| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1483968 = | NA (NA) | 46 (0.740) | 43/276 | NT | 100% | intergenic (+40/+2) | aldA/gapC | aldehyde dehydrogenase A, NAD‑linked/pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment) |
| ? | CP009273 | 1858031 = | 0 (0.000) | intergenic (+8/‑76) | gapA/yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein | |||||
GCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTA > CP009273/1857893‑1858170 | ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGa < 2:824643‑M2/11‑1 (MQ=255)ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGAt < 2:940033‑M2/12‑1 (MQ=255)ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGAt > 2:727059‑M2/139‑150 (MQ=255) gtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATc > 2:734407‑M2/138‑150 (MQ=255) gtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCt > 1:673009‑M2/136‑149 (MQ=255) gcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACt < 2:627536‑M2/27‑1 (MQ=255) aaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTc < 1:374679‑M2/29‑1 (MQ=255) ggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTc < 1:366854‑M2/33‑1 (MQ=255) aattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGct < 2:101512‑M2/36‑1 (MQ=255) ttaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGctc‑t < 2:495368‑M2/38‑1 (MQ=255) tgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑tttttttt < 2:140536‑M2/45‑1 (MQ=255) tgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTAc < 1:142096‑M2/47‑1 (MQ=255) tttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATaa < 2:42228‑M2/54‑1 (MQ=255) tacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATaaa < 2:978509‑M2/55‑1 (MQ=255) tacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATaaa < 1:422819‑M2/55‑1 (MQ=255) caactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGGGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATg < 2:367210‑M2/58‑1 (MQ=255) caactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAAt > 2:299201‑M2/93‑149 (MQ=255) ctggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAg > 1:107687‑M2/90‑150 (MQ=255) tgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTa > 1:103114‑M2/86‑149 (MQ=255) aacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGa > 2:31128‑M2/82‑150 (MQ=255) cggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACt < 2:751155‑M2/71‑1 (MQ=255) cggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACt < 1:524254‑M2/71‑1 (MQ=255) cgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTTACCTGTTAAAATGAAGTTAAAGGACTGCg > 1:384232‑M2/76‑150 (MQ=255) gcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGt > 2:291385‑M2/75‑149 (MQ=255) ctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCAt < 2:673009‑M2/78‑1 (MQ=255) gtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGAt < 1:245491‑M2/81‑1 (MQ=255) tggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGc < 1:685957‑M2/96‑1 (MQ=255) tggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGc > 2:1065548‑M2/55‑150 (MQ=255) cgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTc < 1:793636‑M2/101‑1 (MQ=255) tcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCgg < 1:213230‑M2/104‑1 (MQ=255) acgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTc < 2:915759‑M2/106‑1 (MQ=255) gcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGa < 1:434637‑M2/111‑1 (MQ=255) attcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACa > 1:882721‑M2/36‑149 (MQ=255) cgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTg > 1:831807‑M2/33‑127 (MQ=255) gcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGc < 2:831807‑M2/96‑1 (MQ=255) ctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCt < 2:103114‑M2/124‑1 (MQ=255) ctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCt > 1:919180‑M2/27‑150 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTg < 2:32736‑M2/125‑1 (MQ=255) gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTg > 2:703370‑M2/24‑148 (MQ=255) aaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGt < 1:703370‑M2/126‑1 (MQ=255) aaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTcc > 1:394210‑M2/23‑150 (MQ=255) aattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCctct > 1:933376‑M2/20‑150 (MQ=255) attcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCtctc > 1:1005860‑M2/19‑150 (MQ=255) cgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcg > 1:1053238‑M2/16‑150 (MQ=255) gctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCcgt > 1:804420‑M2/15‑150 (MQ=255) actctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTa > 2:374925‑M2/10‑149 (MQ=255) | GCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTC‑TTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTA > CP009273/1857893‑1858170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |