New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 3387405 | 32 (0.780) | 3 (0.080) | 3/320 | NT | 8.9% | coding (186/795 nt) | PP_2989 | Oxidoreductase, short chain dehydrogenase/reductase family |
? | AE015451 | = 3387439 | 31 (0.800) | coding (220/795 nt) | PP_2989 | Oxidoreductase, short chain dehydrogenase/reductase family |
GGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCAATCGCGCCGCGCCTCGCGCAGTCGGGCACTGGTGCGATCGTCAACGTGGG > AE015451/3387210‑3387635 | ggTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggc < 1:174239‑M2/236‑7 (MQ=255) ttCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTgcgc < 1:402223/235‑1 (MQ=255) acGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAata < 1:643515/236‑1 (MQ=255) cGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAatat > 1:676882/1‑236 (MQ=255) gTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATc > 1:625900/1‑236 (MQ=255) ccGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgtg > 1:393052/1‑236 (MQ=255) gTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCTCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCGCggta > 1:208135/1‑181 (MQ=255) tGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGc < 2:625899/220‑1 (MQ=255) tGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCaacaac > 1:359953/1‑235 (MQ=255) cgcCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCgg > 1:407261/1‑236 (MQ=255) aGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTCCGTCTGCGCGAGGCAAGCCCTGTGGCCGTTGATGTGCTGCCAGCCCACCTGACACGCt > 2:63293/1‑157 (MQ=255) aGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGc > 1:73215/1‑210 (MQ=255) aGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGc > 1:719130/1‑236 (MQ=255) tGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCgg < 1:26674/236‑1 (MQ=255) aCGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGc < 2:527383/191‑1 (MQ=255) gTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTcc > 1:724679/1‑236 (MQ=255) gCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACtttcaagcacggacaggtctgccgagcttgtcagggcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcga > 1:321128‑M1/1‑114 (MQ=255) tctcATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGCGTTGATCAACACCGCGGGGATGGCCCa > 1:187406/1‑189 (MQ=255) ctcATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCtt < 2:724678/234‑1 (MQ=255) catcatTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTc < 1:610188/235‑1 (MQ=255) ccTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGAc < 2:400937/96‑1 (MQ=255) cTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACtttcaagcacggacaggtctgccgagcttgtcaggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcg < 2:321127‑M1/193‑104 (MQ=255) cTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGAc > 1:218781/1‑95 (MQ=255) cTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGAc < 2:218780/95‑1 (MQ=255) ggCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGCTGAGGTGCTGCCAGCCGACCTGACACGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCACTATc > 2:48562/1‑145 (MQ=255) gACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGACTGCGAGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGc > 1:409196/1‑223 (MQ=255) gACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCAGGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCACTATCGGCGTGTTGATCAACAACGCGGGt > 2:356102/1‑162 (MQ=255) tCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGCCCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacgacgggc > 1:321128‑M2/1‑106 (MQ=255) gcgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgc > 2:631252‑M2/1‑104 (MQ=255) cgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaag < 2:321127‑M2/193‑91 (MQ=255) cgtGGAGGCGCTTGGATTACGTCTGCGAGAGGAAAGCCAGGTGGCCGTTGCGGTGCTGCCAGCCGACCTGACCAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTgcgc < 2:226847/110‑1 (MQ=255) gcTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTg < 2:134741/166‑1 (MQ=255) gcTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTg > 1:134741/1‑166 (MQ=255) ttACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTCTTGATCAACAACGCGGGTATGGcc > 2:544408/1‑141 (MQ=255) gcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACtttcaagcacggacaggtctgccgagcttgtcaggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgc > 2:631252‑M1/1‑41 (MQ=255) gcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGctgctg < 1:615426/219‑1 (MQ=255) gcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCAATCGCGCCGCGCCt > 1:346392/1‑235 (MQ=255) gcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCAATCGCGCCGCGCCt > 1:669209/1‑235 (MQ=255) aaaGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCACACGggtggt > 2:17208/1‑137 (MQ=255) ttGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTAcc > 1:195720/1‑176 (MQ=255) gcgcAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAAAACTACCGCGCTGACGCGGCTCGCTGCTGCAATCGCGCCGCGCCTCGCGCAGTCGGGCACCGGTGCGATc > 1:208350/4‑230 (MQ=255) cAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCGGCAATcgcgc > 2:370159/1‑195 (MQ=255) gCCGACtttcaagcacggacaggtctgccgagcttgtcaggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacgacgggcgaaacgctcggcgtaggtggcgccaatgccgctggaggcgccagtaatgagtacggtcggacgtgtggtcatggaagttacc < 1:174239‑M1/236‑231 (MQ=255) cGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGt > 2:504906/1‑144 (MQ=255) | GGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCAATCGCGCCGCGCCTCGCGCAGTCGGGCACTGGTGCGATCGTCAACGTGGG > AE015451/3387210‑3387635 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |