New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4053468 =	33 (0.810)	3 (0.080)	3/320	NT	8.5%	coding (42/1320 nt)	PP_3573	putative Monooxygenase
	?	AE015451	4053485 =	33 (0.850)					coding (59/1320 nt)	PP_3573	putative Monooxygenase

AGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4053626‑4053468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcgTGGCCATGAGCGAACACCTGAGCAAGCTTGGC  >  AE015451/4053485‑4053516                                                                                                                                                                                                 AGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCGGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCACGCTCGCTCAGGTGGTCGCCCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAG                        <  1:756003/169‑1                                                                              GATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGTTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGC  <  2:516228/114‑1                                                                              GATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCGTGGCCATGAGCGAACACCTGAGCAAGCTTGGC  >  1:516229/1‑114                                                                                                                                                                                                 AGCCCCGGGAAGCGGTCGTGCCAGGCCGGGCCGTTGGCGACCAGCGAGTCCCAGCGGCCGGTACGCCAGGCCTGCGCGATGCGGTTGCGCTCCAGTACCAGGTGCGGCACGCCAAGCTTGCTCAGGTGTTCGCTCATGGCCACGCCGGCCTGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4053626‑4053468 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcgTGGCCATGAGCGAACACCTGAGCAAGCTTGGC  >  AE015451/4053485‑4053516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.