New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 949238 =32 (0.780)4 (0.100) 4/318 NT 12.8% coding (80/507 nt) dsbB disulfide bond formation protein B
?AE015451 949363 = 24 (0.620)coding (205/507 nt) dsbB disulfide bond formation protein B

CGACGTCGTTGCGGCCGGTCTCAGCCACACTGGATAGCCCTGCGCAGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGTTGCGGTATCGA  >  AE015451/949007‑949472
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                          
ccattgcgccagcgacaggccgaggatcggcggatacggcgtgctgcagaagccgtcgacctgaaacgccagtggccacagctttgccagtggcaggtcatccacgatcggctgcagggtatcgataccgcaactgaccatggggttggcgagtatatacacatggttgcccgccgcaacgattccgccaatggcactgagcaccaccaacgcctcgaagaaggtcaggctgcggc                                                                                                                                                                                                                                        >  1:498528‑M1/232‑236 (MQ=255)
                                   aGCCCTGCGCAGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCctc                                                                                                                                                                                                                                  >  1:686853/1‑207 (MQ=255)
                                    gCCCTGCGCAGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCAccc                                                                                                                                                                                                    <  1:588696/236‑1 (MQ=255)
                                      ccTGCGCAGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCt                                                                                                                                                                                                   <  1:593299/235‑1 (MQ=255)
                                             aGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGccg                                                                                                                                                                                                                         >  2:669649/1‑204 (MQ=255)
                                             aGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCg                                                                                                                                                                                              >  2:656627/1‑233 (MQ=255)
                                                  ttCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGgcggcg                                                                                                                                                                                                                                       >  2:693170/1‑187 (MQ=255)
                                                  ttCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGgcggcg                                                                                                                                                                                                                                       <  1:693171/187‑1 (MQ=255)
                                                            cgcccACGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTGGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCa                                                                                                                                                                                                       <  2:171118/207‑1 (MQ=255)
                                                            cTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCACTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGc                                                                                                                                                                              >  1:478815/1‑234 (MQ=255)
                                                                   ggCATGCTCAAAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGtt                                                                                                                                                                           <  1:376134/230‑1 (MQ=255)
                                                                                 ccATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCg                                                                                                                                                                      <  1:34961/221‑1 (MQ=255)
                                                                                  cATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGc                                                                                                                                                        >  2:255712/1‑234 (MQ=255)
                                                                                      cccAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGtt                                                                                                                                                  >  1:544654/1‑236 (MQ=255)
                                                                                        cAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGcc                                                                                                                                                                                                >  1:157873/1‑188 (MQ=255)
                                                                                                           caggcaggCGGCCCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATcc                                                                                                                                                                                    <  1:18351/181‑1 (MQ=255)
                                                                                                                                   tATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCCTCCTGCAGCGTTATGCGTTg                                                                                                                                                                   >  2:8165/1‑174 (MQ=255)
                                                                                                                                      ccATCGAATGAGCCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttctt                                                                                                  <  1:233505/236‑1 (MQ=255)
                                                                                                                                       cATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttctt                                                                                                  <  1:276780/235‑1 (MQ=255)
                                                                                                                                        aTCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACcttctt                                                                                                  <  1:255713/234‑1 (MQ=255)
                                                                                                                                          cGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCTGCGCCCTCTACATGCAGTTGGTGCTCGGCGAGGCACCCTGCCCGCTGGGCATCCTGCAGCGTTATGCGTTGCTGTTctt                                                                                                                                                           >  1:74692/1‑173 (MQ=255)
                                                                                                                                            aaGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTg                                                                                                                                                         >  2:83024/1‑175 (MQ=255)
                                                                                                                                            aaGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCtt                                                                                                                                            >  1:534539/1‑188 (MQ=255)
                                                                                                                                            aaGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCtt                                                                                                                                            <  2:534538/188‑1 (MQ=255)
                                                                                                                                            aaGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGgcc                                                                                                                    >  2:440025/1‑211 (MQ=255)
                                                                                                                                                                      ttgcccgccgcaacgattccgccaatggcactgagcaccaccaacgcctcgaagaaggtcaggctGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCgtg                                                                                                                                                    <  1:3473‑M1/89‑1 (MQ=255)
                                                                                                                                                                      ttgcccgccgcaacgattccgccaatggcactgagcaccaccaacgcctcgaagaaggtcaggctGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCgtg                                                                                                                                                    >  2:3473‑M1/66‑154 (MQ=255)
                                                                                                                                                                                         cGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCa                                                <  1:686510/235‑1 (MQ=255)
                                                                                                                                                                                               tttCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCAtg                                          >  1:472846/1‑235 (MQ=255)
                                                                                                                                                                                                   tGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGta                                      <  1:732947/235‑1 (MQ=255)
                                                                                                                                                                                                     gTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGc                                                 <  2:544653/222‑1 (MQ=255)
                                                                                                                                                                                                           ctgGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTgcggcg                                                    >  2:539179/1‑213 (MQ=255)
                                                                                                                                                                                                              gggCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGcc                            >  1:670236/1‑234 (MQ=255)
                                                                                                                                                                                                              gggCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCCGCGGGCAACCATGTGTATATACTCGc                             >  2:272494/1‑233 (MQ=255)
                                                                                                                                                                                                                gCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGTGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAAcc                        >  1:419985/1‑236 (MQ=255)
                                                                                                                                                                                                                    cctcgaagaaggtcaggctGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGa                                                                                                                              <  2:673300‑M1/111‑1 (MQ=255)
                                                                                                                                                                                                                     ctcgaagaaggtcaggctGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTgcggc                                                     >  1:266981‑M1/19‑202 (MQ=255)
                                                                                                                                                                                                                                  aggctGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCg                                                                                                <  2:266980‑M1/141‑1 (MQ=255)
                                                                                                                                                                                                                                      ggcggcGCGCTCTACAGGCAGGTGGTGCTCGGCGAGGCTCCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAAcccc                      <  1:245374/216‑1 (MQ=255)
                                                                                                                                                                                                                                      ggcggcGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGTTGCGGTATCGa  >  1:266810/1‑236 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                          
CGACGTCGTTGCGGCCGGTCTCAGCCACACTGGATAGCCCTGCGCAGTGCTTCCGCGACGCTCCCTCGGCATGCTCACAGGCCATGCCCAGCGTGTAGACTTGCGCCCAGGCAGGCGGACCACGCTGCCACTATCCATCGAAGGAACCGGCAATGAACGAACAAACATCGCGCCTGAATCGGGAACGGCGCTTTCTGGTGCTGCTGGGGCTGATCTGCCTTTCACTGATCGGCGGCGCCCTCTACATGCAGGTGGTGCTCGGCGAGGCACCCTGCCCGCTGTGCATCCTGCAGCGTTATGCGTTGCTGTTCATTGCCGTGTTTGCCTTCATCGCTGCGGCGATGCCCGGGCGCCGCAGCCTGACCTTCTTCGAGGCGTTGGTGGTGCTCAGTGCCATTGGCGGAATCGTTGCGGCGGGCAACCATGTGTATATACTCGCCAACCCCATGGTCAGTTGCGGTATCGA  >  AE015451/949007‑949472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.