gtgAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCt                                                                                                                                                                  >  1:557344/1‑183 (MQ=255)                                                                                                               gtgAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCg                                                                                                             >  1:499905/1‑236 (MQ=255)                                                                                                                   aGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACa                                                                                                                                           >  1:898205/1‑202 (MQ=255)                                                                                                                   aGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGACGGGGTCTGCGTACTGCGCACCAGCATTAc                                                                                                                                            >  1:898799/1‑201 (MQ=255)                                                                                                                         tggccaatgtaatgcgggtgcgcagtacgcagaccccctcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatctggggccgaaaatcggccccaGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGa                                                                                                                                                                          <  2:271866‑M2/53‑1 (MQ=255)                                                                                                                                          aaGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATggg                                                                                                                                >  1:462805/1‑190 (MQ=255)                                                                                                                                             cgcagtacgcagaccccctcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatctggggccgaaaatcggccccaGATCACTTGACACCCTCAACGATGTAGTc                                                                                                                                                                                                  <  2:1175005‑M2/29‑1 (MQ=255)                                                                                                                                             cgcagtacgcagaccccctcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatctggggccgaaaatcggccccaGATCACTTGAAACCCTCAACGATGTAGTc                                                                                                                                                                                                  >  1:1175010‑M2/93‑121 (MQ=255)                                                                                                                                                    gggCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTa                                                                                                                                                             <  1:860564/151‑1 (MQ=255)                                                                                                                                                    gggCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTa                                                                                                                                                             >  2:860559/1‑151 (MQ=255)                                                                                                                                                          tGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCgg                                                                                           >  1:1026017/1‑211 (MQ=255)                                                                                                                                                           gTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAg                                                                 >  1:10240/1‑236 (MQ=255)                                                                                                                                                           gTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAg                                                                 >  1:414891/1‑236 (MQ=255)                                                                                                                                                            ttCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCtctc                                                                                                        <  2:1026012/196‑1 (MQ=255)                                                                                                                                                             gcTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGa                                                                                                 <  2:737905/201‑1 (MQ=255)                                                                                                                                                               tgtgtgTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTgc                                                             >  1:594138/1‑236 (MQ=255)                                                                                                                                                               tcgccaatcaccgactgcatggccgactacatcgttgagggtttcaagtgatcTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCCGCATTACATTGGCCa                                                                                                                                    <  2:271866‑M1/112‑1 (MQ=255)                                                                                                                                                                   tgtTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGcc                                                                                                                                                                                              <  1:1245338/103‑1 (MQ=255)                                                                                                                                                                   tgtTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGcc                                                                                                                                                                                              >  2:1245333/1‑103 (MQ=255)                                                                                                                                                                     tgccTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCGTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCg                                                                               <  2:414886/210‑1 (MQ=255)                                                                                                                                                                      tCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGGTATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCAc                                                                                                      <  1:22356/188‑1 (MQ=255)                                                                                                                                                                         tggtggTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTg                                                   >  1:905956/1‑236 (MQ=255)                                                                                                                                                                              gtCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCa                                                                                                                                                   >  2:182325/1‑135 (MQ=255)                                                                                                                                                                                catggccgactacatcgttgagggtttcaagtgatcTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACGGCGGCAGc                                                                                                                   <  2:471290‑M1/129‑1 (MQ=255)                                                                                                                                                                                      ggTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGccccc                                                                                >  2:757628/1‑194 (MQ=255)                                                                                                                                                                                       gactacatcgttgagggtttcaagtgatcTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTgcg                                                                                                                                                        >  1:1175010‑M1/30‑121 (MQ=255)                                                                                                                                                                                       gactacatcgttgagggtgtcaagtgatcTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTgcg                                                                                                                                                        <  2:1175005‑M1/92‑1 (MQ=255)                                                                                                                                                                                                gttgggggtttcaagtgatcTGGGGCCGATTTTCGGCCCCAGGTCACTTGAAAcc                                                                                                                                                                                                                 >  2:455974‑M1/21‑55 (MQ=255)                                                                                                                                                                                                gCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGc                             >  1:432671/1‑235 (MQ=255)                                                                                                                                                                                                gCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCa                            >  1:485605/1‑236 (MQ=255)                                                                                                                                                                                                gCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTCCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCCGGCTCTGCAg                                                                 >  1:146242/1‑199 (MQ=255)                                                                                                                                                                                                gCGTTTGAGCTTTGAGATTTTGGGGCCGA‑TTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCaa                           >  1:439294/1‑236 (MQ=255)                                                                                                                                                                                                  gTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCaaa                          >  1:81520/1‑236 (MQ=255)                                                                                                                                                                                                     tGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTTCAGCTGCGCGGTCACTGCCAGCCCGGCGGAGACGATGGCAAAGa                        >  1:145186/1‑235 (MQ=255)                                                                                                                                                                                                     tGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCcgg                                          >  1:1152683/1‑217 (MQ=255)                                                                                                                                                                                                      ggtttcaagtgacctggggccgaaaatcggccccaGATCACTTGAAACCCCCAAc                                                                                                                                                                                                           >  2:455974‑M2/36‑55 (MQ=255)                                                                                                                                                                                                         cTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATcgc                    <  1:434971/235‑1 (MQ=255)                                                                                                                                                                                                              gtgatcTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAg              <  1:662745‑M1/230‑1 (MQ=255)                                                                                                                                                                                                               gaTTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCg                                                                                                                                                                           >  2:319537/1‑78 (MQ=255)                                                                                                                                                                                                               gaTTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATcgccgc                 >  2:982907/1‑232 (MQ=255)                                                                                                                                                                                                                  tttGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAGGCtt          <  1:1114880/236‑1 (MQ=255)                                                                                                                                                                                                                    TGGGGCCGATTT‑CGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAGGCtt          >  2:439289‑M1/1‑233 (MQ=255)                                                                                                                                                                                                                          CGATTTTCGGCCCCAGATCTCTTGAATCCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAGGCTTGGGCTGgt  >  2:252323‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                                 cggccccaGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCaa                           <  2:630651‑M2/196‑1 (MQ=255)                                                                                                                                                                                                                                     cccaGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCt                                                               <  1:548048‑M2/160‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                             CGGCGCCGAGTACCTTGGTCACGCTGGTGACCTATGGCGTGCACCACAGCGTTGACTGGGGGGTTGGGATTCCCTTGGCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGCGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCCAGGCTTGGGCTGGT  >  AE015451/2083891‑2084343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.