| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 982,570 | IS5 (–) +4 bp | 24.4% | intergenic (‑132/+468) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 683307 = | NA (NA) | 11 (0.170) | 11/276 | NT | 18.2% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 982573 | 48 (0.770) | intergenic (‑135/+468) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase | |||||
| * | ? | CP009273 | = 684501 | NA (NA) | 20 (0.310) | 20/276 | NT | 28.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 982570 = | 48 (0.770) | intergenic (‑132/+471) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase | |||||
TTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATT > CP009273/982425‑982721 | ttGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAc < 1:75840/150‑1 (MQ=255) cgcTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGtt < 2:623547/150‑1 (MQ=255) gcTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaag < 2:734759‑M2/150‑6 (MQ=255) catcatTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGc > 1:182111/1‑149 (MQ=255) atcatTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgc > 1:63541‑M2/1‑140 (MQ=255) atcatTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTa < 1:350256/150‑1 (MQ=255) atcatTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTa < 2:336887/150‑1 (MQ=255) ttattaCCCTCATGTTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGaa < 2:458241/149‑1 (MQ=255) tattaCCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGaaa < 1:247877/149‑1 (MQ=255) ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAg > 2:231036‑M2/128‑150 (MQ=255) cccTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTa > 1:86806/1‑150 (MQ=255) ccTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTAc < 1:565329/150‑1 (MQ=255) aTGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACa > 2:363558/1‑147 (MQ=255) cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACaaa < 2:670668‑M2/32‑1 (MQ=255) ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACaaag < 1:693232‑M2/33‑1 (MQ=255) ttttttttATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACaaagataa < 1:961565/150‑1 (MQ=255) cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACaaagataa < 2:565486‑M2/37‑1 (MQ=255) ttttATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACaaagataaaga < 1:976845/149‑1 (MQ=255) tATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTg > 1:932596/1‑150 (MQ=255) tGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGt > 1:931362/1‑150 (MQ=255) acacCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGttt < 1:970898/150‑1 (MQ=255) acacCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGttt > 2:266608/1‑150 (MQ=255) acacCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGtt < 1:717062/149‑1 (MQ=255) acacCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGtt < 1:999368/149‑1 (MQ=255) aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGtt > 1:966077‑M2/104‑150 (MQ=255) ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgtcctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccctccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGatt > 1:122142‑M2/102‑149 (MQ=255) ccTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCa > 2:514916/1‑149 (MQ=255) cTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCaa > 1:406054/1‑149 (MQ=255) cACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGa < 2:1044918/150‑1 (MQ=255) tGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGaaa > 1:820393/1‑149 (MQ=255) ccGTCCATAAGTTCTTGCAATAAAAATTTTCGGAACTTATGGAGGA‑AGGTTGGTTGTTTTATTTGGCCGCAGGCATCTTTCCAATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGaaaa < 1:676841/149‑1 (MQ=255) cGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGaaaaaa > 2:292736/1‑149 (MQ=255) cGTCAATAAGCTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGaaaaaa > 2:824516/1‑149 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGaaaaaa > 1:983999‑M2/90‑150 (MQ=255) tCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAatat < 1:274433/150‑1 (MQ=255) aaTAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 1:510157‑M2/150‑63 (MQ=255) aTAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGt > 1:968086/1‑149 (MQ=255) aTAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGt > 1:1002956/1‑149 (MQ=255) aaGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAAc > 1:1058556/1‑150 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTaa > 1:26473‑M2/83‑150 (MQ=255) gTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag > 1:157231‑M2/1‑83 (MQ=255) ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAAcc < 2:26473‑M2/70‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCa > 1:774324‑M2/79‑149 (MQ=255) tCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGt > 2:83111/1‑149 (MQ=255) tCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTa < 1:718919/150‑1 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAg > 1:791571‑M2/76‑150 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAAt > 2:158795‑M2/70‑150 (MQ=255) aaaTTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAAttt > 2:689249/1‑149 (MQ=255) aaTTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAAttt > 2:131771/1‑148 (MQ=255) ttACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 1:1053107‑M2/149‑84 (MQ=255) ttACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAgg > 1:440172/1‑149 (MQ=255) cGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa < 1:109168‑M2/150‑88 (MQ=255) cGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAAc < 1:363558/149‑1 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACttt < 2:834202‑M2/93‑1 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTtg < 1:375953‑M2/94‑1 (MQ=255) ttGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGaa < 2:932596/149‑1 (MQ=255) tgatgaGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAaca > 1:708060/1‑150 (MQ=255) gatgaGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAacac > 1:485170/1‑150 (MQ=255) atgaGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 1:168414‑M2/1‑52 (MQ=255) tttGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCatat < 1:83111/150‑1 (MQ=255) gtgtCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTc > 2:178758/1‑149 (MQ=255) tgtCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga < 1:219877‑M2/150‑111 (MQ=255) tgtCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCa > 1:749255/1‑150 (MQ=255) tCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCAt < 2:5274/149‑1 (MQ=255) tgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCa > 1:874135‑M2/34‑147 (MQ=255) tgatctcatatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATag < 2:791571‑M2/117‑1 (MQ=255) tATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAgaga > 1:893426/1‑150 (MQ=255) tgtgTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATag > 1:772910/1‑145 (MQ=255) gtgtCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATaga < 2:772910/145‑1 (MQ=255) catatcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGt > 1:715934‑M2/28‑150 (MQ=255) tcagggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGtgat < 2:983999‑M2/126‑1 (MQ=255) ggacttgttcgcaccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGatat < 1:527735‑M2/131‑1 (MQ=255) ggCATCTTTCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt < 1:632293‑M2/149‑128 (MQ=255) aTCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTa > 1:379310/1‑149 (MQ=255) cTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAg > 1:83143/1‑150 (MQ=255) tCC‑ATTCAAACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta < 1:447453‑M2/150‑137 (MQ=255) tCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCa < 2:1058556/149‑1 (MQ=255) cc‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAAt > 1:205266/1‑150 (MQ=255) caccttccCTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAAtt < 1:293426‑M2/142‑1 (MQ=255) aTTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAAttt < 2:325513/150‑1 (MQ=255) aaaCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag < 1:250610‑M2/150‑144 (MQ=255) aaaCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag > 2:510157‑M2/1‑7 (MQ=255) cTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTa < 2:887447/150‑1 (MQ=255) cTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTa < 1:121821/150‑1 (MQ=255) tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt > 1:153293‑M2/1‑3 (MQ=255) tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt < 1:146558‑M2/130‑128 (MQ=255) aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta > 2:146558‑M2/1‑2 (MQ=255) aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt > 1:348456‑M2/1‑1 (MQ=255) | TTGCGCTTCATCATTATTTATTACCCTCATGGTTTTTTTTATGACACCTGCCACTGCCGTCAATAAGTTCTGTCAATAAAAATTTACGGAAC‑TATTGATGAGAGTTTGGTGTCTTTATGTGTCTGCAGGCATCTTTCC‑ATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAAGAAAAAATATGTAACCAAAAGTAAAATTTAAGGAACTTTGTGAACACCGTCATATTTCCATAGAGACGTGATGATATTTACAGCAATTTTAATCTATT > CP009273/982425‑982721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |