New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4829472	20 (0.490)	5 (0.130)	5/316	NT	17.0%	coding (1718/12954 nt)	pvdL	non‑ribosomal peptide synthase (subunit of ferribactin synthase)
	?	AE015451	= 4829518	30 (0.780)					coding (1672/12954 nt)	pvdL	non‑ribosomal peptide synthase (subunit of ferribactin synthase)

CCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGCGAACACCGCCA  >  AE015451/4829314‑4829745                                                                                                                                                                                                             |                                                                                                                                                                                                                                    ccAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTg                                                                                                                                                                                                      >  1:322497/1‑236 (MQ=255)     gcgcgcTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGc                                                                                                                                                                                                  <  1:710433/236‑1 (MQ=255)        cgcTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGc                                                                                                                                                                                                  <  2:453943/233‑1 (MQ=255)        cgcTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTg                                                                                                                                                                                                <  2:330872/235‑1 (MQ=255)                                                               tcCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAgcgcg                                                                                                                                                                              <  2:750817/198‑1 (MQ=255)                                                               tcCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTcagc                                                                                                                                                                  <  2:551262/210‑1 (MQ=255)                                                                                         gATGTCGCGCCACACAGCGGCGATGCGTGCGTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCa                                                                                                              <  1:217867/236‑1 (MQ=255)                                                                                          aTGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAg                                                                                                             >  1:752951/1‑236 (MQ=255)                                                                                               gcgcCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCgg                                                                                                                                       >  2:253273/1‑205 (MQ=255)                                                                                                  ccccACGGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATgcgcagccggtatccgtgcaaccgctggcgacgagctgcaagcacgca                                                                                                                                                                                     >  2:309658‑M2/1‑108 (MQ=255)                                                                                                          cggcgATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGa                                                                                                                                                           <  2:539400/174‑1 (MQ=255)                                                                                                                  cGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCCCCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCCGCCGGCAGGCAGAGCGCTGCAACTTGCCGCCGGAGGTCTTTGGCAGCGCCCCg                                                                                                                                                                           >  2:47103/1‑150 (MQ=255)                                                                                                                     gCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAg                                                                                  >  1:295688/1‑236 (MQ=255)                                                                                                                                         ggTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGgc                                                                                                                 <  2:300043/185‑1 (MQ=255)                                                                                                                                                       cGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACcgcc                                                >  2:380173/1‑235 (MQ=255)                                                                                                                                                                tCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGGTGCGGCTGATCTCCACGGCGACACCg                                          >  2:335223/1‑233 (MQ=255)                                                                                                                                                                     tCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCcct                                   >  2:343450/1‑235 (MQ=255)                                                                                                                                                                       aGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGGAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCtt                                                                                                                                                                                        <  2:115108/84‑1 (MQ=255)                                                                                                                                                                          gAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTg                                                                                                      <  1:154019/163‑1 (MQ=255)                                                                                                                                                                          gAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTg                                                                                                      >  2:154018/1‑163 (MQ=255)                                                                                                                                                                          gAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGGCACCGATGCCCTCCTCGc                             >  1:147654/1‑236 (MQ=255)                                                                                                                                                                              cGGGCATAGCAGTCCAGGCTGCCATCGTCCGTGCGCAGCCGGCAGGCAGAGCGCTGCAACGTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGcgacg                                                                                                                        <  2:216390/141‑1 (MQ=255)                                                                                                                                                                                 gCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTccc                                                     >  1:434807/1‑204 (MQ=255)                                                                                                                                                                                     aGCAGTCCAGGCTGCCATCGTCCATgcgcagccggtatccgtgcaaccgctggcgacgagctgcaagc                                                                                                                                                                                          >  2:217991‑M2/1‑25 (MQ=255)                                                                                                                                                                                     aGCAGTCCAGGCTGCCATCGTCCATgcgcagccggtatccgtgcaaccgctggcgacgagctgcaagc                                                                                                                                                                                          <  1:217992‑M2/68‑44 (MQ=255)                                                                                                                                                                                      gCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGAGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGa                 >  1:381769/1‑236 (MQ=255)                                                                                                                                                                                          tCCAGGCTGCCATCGTCCATgcgcagccggtatccgtgcaaccgctggcgacgagctgcaagcacgcatcgccgctgtgtggcgcgacatcctcaaggtagaggcggtggccgcggacgaccacttcctgctgctgggcggtaactccatcgccgccacccaggccacagcgcgcctgg                                                                      >  1:131526‑M2/1‑20 (MQ=255)                                                                                                                                                                                          tCCAGGCTGCCAGCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGc             <  1:336841/236‑1 (MQ=255)                                                                                                                                                                                            cAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCGTgg                                                                                                     >  2:396064/1‑145 (MQ=255)                                                                                                                                                                                             aGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGCCGGCGa           >  1:54824/1‑235 (MQ=255)                                                                                                                                                                                             aGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGCGaa          <  1:515730/236‑1 (MQ=255)                                                                                                                                                                                                  gCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGCCCTGgcgcc                                                                                                              >  2:222073/1‑130 (MQ=255)                                                                                                                                                                                                    cATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGCGAACACCGc    <  1:676771/235‑1 (MQ=255)                                                                                                                                                                                                      tCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGCGAACACCGCca  <  1:647241/235‑1 (MQ=255)                                                                                                                                                                                                       cGTCCATgcgcagccggtatccgtgcaaccgctggcgacgagctgcaagcacgcatcgccgctgtgtggcgcgacatcctcaaggtagaggcggtggccgcggg                                                                                                                                    <  2:131526‑M2/104‑98 (MQ=255)                                                                                                                                                                                                             |                                                                                                                                                                                                                                    CCAGGCGCGCTGTGGCCTGGGTGGCGGCGATGGAGTTACCGCCCAGCAGCAGGAAGTGGTCGTCCGCGGCCACCGCCTCTACCTTGAGGATGTCGCGCCACACAGCGGCGATGCGTGCTTGCAGCTCGTCGCCAGCGGTTGCACGGATACCGGCTGCGCTCACCTCAGGGAAACGGGCATAGCAGTCCAGGCTGCCATCGTCCATGCGCAGCCGGCAGGCAGAGCGCTGCAACTTGCCGCTGGAGGTCTTTGGCAGCGCGCCGGGGTTCAGCAGCAGGACCACGGCCGGGGCCTGTCGGCAGGCGTCGGCGACGACCTGGCGCAGGGTCTTGATCAGGTCCTGGGGCTTGAGTGCCTTTTGCACGTTGCGGCTGATCTCCACCGCGACACCGATGCCCTCCTCGCCCTGGTGCTCGACGGCGAACACCGCCA  >  AE015451/4829314‑4829745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.