| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1483968 = | NA (NA) | 46 (0.740) | 43/276 | NT | 100% | intergenic (+40/+2) | aldA/gapC | aldehyde dehydrogenase A, NAD‑linked/pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment) |
| ? | CP009273 | 1858031 = | 0 (0.000) | intergenic (+8/‑76) | gapA/yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein | |||||
GGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1484105‑1483968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTA > CP009273/1858031‑1858170 GGTGTTTGATGCCACGCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGAT < 2:940033/150‑1GGTGTTTGATGCCACGCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGAT > 2:727059/1‑150GGTGTTTGATGCCACGCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGA < 2:824643/149‑1 GTGTTTGATGCCACGCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATC > 2:734407/1‑150 GTTTGATGCCACGCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCT > 1:673009/1‑149 GCAAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACT < 2:627536/150‑1 AAACGGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTC < 1:374679/150‑1 GGAAATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTC < 1:366854/150‑1 AATTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCT < 2:101512/150‑1 TTACCGCTGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑T < 2:495368/150‑1 TGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTAC < 1:142096/150‑1 TGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTT < 2:140536/148‑1 TTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAA < 2:42228/150‑1 TACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAA < 2:978509/149‑1 TACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAA < 1:422819/149‑1 CAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGGGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATG < 2:367210/150‑1 CAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAAT > 2:299201/1‑149 CTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAG > 1:107687/1‑150 TGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTA > 1:103114/1‑149 AACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGA > 2:31128/1‑150 CGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACT < 2:751155/150‑1 CGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACT < 1:524254/150‑1 CGCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTTACCTGTTAAAATGAAGTTAAAGGACTGCG > 1:384232/1‑150 GCCTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGT > 2:291385/1‑149 CTGGTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCAT < 2:673009/150‑1 GTACGATAACGAATATGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGAT < 1:245491/150‑1 TGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGC < 1:685957/150‑1 TGGCTTCGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGC > 2:1065548/1‑150 CGTCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTC < 1:793636/149‑1 TCACGCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGG < 1:213230/150‑1 acgCAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTC < 2:915759/147‑1 GCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGA < 1:434637/150‑1 ATTCGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACA > 1:882721/1‑149 CGCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTG > 1:831807/1‑127 GCACCCTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGC < 2:831807/127‑1 CTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCT < 2:103114/150‑1 CTCGAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCT > 1:919180/1‑150 GAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTG < 2:32736/148‑1 GAAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTG > 2:703370/1‑148 AAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCC > 1:394210/1‑150 AAAAATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGT < 1:703370/148‑1 AATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCT > 1:933376/1‑150 ATTCGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTC > 1:1005860/1‑150 CGCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCG > 1:1053238/1‑150 GCTAAACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGT > 1:804420/1‑150 ACTCTGACGTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTA > 2:374925/1‑149 GGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1484105‑1483968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTA > CP009273/1858031‑1858170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |