Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	1857028	1858030	1003	63 [0]	[0] 63	[gapA]	[gapA]

GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG  >  CP009273/1857883‑1858179                                                                                                                                                     |                                                                                                                                                     atttcggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgt                                                                                                                                                      >  2:701701‑M2/149‑149 (MQ=255)  tttcggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGa                                                                                                                                                    >  1:268229‑M2/148‑150 (MQ=255)     cggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGaca                                                                                                                                                  <  2:619476‑M2/5‑1 (MQ=255)      ggttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGacac                                                                                                                                                 <  2:1024301‑M2/6‑1 (MQ=255)       gttcggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACtg                                                                                                                                               >  1:430161‑M2/143‑150 (MQ=255)           ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGa                                                                                                                                            <  2:491977‑M2/11‑1 (MQ=255)           ggtgtttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGAt                                                                                                                                           >  1:1010055‑M2/139‑150 (MQ=255)                ttgatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaa                                                                                                                                       >  1:795371‑M2/134‑149 (MQ=255)                  gatgccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTaaaa                                                                                                                                     <  1:1027562‑M2/18‑1 (MQ=255)                     gccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAagag                                                                                                                                 <  2:337928‑M2/22‑1 (MQ=255)                     gccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAagag                                                                                                                                 >  1:486201‑M2/129‑150 (MQ=255)                      ccacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGc                                                                                                                                <  2:268229‑M2/23‑1 (MQ=255)                       cacgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCg                                                                                                                               <  1:773963‑M2/24‑1 (MQ=255)                        acgcaaacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGa                                                                                                                              <  2:268620‑M2/25‑1 (MQ=255)                             aacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcgccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCg                                                                                                                         <  1:575921‑M2/30‑1 (MQ=255)                             aacggaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCg                                                                                                                         <  2:514169‑M2/30‑1 (MQ=255)                                 gaaattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCg                                                                                                                     <  1:777834‑M2/34‑1 (MQ=255)                                   aattaccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGct                                                                                                                   <  2:902342‑M2/36‑1 (MQ=255)                                       accgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttt                                                                                                               >  1:959381‑M2/111‑150 (MQ=255)                                       accgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttt                                                                                                               >  2:426827‑M2/111‑150 (MQ=255)                                        ccgctgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttt                                                                                                               <  1:592858‑M2/40‑1 (MQ=255)                                            tgtgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCttttttt                                                                                                           >  1:1020468‑M2/106‑149 (MQ=255)                                              tgggcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTAc                                                                                                        <  1:368976‑M2/47‑1 (MQ=255)                                                ggcgatttacaactagtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcacaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTAcc                                                                                                       <  2:982019‑M2/48‑1 (MQ=255)                                                 gcgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCt                                                                                                      >  2:103337‑M2/101‑149 (MQ=255)                                                  cgatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGa                                                                                                    >  2:760104‑M2/100‑150 (MQ=255)                                                   gatttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGAt                                                                                                   <  2:563811‑M2/52‑1 (MQ=255)                                                      ttacaactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATaa                                                                                                 >  1:16258‑M2/96‑149 (MQ=255)                                                         caactggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAAt                                                                                              <  2:879599‑M2/57‑1 (MQ=255)                                                           actggtgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGTGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATg                                                                                             >  2:1027197‑M2/91‑148 (MQ=255)                                                                tgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTaa                                                                                      <  1:787625‑M2/65‑1 (MQ=255)                                                                tgaaaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTa                                                                                       >  1:374155‑M2/86‑149 (MQ=255)                                                                   aaacggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAg                                                                                    >  1:1070044‑M2/83‑149 (MQ=255)                                                                     acggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGAc                                                                                 <  1:986440‑M2/70‑1 (MQ=255)                                                                     acggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGAc                                                                                 <  2:413613‑M2/70‑1 (MQ=255)                                                                      cggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACt                                                                                <  2:920558‑M2/71‑1 (MQ=255)                                                                      cggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACt                                                                                <  2:967502‑M2/71‑1 (MQ=255)                                                                      cggtcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACt                                                                                >  2:700718‑M2/80‑150 (MQ=255)                                                                         tcgcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCg                                                                             <  2:1101885‑M2/74‑1 (MQ=255)                                                                           gcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGt                                                                            >  2:129350‑M2/75‑149 (MQ=255)                                                                           gcctggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTc                                                                           <  2:486201‑M2/76‑1 (MQ=255)                                                                              tggtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCAt                                                                         >  1:359786‑M2/72‑149 (MQ=255)                                                                                gtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATg                                                                        <  1:343904‑M2/79‑1 (MQ=255)                                                                                gtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATg                                                                        <  2:544860‑M2/79‑1 (MQ=255)                                                                                gtacgataacgaatatggcttcgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTGAAAGGACTGCGTCATGa                                                                       <  2:430161‑M2/80‑1 (MQ=255)                                                                                                     cgtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCtt                                                   <  2:16258‑M2/100‑1 (MQ=255)                                                                                                      gtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTcc                                                 <  1:103337‑M2/102‑1 (MQ=255)                                                                                                      gtcacgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTcc                                                 <  2:1095138‑M2/102‑1 (MQ=255)                                                                                                          cgcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCa                                            >  2:69911‑M2/44‑150 (MQ=255)                                                                                                           gcagcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCAt                                           >  1:1020486‑M2/43‑150 (MQ=255)                                                                                                             agcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATc                                          >  2:193115‑M2/41‑149 (MQ=255)                                                                                                              gcttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAAttttt                                                         <  2:840318‑M2/94‑1 (MQ=255)                                                                                                               cttattcgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGaa                                       >  2:742922‑M2/39‑150 (MQ=255)                                                                                                                     cgcaccctcgaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAAt                                  <  2:1074143‑M2/117‑1 (MQ=255)                                                                                                                              gaaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTc                        >  1:352128‑M2/24‑150 (MQ=255)                                                                                                                               aaaaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTcc                       <  2:1020468‑M2/128‑1 (MQ=255)                                                                                                                                 aaattcgctaaactctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCctc                     >  1:801258‑M2/21‑150 (MQ=255)                                                                                                                                            actctgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTaa          <  2:352128‑M2/141‑1 (MQ=255)                                                                                                                                                tgacgTGACACTGTGATCTAAAAAGTGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAAc        <  1:1027197‑M2/143‑1 (MQ=255)                                                                                                                                                tgacgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTg      >  1:631562‑M2/6‑150 (MQ=255)                                                                                                                                                  acgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACt       <  2:52407‑M2/144‑1 (MQ=255)                                                                                                                                                  acgTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGa    <  2:1070044‑M2/147‑1 (MQ=255)                                                                                                                                                    gTGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATg  <  1:426827‑M2/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGCTCTTTTTTTTACCTGATAAAATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATG  >  CP009273/1857883‑1858179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑