New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4829472	20 (0.490)	5 (0.130)	5/316	NT	17.0%	coding (1718/12954 nt)	pvdL	non‑ribosomal peptide synthase (subunit of ferribactin synthase)
	?	AE015451	= 4829518	30 (0.780)					coding (1672/12954 nt)	pvdL	non‑ribosomal peptide synthase (subunit of ferribactin synthase)

ATCTGTGCCACAGCCTTGCTGTAGTCGGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4829229‑4829472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctgcgcATGGACGATGGCAGCCTGGACTGCTATGCCCGTTTCCCTGAGGTGAGCGCAGCCGGTATCCGTGCAACCGCTGGCGACGAGCTGCAAGCACGCATCGCCGCTGTGTGG  <  AE015451/4829518‑4829411                                                                                                                                                                                                                                                                                                                                                                  ATCTGTGCCACAGCCTTGCTGTAGTCGGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATAC                                                                                                                       <  1:591075/235‑1    TGTGCCACAGCCTTGCTGTAGTCGGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACC                                                                                                                      >  2:710432/1‑233                          CGGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGC                                                                                                                <  2:658931/217‑1                           GGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCCCGGCGCCAGCGGGTGCACGGATACCGG                                                                                                                    >  1:168614/1‑212                                                                AGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCT                                                                                                                  >  2:704425/1‑177                                                                         aCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGC                                                                                                                >  2:702691/2‑170                                                                         CCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGC                                                                                                                <  1:702692/170‑1                                                                                      CCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCATGGACGATGGCAGCCTGGA                                                                                          >  1:131526/1‑179                                                                                                       gGGGTGGCGGCGATGTAGTTACCGCCCGGCAGCAGGAGGTGGTCGGCCGCGGCCCCCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCG                                                                                                                     <  1:149071/134‑1                                                                                                                       AGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGC                                                                                                                <  1:178031/124‑1                                                                                                                             CGCCCAGCAGCAGGAAGTGGTCGCCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGC                                                                                                                <  1:157573/118‑1                                                                                                                                                    cCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCATGGACG                                                                                                       <  2:131526/103‑1                                                                                                                                                                                                     TGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCATGGACGATGGCAGCCTGGACTGCTATGCCCGTTTCCCTGAGGTGAGCGCAGCCGGTATCCGTGCAACCGCTGGCGACGAGCTGCAAGCACGCATCGCCGCCGTGGGG  >  2:309658/1‑156                                                                                                                                                                                                          GCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCATGGACGATGGCAGCCTGGACTGCT                                                                                     <  1:217992/68‑1                                                                                                                                                                                                          GCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCATGGACGATGGCAGCCTGGACTGCT                                                                                     >  2:217991/1‑68                                                                                                                                                                                                                                                                                                                                                                  ATCTGTGCCACAGCCTTGCTGTAGTCGGCCAGTACCGGCGCCTCGAACAGGGTACGCAGGCTCAGGTCGATACCCAACTCATCGGCCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4829229‑4829472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctgcgcATGGACGATGGCAGCCTGGACTGCTATGCCCGTTTCCCTGAGGTGAGCGCAGCCGGTATCCGTGCAACCGCTGGCGACGAGCTGCAAGCACGCATCGCCGCTGTGTGG  <  AE015451/4829518‑4829411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.