New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2412887	54 (0.760)	10 (0.150)	7/330	NT	19.1%	intergenic (+151/‑270)	rlmM/PP_2114	Ribosomal RNA large subunit methyltransferase M/transposase
	?	AE015451	2414813 =	34 (0.510)					coding (11/198 nt)	PP_2115	conserved protein of unknown function

TTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCC  >  AE015451/2414580‑2415045                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         tttGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCt                                                                                                                                                                                                                                        <  2:889024/236‑1 (MQ=38)       tCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCAcc                                                                                                                                                                                                                                         <  2:1099492/229‑1 (MQ=37)           tgcaagcagctgtaccacgaccgcgaggaagtgacgtgccacctgcggcggctcgatttgaagccacgctgaggccagcatgtcgttctgcgtctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagggtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTGCCtt                                                                                                                                                                                                                                   >  2:718411‑M2/224‑231 (MQ=255)                  agctgtaccacgaccgcgaggaagtgacgtgccacctgcggcggctcgatttgaagccacgctgaggccagcacgtcgttctgcttctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTCCCTTCGCAAGCcctac                                                                                                                                                                                                                       <  1:198496‑M2/20‑3 (MQ=255)                    cATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGt                                                                                                                                                                                                                     <  1:1080653/236‑1 (MQ=37)                       tCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGtt                                                                                                                                                                                                                    <  2:664077/234‑1 (MQ=35)                            cgaccgcgaggaagtgacgtgccacctgcggcggctcgatttgaagccacgctgaggccagcacgtcgttctgcttctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTCCCTTCGCAAGCcctac                                                                                                                                                                                                                       <  1:850513‑M2/20‑3 (MQ=255)                               gCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTg                                                                                                                                                                                                          >  1:1143074/1‑236 (MQ=34)                                    aggaagtgacgtgccacctgcggcggctcgatttgaagccacgctgaggccagcacgtcgttctgcttctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgactttaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTCCCtt                                                                                                                                                                                                                                   <  1:715933‑M2/8‑1 (MQ=255)                                       gACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                                                                                                                                                                                       <  2:957733/215‑1 (MQ=33)                                            aCCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATGCATGCCCGTCACCTGc                                                                                                                                                                                                                                      >  1:117585/1‑195 (MQ=14)                                                 ttCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa                                                                                                                                                                                          <  1:757889/234‑1 (MQ=33)                                                                     cTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGGTCGGCCCCCTGAAGTCGCGaagatcaa                                                                                                                                                                                          >  2:587644/1‑214 (MQ=14)                                                                                  gcgACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaaga                                                                                                                                                                      <  2:1170549/221‑1 (MQ=31)                                                                                    gccagcacgtcgttctgcttctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                                                                                                     <  1:155864‑M2/86‑1 (MQ=255)                                                                                       aaaaaGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGCCCGCGCCGCAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc                                                                                                                                                                                                     <  1:382570/185‑1 (MQ=14)                                                                                        gcacgtcgttctgcttctgcgtctgcgtctgcttctgcttttgctgttgcttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                                                                                                           <  1:766806‑M2/80‑1 (MQ=255)                                                                                                       ccGCTGCGCTCCCACCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaaga                                                                                                                                                          <  2:612862/211‑1 (MQ=14)                                                                                                         tgcgtctgcgtctgcgtctgcttttgctgtgggttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTCCCTTc                                                                                                                                                                                                                                  <  2:35634‑M2/9‑1 (MQ=255)                                                                                                             cgcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGACGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagctcaa                                                                                                                                                      >  1:651498/1‑210 (MQ=14)                                                                                                                           ggCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGTGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCtt                                                                                                                                                                                                                                   <  2:1164302/119‑1 (MQ=11)                                                                                                                                   cgctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaag                                                                                                                                                                                         <  1:922166/153‑1 (MQ=31)                                                                                                                                    gcggcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTg                                                                                                                                                                                                                        <  2:238075/118‑1 (MQ=17)                                                                                                                                     ctgcgctCCGGGGTCCCCCCACCCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCGCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaaga                                                                                                                                                                <  2:1268844/176‑1 (MQ=9)                                                                                                                                         cttctaagcgcgcgatagttcaggcgacgcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                                                                                                                                                                                    <  2:943886‑M2/55‑1 (MQ=255)                                                                                                                                                 gttcccTCGCTCCGGGCTTGCTCCCGGGAGTA‑CGCGCTGCAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatccagatcaagatcaag                                                                                                                 >  2:1024905/4‑210 (MQ=14)                                                                                                                                                     ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGaa                                                                                      <  2:488542/234‑1 (MQ=255)                                                                                                                                                        tagttcaggcgaggcagattgcgacttcaggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAagag                                                                                                   <  1:598634‑M2/136‑1 (MQ=255)                                                                                                                                                               gCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTgg                                                                          >  1:1136208/1‑236 (MQ=255)                                                                                                                                                                     cTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGAcc                                                                       <  2:1094847/233‑1 (MQ=255)                                                                                                                                                                       cccGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                                                                                         >  1:970834/1‑165 (MQ=32)                                                                                                                                                                        gtttgcgacttcgggaggccgagcgtagggcttgcgaagggaggtgacgggcatggatgcccgtcaCCTCCCtt                                                                                                                                                                                                                                   <  2:307857‑M2/8‑1 (MQ=255)                                                                                                                                                                        ccGGCAGGCCCGCGCCGAAGGCCCCCTCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTc                                                                  <  1:295567/235‑1 (MQ=255)                                                                                                                                                                        ccGGCAGGACCGCGCCGAAGGCACCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaag                                                                                                                 <  1:337651/188‑1 (MQ=255)                                                                                                                                                                            cAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCt                                                             <  1:426524/236‑1 (MQ=255)                                                                                                                                                                             aGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCt                                                             <  1:519015/235‑1 (MQ=255)                                                                                                                                                                               gACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGaa                                                                                      <  1:317098/208‑1 (MQ=255)                                                                                                                                                                                  cgcgCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGCTCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTcg                                                                 >  1:639265/1‑226 (MQ=255)                                                                                                                                                                                             ccccATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGGCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagc                                                                                                                                        <  2:791744/144‑2 (MQ=17)                                                                                                                                                                                                    cTGGGGCCTCAGCGCTTGCCGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGtt                                                                                          <  2:1265233/183‑1 (MQ=255)                                                                                                                                                                                                    cTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCt                                                                                               >  2:740907/1‑178 (MQ=255)                                                                                                                                                                                                         gCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTAGGACCGCGTc                                                                  >  2:194143/1‑202 (MQ=255)                                                                                                                                                                                                         gCCTCAGCGCTTGACGGGCATCCATGACCGTCACCTGCCTTCGCAAGGCCTGCGCTCCGCCTCCTGAAGTCGCGa                                                                                                                                                                                                 >  2:351012/1‑75 (MQ=11)                                                                                                                                                                                                                 gcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGaa                                                                                      <  2:1277515/174‑1 (MQ=255)                                                                                                                                                                                                                 gcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGaa                                                                                      >  1:1277520/1‑174 (MQ=255)                                                                                                                                                                                                                      aCGGGCATCCATGCCCGGAACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGcccc                            <  2:191344/227‑1 (MQ=255)                                                                                                                                                                                                                          gCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATg                       <  2:1136203/228‑1 (MQ=255)                                                                                                                                                                                                                              ccATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGACCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCAcc           >  1:175116/1‑236 (MQ=255)                                                                                                                                                                                                                                atgcccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCAcccc         >  1:464752‑M2/11‑236 (MQ=255)                                                                                                                                                                                                                                   cccgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCG‑‑‑‑‑‑AAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGcc  <  1:542401‑M2/227‑1 (MQ=255)                                                                                                                                                                                                                                     cgtcaCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaag                                                                                                                                                           <  2:905497‑M2/80‑1 (MQ=255)                                                                                                                                                                                                                                       tcaCCTGCCTTCGCAAGGCATGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACcgcg                                                                    <  1:369006‑M2/167‑1 (MQ=255)                                                                                                                                                                                                                                        caCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCG‑‑‑‑‑‑AAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGc                               >  2:1244785‑M2/3‑200 (MQ=255)                                                                                                                                                                                                                                          ccTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAATATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCgcgc                                                              >  2:1017950/1‑173 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         TTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCC  >  AE015451/2414580‑2415045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.