Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	1857028	1858030	1003	63 [0]	[0] 63	[gapA]	[gapA]

AGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATATGACTATCAAAGTAGGTATCAACGGTTTTGGCCGTATCGGTCGCATTGTTTTCCGTGCTGCTCAGAAACGTTCTGACATCGAGATCGTTGCAATCAACGACCTGTTAGACGCTGATTACATGGCATACATGCTGAAATATGACTCC  >  CP009273/1856881‑1857174                                                                                                                                                   |                                                                                                                                                    aGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATgga                                                                                                                                                  >  1:958999‑M2/1‑147 (MQ=255)       agTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacct                                                                                                                                            >  1:16072‑M2/1‑141 (MQ=255)         tGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctca                                                                                                                                          >  2:187357‑M2/1‑139 (MQ=255)            ggCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaa                                                                                                                                        <  1:425198‑M2/149‑14 (MQ=255)                 gtcagtcGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacacc                                                                                                                                  >  2:129174‑M2/1‑131 (MQ=255)                 gtcagtcGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacacc                                                                                                                                  >  2:389939‑M2/1‑131 (MQ=255)                  tcagtcGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacacca                                                                                                                                 >  2:424676‑M2/1‑130 (MQ=255)                      tcGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcat                                                                                                                             >  1:857894‑M2/1‑126 (MQ=255)                      tcGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcat                                                                                                                             >  2:143985‑M2/1‑126 (MQ=255)                        gcgTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcata                                                                                                                            <  1:887197‑M2/149‑26 (MQ=255)                            aaTGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacact                                                                                                                        <  2:632484‑M2/149‑30 (MQ=255)                                  tAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcag                                                                                                                 <  1:879961‑M2/150‑37 (MQ=255)                                   aGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatca                                                                                                                  >  1:509355‑M2/1‑113 (MQ=255)                                       acaGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagt                                                                                                            <  1:283193‑M2/150‑42 (MQ=255)                                        caGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagtt                                                                                                           <  1:379607‑M2/150‑43 (MQ=255)                                        caGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagtt                                                                                                           >  2:126470‑M2/1‑108 (MQ=255)                                           gattgattTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggc                                                                                                        >  2:436649‑M2/1‑105 (MQ=255)                                                 tttGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatc                                                                                                  >  2:391168‑M2/1‑99 (MQ=255)                                                 tttGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatc                                                                                                  >  1:899223‑M2/1‑99 (MQ=255)                                                    gTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcac                                                                                                <  1:3220‑M2/149‑54 (MQ=255)                                                     tCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacc                                                                                               >  2:3220‑M2/1‑95 (MQ=255)                                                         aaTGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgtt                                                                                          <  2:923411‑M2/150‑60 (MQ=255)                                                          aTGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttt                                                                                         >  1:11400‑M2/1‑90 (MQ=255)                                                           tGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgtttt                                                                                        <  2:186502‑M2/150‑62 (MQ=255)                                                             aTTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttca                                                                                      >  1:488647‑M2/1‑87 (MQ=255)                                                              ttGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcag                                                                                     >  2:13279‑M2/1‑86 (MQ=255)                                                                 acacGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtac                                                                                  <  2:735231‑M2/150‑68 (MQ=255)                                                                 acacGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtac                                                                                  >  1:894471‑M2/1‑83 (MQ=255)                                                                           gCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgttt                                                                         <  2:1043846‑M2/149‑77 (MQ=255)                                                                            cTTGATGCTTCGGAAGGTTTTTGTACTTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcaccccaaaaacaccatcatacactaaatcagcaagatggcagcatcaccccgttttcagtacgttacgtttca                                                                       <  2:921775‑M2/150‑79 (MQ=255)                                                                                        tAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatgg                                                           >  2:959510‑M2/1‑60 (MQ=255)                                                                                          aGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatg                                                            <  1:266705‑M2/147‑90 (MQ=255)                                                                                           ggTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatg                                                            <  1:810657‑M2/146‑90 (MQ=255)                                                                                           ggTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatg                                                            <  2:142518‑M2/146‑90 (MQ=255)                                                                                            gTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagat                                                       <  1:267643‑M2/150‑95 (MQ=255)                                                                                                 tGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcc                                                   >  1:638145‑M2/1‑51 (MQ=255)                                                                                                  gTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgccc                                                  >  2:1023087‑M2/1‑50 (MQ=255)                                                                                                      ttttACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatccc                                             >  1:735231‑M2/1‑46 (MQ=255)                                                                                                           cAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaaccccatcatacactaaatcagtaagttggcagcatccccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccat                                        >  1:985080‑M2/1‑41 (MQ=255)                                                                                                           cAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccat                                        <  1:759829‑M2/150‑110 (MQ=255)                                                                                                           cAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccat                                        <  1:186674‑M2/150‑110 (MQ=255)                                                                                                                  ccTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggggattgcccatcccgccatcctggtc                                 >  2:887197‑M2/1‑34 (MQ=255)                                                                                                                   cTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtct                                >  1:829530‑M2/1‑33 (MQ=255)                                                                                                                   cTTTTATTCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtc                                 <  1:665052‑M2/149‑117 (MQ=255)                                                                                                                         ttCCCTAACAAATAGCTGGTGGAATATggagcacctcaaaaacactatcatacactaaatcagtaagttggcagcatcaccccgttttcagcacgttacgtttcactgtgagaatggagattgctcatcccgccatcctggtctaagcct                          <  2:458980‑M2/150‑124 (MQ=255)                                                                                                                         ttCACTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcct                          <  1:496333‑M2/150‑124 (MQ=255)                                                                                                                            aCTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctgga                       >  2:1040664‑M2/1‑24 (MQ=255)                                                                                                                            aCTAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacaataaatcaggaagatggcagcatcatcccgttttcagtacgttacgtttcactgtgagaatggagatagcccatcccgccatcctggtctaagcctgg                        <  2:405382‑M2/149‑126 (MQ=255)                                                                                                                              tAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctgga                       <  2:717846‑M2/148‑127 (MQ=255)                                                                                                                              tAACAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcc                           <  2:4152‑M2/144‑123 (MQ=255)                                                                                                                               aaCAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcct                          >  1:4152‑M2/1‑21 (MQ=255)                                                                                                                                aCAAATAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaag                    <  1:657386‑M2/149‑130 (MQ=255)                                                                                                                                   aaTAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggat                 <  2:875608‑M2/149‑133 (MQ=255)                                                                                                                                    aTAGCTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatc                <  1:649675‑M2/149‑134 (MQ=255)                                                                                                                                        cTGGTGGAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattt           >  1:141671‑M2/1‑12 (MQ=255)                                                                                                                                          ggtggAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaatttt          <  2:37633‑M2/149‑140 (MQ=255)                                                                                                                                           gtggAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttca        >  1:1043846‑M2/1‑9 (MQ=255)                                                                                                                                           gtggAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttc         >  2:496333‑M2/1‑9 (MQ=255)                                                                                                                                           gtggAATATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttc         >  2:186674‑M2/1‑9 (MQ=255)                                                                                                                                               aaTATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttcatccg    >  1:186502‑M2/1‑5 (MQ=255)                                                                                                                                               aaTATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttcatccg    >  1:470738‑M2/1‑5 (MQ=255)                                                                                                                                               aaTATggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttcatcc     <  2:838676‑M2/149‑145 (MQ=255)                                                                                                                                                 tatggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccgttttcagtacgttacgtttcactgtgagaatggagattgcccatcccgccatcctggtctaagcctggaaaggatcaattttcatccgaa  <  1:641188‑M2/150‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    AGGAAGAGTGAGGCGAGTCAGTCGCGTAATGCTTAGGCACAGGATTGATTTGTCGCAATGATTGACACGATTCCGCTTGACGCTGCGTAAGGTTTTTGTAATTTTACAGGCAACCTTTTATTCACTAACAAATAGCTGGTGGAATATATGACTATCAAAGTAGGTATCAACGGTTTTGGCCGTATCGGTCGCATTGTTTTCCGTGCTGCTCAGAAACGTTCTGACATCGAGATCGTTGCAATCAACGACCTGTTAGACGCTGATTACATGGCATACATGCTGAAATATGACTCC  >  CP009273/1856881‑1857174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑