Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2038136	2038427	292	24 [22]	[23] 27	[rffE]	[rffE]

GAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGGGGGGCACGC  >  AE015451/2037902‑2038260                                                                                                                                                                                                                                          |                                                                                                                              gAACTGCCACGCAGGTCTTTCTCACGGACCAGGGCGGCGGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGAt                                                                                                                             <  1:958555/236‑1 (MQ=255)                 cTTGCTCACGGACCAGGGCGGCAGGCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGGACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCt                                                                                                                     <  1:270049/228‑1 (MQ=255)                     ctcACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTg                                                                                                               <  2:686922/230‑1 (MQ=255)                                         tCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCgg                                                                                        >  2:897657/1‑233 (MQ=255)                                            tACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                                  <  1:509067/236‑1 (MQ=255)                                                      gagaAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTcc                                                                                                            <  1:1129141/200‑1 (MQ=255)                                                      gagaAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTcc                                                                                                            >  2:1129136/1‑200 (MQ=255)                                                                gggAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAg                                                                                >  2:854761/1‑218 (MQ=255)                                                                             cTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCa                                                  <  1:312047/235‑1 (MQ=255)                                                                                       ccGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAAtct                                        <  1:1227696/235‑1 (MQ=255)                                                                                            gTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTc                                                                         <  1:1141867/197‑1 (MQ=255)                                                                                             tCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACGCCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTgg                                                                                             <  2:189708/176‑1 (MQ=255)                                                                                                 cccGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGa                             <  1:975751/236‑1 (MQ=255)                                                                                                     cgTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGc                                                                 <  2:993233/196‑1 (MQ=255)                                                                                                                    aCAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                                  <  1:418057/164‑1 (MQ=255)                                                                                                                    aCAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGa                                                                      <  2:249150/176‑1 (MQ=255)                                                                                                                        gCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGGGGGGc      <  1:897662/236‑1 (MQ=255)                                                                                                                            gTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGGGGGGCAcgc  <  1:854766/236‑1 (MQ=255)                                                                                                                                          ctCAGGTTCTCACCCCCGGTCACCAACATTGCGCCCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGc                                                                 <  2:204597/158‑1 (MQ=255)                                                                                                                                                          cGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAg                                                                                                         <  2:93546/103‑1 (MQ=255)                                                                                                                                                               aCCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAgg                                                                                                                               <  2:1087693/76‑1 (MQ=255)                                                                                                                                                               aCCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAgg                                                                                                                               >  1:1087698/1‑76 (MQ=255)                                                                                                                                                                ccAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                                  >  2:581725/1‑120 (MQ=255)                                                                                                                                                                ccAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTc                                                                                  <  1:581730/120‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                              GAACTGCCACGCAGATCTTTCTCACGGACCAGGGCGGCAGTCGTACACGGGGTGAGAAACCGAGGGAGCTACAAAGCTCGGCCAGACCGAAGTCTGCCCGCGTACGACTGCCATGACAGGCAAGTCAGGTAGCTCGCATCAGGTTCTCACACCCGGTCACCAACATGGCGACCCTGTGACGTTATCCCTGAGGCATTTCCCCGACAATTCAGCTGCTTCTGACTGGCGCGTAGGATAGTTCGCTTGGTTGTCCGAGTTGAAGAGGTGGGGCGGGGTTTCAGGAAAGTCTGACGTGCGGAATGTGCATTCCAAGGCAAATCTCTTCGTCGTGATTGTTGACTGTTGTTGGGGGGGCACGC  >  AE015451/2037902‑2038260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑