| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4320150 = | 50 (1.220) | 3 (0.080) | 3/324 | NT | 5.3% | coding (615/627 nt) | PP_3791 | Site‑specific recombinase, phage integrase family |
| ? | AE015451 | 4320231 = | 58 (1.470) | coding (534/627 nt) | PP_3791 | Site‑specific recombinase, phage integrase family | |||||
TCATCAGAGCGTGAAGCGGACAGCTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGTGGA > AE015451/4319916‑4320374 | tcatcaGAGCGTGAAGCGGACAGCTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGtct < 1:685247/236‑1 (MQ=255) gactggccctacaggcctggatacatcaagcccaactccacagcgaggattgtcttttcccaagccggctacacgcctcagtgcatctctccacccggcagtacgcccgaatggtcaaagcgtggataaagtctattgggctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCt > 1:456594‑M1/234‑235 (MQ=255) gAAGCGGACAGCTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCAtct > 1:617132/1‑236 (MQ=255) gAAGCGGACAGCTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCAtct > 1:514858/1‑236 (MQ=255) cTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGtctgctct < 2:521101/218‑1 (MQ=255) aagcccaactccacagcgaggattgtcttttcccaagccggctacacgcctcagtgcatctctccacccggcagtacgcccgaatggtcaaagcgtggataaagtctattgggctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCTGCTCTGCCATCTCCAATGCGTCAt < 2:417674‑M1/26‑1 (MQ=255) gTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAATTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATg < 1:441339/236‑1 (MQ=255) gTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATg < 1:155494/236‑1 (MQ=255) gTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATg < 1:701862/236‑1 (MQ=255) tGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGtctgctcttc > 2:764122/1‑205 (MQ=255) tGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGtctg > 1:335072/1‑201 (MQ=255) ccGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAATTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGt > 2:441338/1‑218 (MQ=255) cGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATc < 1:637276/234‑1 (MQ=255) cTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACtt < 1:239816/216‑1 (MQ=255) gttcccacgccggctacacgcctcagtgcatctctccacccggcagtacgcccgaatggtcaaagcgtggataaagtctattgcgctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCt > 2:210850‑M1/179‑180 (MQ=255) aTCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCtt > 2:517990/1‑236 (MQ=255) cAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCCATGCGTCATCgc > 1:100256/1‑201 (MQ=255) aGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGGCAGACCTCCGTCTGCTCTGCCATCTCCCATGCGTCATCGCCTTCACTGCCCAgg > 2:239815/1‑214 (MQ=255) ctacacgcctcagtgcatctctccacccggcagtacgcccgaatggtcaaagcgtggataaagtctattgggctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCt > 2:561845‑M1/166‑167 (MQ=255) cACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCg < 1:92755/236‑1 (MQ=255) gccggCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCt < 2:216477/216‑1 (MQ=255) aGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTCTCGCACCGTGCTTTCACGCTTTGTATGGCCGAGCAGGAGCTGCACTGct > 1:658815/1‑235 (MQ=255) aGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCAGCTCCAATGCGTCATCGACTTCAAGGCCCAGGt > 2:89636/1‑181 (MQ=255) aGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGtt < 1:519741/236‑1 (MQ=255) cGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGc > 2:342238/1‑169 (MQ=255) acgcccgaatggtcaaagcgtggataaagtctattgggctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCt > 1:417675‑M1/132‑235 (MQ=255) tAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCttt < 1:402826/235‑1 (MQ=255) tCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTc < 2:512807/144‑1 (MQ=255) cGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGaa > 2:602590/1‑208 (MQ=255) tgCCCGCTATCGGACGATGGGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATg < 2:378027/152‑1 (MQ=255) agcgtggataaagtctattgggctagatcctgctatgtacggcacccacacgatgagacgtacaaaggcatcgctgatctatcgcaggacaaagaacttgagagcagttcagctcCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCa > 1:8542‑M1/116‑165 (MQ=255) cGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAg < 1:753255/236‑1 (MQ=255) cTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAg < 2:321702/191‑1 (MQ=255) aTCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAAc > 2:695752/1‑198 (MQ=255) aTCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGAt > 1:637108/1‑235 (MQ=255) ggCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATg < 1:522719/133‑1 (MQ=255) aCAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCt < 1:105664/200‑1 (MQ=255) ccTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGtct < 2:514857/217‑1 (MQ=255) gATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACAt > 2:395125/1‑234 (MQ=255) tCAATGCCCGTTTTAGGTCGAATCGCGACGTTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTg < 1:5186/204‑1 (MQ=255) aaTGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCg < 2:566337/214‑1 (MQ=255) ccGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCg < 2:540514/209‑1 (MQ=255) ccGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCg > 1:540515/1‑209 (MQ=255) aTCGAGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCTCTCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCCCCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAg < 1:234376/172‑1 (MQ=255) aCGTTCATACTTCGGCTGCCGCTGGACGCTGTCAGGCCTCCGTATGATCTGCCCTCTCCAATGCTTCATCGACTTCAATGCCCAGGTATCGCACCGTGc < 2:280877/99‑1 (MQ=255) tACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCtt > 2:318376/1‑233 (MQ=255) ccTCGAGCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGcc < 1:612569/190‑1 (MQ=255) cGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCCATAGACTTTATCCACGCTTTGACCATTCggg > 1:170983/1‑236 (MQ=255) cGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCTTTGACCATTCgg < 1:517991/235‑1 (MQ=255) aCGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAgg < 2:388771/186‑1 (MQ=255) tGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCg < 1:751881/160‑1 (MQ=255) tGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGt < 1:90082/236‑1 (MQ=255) tCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTATCATCGTGTGGGTGTGGTACATAGCAGGATGTa > 2:136151/1‑185 (MQ=255) cAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTTTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTTCGATAGATCAGCGATGCCTTTGTACGt > 1:378423/1‑150 (MQ=255) cAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGGGga > 1:182293/1‑236 (MQ=255) gACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGc < 1:764123/133‑1 (MQ=255) gACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTAt < 2:500323/198‑1 (MQ=255) cTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGcc < 2:348263/182‑1 (MQ=255) tCCGTCTGCTCTGCCATCTCCAATGCTTCCTCGACTTCAATGCCCAGGTATCGCa < 2:204150/55‑1 (MQ=255) tCCGTCTGCTCCGCGATCTCCAATGCGTCATCGGCTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCATGAGTTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGa < 2:549118/131‑1 (MQ=255) tctgctctgcCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTAt > 2:428595/1‑72 (MQ=255) tctgctctgcCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTAt < 1:428596/72‑1 (MQ=255) | TCATCAGAGCGTGAAGCGGACAGCTATCCGAGAAGGTGGCCGTTTCACGCCTCATGATCTGCAAGCGCAGCCCCCACCGGGCTGGCATAGTCCAGGAAGCAGGCGTAACTCTGTTCGTAGCCGGCTATCGGACGATGAGGCCGGAACAGGCTAAAGTGCCTTGATCAATGCCCGTTTTAGGTCGAATCGCGACGGTCATACCTCGACCGTCGCTGGACGCTGTCAGACCTCCGTCTGCTCTGCCATCTCCAATGCGTCATCGACTTCAATGCCCAGGTATCGCACCGTGCTTTCAAGCTTTGTATGGCCGAGCAGGAGCTGAACTGCTCTCAAGTTCTTTGTCCTGCGATAGATCAGCGATGCCTTTGTACGTCTCATCGTGTGGGTGCCGTACATAGCAGGATCTAGCCCAATAGACTTTATCCACGCTTTGACCATTCGGGCGTACTGCCGGGTGGA > AE015451/4319916‑4320374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |