New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1682699 =	32 (0.780)	4 (0.100)	4/318	NT	11.2%	coding (1218/1710 nt)	recJ	ssDNA‑specific exonuclease RecJ
	?	AE015451	1682746 =	33 (0.850)					coding (1265/1710 nt)	recJ	ssDNA‑specific exonuclease RecJ

GCCCTGGCCCAACTCAAGGACCTGCCGGTCGAGTCGATGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGCCCATGGGGCC  >  AE015451/1682481‑1682934                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            gCCCTGGCCCAACTCAAGGACCTGCCGGTCGAGTCGATGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCcg                                                                                                                                                                                                                                      >  1:592247/1‑226 (MQ=255)   ccTGGCCCAACTCAAGGACCTGCCGGTCGAGTCGATGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCAcc                                                                                                                                                                                                                             >  2:651944/1‑233 (MQ=255)      ggaacagcggctcagggaagtgctggccccatgggccggcatggcgcagggccttggccaggtcgaggtggaactcctctaccgccaggctgccgtcggacaacaggcggccagtcaggtcttcttcgcgcagctgacgccgcacctcttcgtcgaacgcctcggcaaacgccgagaaattagcctctggcaacgacaacccggcagccatggCGTGGCCGCGCGCCAcc                                                                                                                                                                                                                             <  2:619439‑M1/17‑1 (MQ=255)                      cTGCCGGTCGAGTCGATGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTcgg                                                                                                                                                                                                       <  1:390786/236‑1 (MQ=255)                               gagtcgaTGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGc                                                                                                                                                                                              <  1:663329/236‑1 (MQ=255)                                         cGTATGGGTTGTGCCTGTTCGATGCCGACTGGCCCCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGcc                                                                                                                                                                                    <  1:206591/236‑1 (MQ=255)                                                tttGTGCCTGTTCGATGCCGAGTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGGTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTcggc                                                                                                                                                                                                      <  2:58820/210‑1 (MQ=255)                                                      ccTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTgg                                                                                                                                                                                                                                         >  2:666978/1‑170 (MQ=255)                                                      ccTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGc                                                                                                                                                                       >  1:485307/1‑236 (MQ=255)                                                             gATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATgg                                                                                                                                                                                         >  2:370821/1‑211 (MQ=255)                                                             gATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAgg                                                                                                                                                                 >  1:495956/1‑235 (MQ=255)                                                                                ttctctaccgccaggctgccgtcggacaacaggcggccagtcaggtcttcttcgcgcagctgacgccgcacctcttcgtcgaacacctcggcaaacgccgagaaattagcctctggcaacgacaacccggcagccatggCGTGGccgcgg                                                                                                                                                                                                                                   <  2:468643‑M1/11‑2 (MQ=255)                                                                                gCGTGGTCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCCCCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTcgg                                                                                                                                                                                                       <  2:8758/178‑1 (MQ=255)                                                                                                                gAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCAGGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAAttt                                                                                                                                                          <  1:17100/191‑1 (MQ=255)                                                                                                                gAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGAGGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCt                                                                                                             <  1:72170/236‑1 (MQ=255)                                                                                                                      tACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTgcgc                                                                                                         >  1:706574/1‑234 (MQ=255)                                                                                                                            cggccggcCATCGCCTTCGCCGATGCTGGTGAGGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGcc                                                                                                                                                                                    <  2:156403/153‑1 (MQ=255)                                                                                                                                cGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAg                                                                                                                                          >  1:30063/1‑191 (MQ=255)                                                                                                                                cGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTg                                                                                             >  1:755286/1‑236 (MQ=255)                                                                                                                                     aTCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAAGTtct                                                                                                                                                        >  2:528375/1‑172 (MQ=255)                                                                                                                                       cGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGc                                                                                                                                                                                              <  2:70623/132‑1 (MQ=255)                                                                                                                                             cGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGtt                                                                                                                                                                         <  2:196236/147‑1 (MQ=255)                                                                                                                                                cGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCtgttgt                                                                             >  1:253916/1‑236 (MQ=255)                                                                                                                                                cGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCtgttg                                                                              >  1:271693/1‑235 (MQ=255)                                                                                                                                                  aTGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTg                                                                                                                                                                        <  1:442355/143‑1 (MQ=255)                                                                                                                                                               cgaacgcctcggcaaacgccgagaaattagcctctggcaacgacaacccgccagccatggCGTGGCCGCGCGCCACCCGCAGCTGCACCGCAAGATCGGCGGCCa                                                                                                                                                                                                 <  2:214038‑M1/45‑1 (MQ=255)                                                                                                                                                                    gcctcggcaaacgccgagaaattagcctctggcaacggcaacccggcagccatggCGTGGCCGCGCGCCACCCGCAGCtgg                                                                                                                                                                                                                    <  2:628916‑M1/26‑2 (MQ=255)                                                                                                                                                                           caaacgccgagaaattagcctctggcaacgacaacccggcagccatggCGTGGCCGCGCGCAACCCGCAGCTGCTCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTgccagcgg                                                                                                                                                                 <  2:416132‑M1/77‑4 (MQ=255)                                                                                                                                                                                   gTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTTGTTGCCGGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCt                                                                                                             <  2:611660/169‑1 (MQ=255)                                                                                                                                                                                       ggTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGAc                                       >  1:257183/1‑235 (MQ=255)                                                                                                                                                                                            cGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTagag                                                      >  1:581122/1‑215 (MQ=255)                                                                                                                                                                                                    cATATGCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCt                         <  1:185106/236‑1 (MQ=255)                                                                                                                                                                                                         tCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCt                                                                                                             <  2:348969/147‑1 (MQ=255)                                                                                                                                                                                                           gcgATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACt                                                                                          <  2:391964/164‑1 (MQ=255)                                                                                                                                                                                                                 cgcTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGc            >  1:547718/1‑236 (MQ=255)                                                                                                                                                                                                                 cgcTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGGGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCGGGCGGTAGAGGAGTTc                                                >  1:176113/1‑200 (MQ=255)                                                                                                                                                                                                                  gcTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAg                                                                   <  2:337461/180‑1 (MQ=255)                                                                                                                                                                                                                   cTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGcc           <  1:651945/235‑1 (MQ=255)                                                                                                                                                                                                                       aTGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGCCCATgg      <  1:710112/236‑1 (MQ=255)                                                                                                                                                                                                                        tGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGGCCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCAt                  <  2:706573/223‑1 (MQ=255)                                                                                                                                                                                                                          ccGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGCCCAGGGGGc   >  1:115309/1‑236 (MQ=255)                                                                                                                                                                                                                           CGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTT‑TCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGCCCATGGGGcc  >  1:370822‑M1/1‑235 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            GCCCTGGCCCAACTCAAGGACCTGCCGGTCGAGTCGATGCCGTATGGGTTGTGCCTGTTCGATGCCGACTGGCACCAGGGCGTGATCGGTATTCTGGCTTCGCGCTTGAAGGAGCGTTACCACCGGCCGACCATCGCCTTCGCCGATGCTGGTGATGGCATGCTCAAAGGCTCGGCGCGTTCGGTGCCGGGCTTCCATATTCGCGATGCGCTGGATGCCGTGGCCGCGCGCCACCCGCAGCTGATCAGCAAGTTCGGCGGCCACGCCATGGCTGCCGGGTTGTCGTTGCCAGAGGCTAATTTCTCGGCGTTTGCCGAGGCGTTCGACGAAGAGGTGCGGCGTCAGCTGCGCGAAGAAGACCTGACTGGCCGCCTGTTGTCCGACGGCAGCCTGGCGGTAGAGGAGTTCCACCTCGACCTGGCCAAGGCCCTGCGCCATGCCGGCCCATGGGGCC  >  AE015451/1682481‑1682934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.