New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3387405	32 (0.780)	3 (0.080)	3/320	NT	8.9%	coding (186/795 nt)	PP_2989	Oxidoreductase, short chain dehydrogenase/reductase family
	?	AE015451	= 3387439	31 (0.800)					coding (220/795 nt)	PP_2989	Oxidoreductase, short chain dehydrogenase/reductase family

GCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3387292‑3387405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgacTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCGCGATGTGTCGCGCGCCACAAGGATGAGATCGTGGCCACGACGGGCGAAACGCTCGGCGTAGGTGGCGCCAATGCCGCTGGAGGCGCCAGTAATGAGTACGGTCGGACGTGTGGTCATGGAAGTTACC  <  AE015451/3387439‑3387210                                                                                                                                                                                                                                                                                                                                                          GCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGGCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCGCGA                                                                                                                              >  1:321128/1‑220                         CTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCG                                                                                                                                 <  2:321127/193‑1                                                                          GCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCGC                                                                                                                                >  2:631252/1‑145                                                                                                             GCCGACTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCGCGATGTGTCGCGCGCCACAAGGATGAGATCGTGGCCACGACGGGCGAAACGCTCGGCGTAGGTGGCGCCAATGCCGCTGGAGGCGCCAGTAATGAGTACGGTCGGACGTGTGGTCATGGAAGTTACC  <  1:174239/236‑1                                                                                                                                                                                                                                                                                                                                                          GCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3387292‑3387405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgacTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCTGGCAGCACCTCAACGGCCACATGGCTTTCCTCGCGCAGACGTAATGCAAGCGCCTCCATGCGCGATGTGTCGCGCGCCACAAGGATGAGATCGTGGCCACGACGGGCGAAACGCTCGGCGTAGGTGGCGCCAATGCCGCTGGAGGCGCCAGTAATGAGTACGGTCGGACGTGTGGTCATGGAAGTTACC  <  AE015451/3387439‑3387210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.