New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2033404 =	13 (0.320)	6 (0.150)	6/328	NT	32.1%	coding (885/1665 nt)	pgi‑I	glucose‑6‑phosphate isomerase
	?	AE015451	2033445 =	NA (NA)					coding (926/1665 nt)	pgi‑I	glucose‑6‑phosphate isomerase

ACTGGGTGGGTGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCG  >  AE015451/2033325‑2033642                                                                                                                         |                                                                                                                                                                                                        gttgcgtcccagaagttgccataccacgcgcccagcagggccagtagcaccggcatgttcttgtcgaacggtgcggtctGGAACTGCTGTCCGGCGCCTACCCCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTg                                                                                                                                                                          >  2:145807‑M1/80‑152 (MQ=255)        gggtgggCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTgcgcctgtct                                                                              >  1:460004/1‑229 (MQ=17)              gcgcTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACg                                                                                                  <  2:460003/209‑1 (MQ=31)                  tACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCAc                                                                     >  1:522445/1‑234 (MQ=31)                                    aTCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGGGTATGGCAACTTCTGGGACGCAAACAGCCAcgc                                                                                                                >  2:607044/1‑175 (MQ=9)                                      cGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACacg                                                                                                                                                                                      >  2:17944/1‑101 (MQ=17)                                                        ggCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAaga                                   >  1:438641/1‑230 (MQ=31)                                                           tcttgtcgaacggagcggtctGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGGCAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTg                                                                                       <  1:243370‑M1/154‑1 (MQ=255)                                                                      ccAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCgtgt                                                                                                                                                    <  1:621482/105‑1 (MQ=32)                                                                      ccAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCgtgt                                                                                                                                                    >  2:621481/1‑105 (MQ=33)                                                                         aCTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTg                                                                                                                                                                          >  1:755238/1‑80 (MQ=34)                                                                         aCTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTg                                                                                                                                                                          <  2:755237/80‑1 (MQ=34)                                                                                     tgctgTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGTGGGGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGtg                              <  1:607045/208‑1 (MQ=14)                                                                                        tgTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTg                                                         >  2:607196/1‑176 (MQ=32)                                                                                        tgTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGGCAGCCGGTACCCCGGTGAAGACCg  >  1:9177/1‑231 (MQ=14)                                                                                                                         |                                                                                                                                                                                                        ACTGGGTGGGTGGGCGCTACTCGCTGTGGTCGGCCATCGGCCTGCCGATCGCCCTGGCCATCGGCACTGCCAACTTCAAGGAACTGCTGTCCGGTGCCTACACCATGGACCAGCACTTCCAGACCGCACCGTTCGACAAGAACATGCCGGTGCTACTGGCCCTGCTGGGCGTGT‑‑GGTATGGCAACTTCTGGGACGCAAACAGCCACGCGATCCTGCCGTACGACCACTACCTGCGCAACATCACCAAGCACCTGCAGCAGCTGGACATGGAATCCAACGGCAAGAGCGTGCTGCAAGACGGTACCCCGGTGAAGACCG  >  AE015451/2033325‑2033642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.