Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009273 4,303,167 Δ450 bp coding (1‑450/450 nt) rpiB → ribose 5‑phosphate isomerase B/allose 6‑phosphate isomerase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 4303167 4303616 450 133 [0] [0] 134 rpiB ribose 5‑phosphate isomerase B/allose 6‑phosphate isomerase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 43031660 (0.000)132 (0.880) 108/290 0.2 100% intergenic (‑358/‑1) alsR/rpiB d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR/ribose 5‑phosphate isomerase B/allose 6‑phosphate isomerase
?CP009273 4303617 = 0 (0.000)intergenic (+1/‑68) rpiB/yjdP ribose 5‑phosphate isomerase B/allose 6‑phosphate isomerase/putative periplasmic protein

Only 100 of 133 total aligned reads displayed.

TGGTGAGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAATGAAAAAGATTGCATTTGGCTGTGATCATGTCGGTTTCATTTTAAAACATGAAATAGTGGCACATTTAGTTGAGCGTGGCGTTGAAGTGATTGATAAAGGAACCTGGTCGTCAGAGCGTACTGATTATCCACATTACGCCAGTCAA  >  CP009273/4303018‑4303313
                                                                                                                                                    |                                                                                                                                                   
tGGTGAGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAg                                                                                                                                                    <  2:441221‑M1/150‑2 (MQ=255)
   tGAGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgatt                                                                                                                                                 >  1:666197‑M1/1‑146 (MQ=255)
    gAGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgatt                                                                                                                                                 >  2:2271485‑M1/1‑145 (MQ=255)
     aGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattca                                                                                                                                               <  1:1800333‑M1/150‑7 (MQ=255)
       tgtCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatc                                                                                                                                             <  1:914098‑M1/150‑9 (MQ=255)
       tgtCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatc                                                                                                                                             <  1:1807630‑M1/150‑9 (MQ=255)
         tCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatcca                                                                                                                                           >  1:1372237‑M1/1‑140 (MQ=255)
             tAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccacta                                                                                                                                        <  2:1012545‑M1/149‑14 (MQ=255)
              aaCGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactact                                                                                                                                      >  2:1551786‑M1/1‑135 (MQ=255)
              aaCGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactac                                                                                                                                       <  1:528886‑M1/149‑15 (MQ=255)
               aCGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactactt                                                                                                                                     <  1:753136‑M1/150‑17 (MQ=255)
               aCGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGCAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTCTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactactt                                                                                                                                     <  2:1881104‑M1/150‑17 (MQ=255)
                cGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttg                                                                                                                                    <  1:2406902‑M1/150‑18 (MQ=255)
                  cTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgca                                                                                                                                  >  2:684700‑M1/1‑131 (MQ=255)
                   tATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttg                                                                                                                                    >  2:2332701‑M1/1‑130 (MQ=255)
                    aTTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatg                                                                                                                                >  2:1100135‑M1/1‑129 (MQ=255)
                     ttGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatg                                                                                                                                <  2:299206‑M1/149‑22 (MQ=255)
                       gcgcTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggat                                                                                                                             >  1:1982469‑M1/1‑126 (MQ=255)
                        cgcTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggat                                                                                                                             <  2:1464882‑M1/149‑25 (MQ=255)
                          cTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgag                                                                                                                          >  2:112829‑M1/1‑123 (MQ=255)
                              cAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaat                                                                                                                      >  2:376983‑M1/1‑119 (MQ=255)
                                gATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatga                                                                                                                    <  1:1241309‑M1/150‑34 (MQ=255)
                                    tAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaa                                                                                                                <  2:2251363‑M1/150‑38 (MQ=255)
                                       ctctGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgt                                                                                                             <  1:1231326‑M1/150‑41 (MQ=255)
                                       ctctGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgt                                                                                                             >  1:1566434‑M1/1‑110 (MQ=255)
                                         ctGTAAAAGAGATCAGGAAGGCGTAATGCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgcgtaatgattaatgtg                                                                                                            >  2:2006636‑M1/1‑108 (MQ=255)
                                         ctGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtg                                                                                                            >  2:449422‑M1/1‑108 (MQ=255)
                                            tAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtgga                                                                                                          >  1:80048‑M1/1‑105 (MQ=255)
                                            tAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtgga                                                                                                          >  1:1028530‑M1/1‑105 (MQ=255)
                                            tAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtgga                                                                                                          >  1:1324698‑M1/1‑105 (MQ=255)
                                            tAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtgg                                                                                                           <  1:2168361‑M1/147‑43 (MQ=255)
                                            tAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtgg                                                                                                           <  1:1984544‑M1/147‑43 (MQ=255)
                                                aCAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagt                                                                                                    >  1:2156422‑M1/1‑101 (MQ=255)
                                                    aTCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttct                                                                                                <  1:62697‑M1/150‑54 (MQ=255)
                                                    aTCAGGAAGGCGTAATTCATCGATTTTGCGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttct                                                                                                >  2:2019100‑M1/1‑97 (MQ=255)
                                                            ggCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgagg                                                                                        >  1:804296‑M1/1‑89 (MQ=255)
                                                             gCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggt                                                                                       <  2:686058‑M1/150‑63 (MQ=255)
                                                                tAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttgg                                                                                    <  1:2394183‑M1/150‑66 (MQ=255)
                                                                tAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttgg                                                                                    <  2:894255‑M1/150‑66 (MQ=255)
                                                                tAATTCATAGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttgg                                                                                    >  2:2003612‑M1/1‑85 (MQ=255)
                                                                  aTTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggc                                                                                   >  1:861716‑M1/1‑83 (MQ=255)
                                                                    tCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaa                                                                                >  2:1171596‑M1/1‑81 (MQ=255)
                                                                      aTCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatg                                                                              <  2:98190‑M1/150‑72 (MQ=255)
                                                                       tCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatg                                                                              >  2:467836‑M1/1‑78 (MQ=255)
                                                                         gATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaa                                                                           <  1:1601206‑M1/150‑75 (MQ=255)
                                                                          aTTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaac                                                                          >  2:1166877‑M1/1‑75 (MQ=255)
                                                                            tttGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgc                                                                        >  1:306842‑M1/1‑73 (MQ=255)
                                                                            tttGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgc                                                                        >  1:768495‑M1/1‑73 (MQ=255)
                                                                               gggTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctt                                                                      <  2:1690985‑M1/149‑80 (MQ=255)
                                                                                  tgtTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccg                                                                  >  1:393049‑M1/1‑67 (MQ=255)
                                                                                  tgtTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccg                                                                  <  2:1390829‑M1/150‑84 (MQ=255)
                                                                                    tttttAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgc                                                                 <  2:2396682‑M1/149‑85 (MQ=255)
                                                                                      tttAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgcta                                                               <  1:624794‑M1/149‑87 (MQ=255)
                                                                                       ttAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaacgaaacgctttccgctat                                                              <  2:211980‑M1/149‑88 (MQ=255)
                                                                                        tAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctattt                                                            >  2:1769696‑M1/1‑61 (MQ=255)
                                                                                        tAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctattt                                                            >  2:1658786‑M1/1‑61 (MQ=255)
                                                                                        tAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatt                                                             <  1:921144‑M1/149‑89 (MQ=255)
                                                                                           ttCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttctt                                                         >  1:49174‑M1/1‑58 (MQ=255)
                                                                                           ttCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttctt                                                         >  2:585622‑M1/1‑58 (MQ=255)
                                                                                               ttAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttat                                                     >  2:1975350‑M1/1‑54 (MQ=255)
                                                                                                 aaCATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagcgtttctttttgaggttggctaatgaaacgctttccgctatttcttttatt                                                    >  2:1930287‑M1/1‑52 (MQ=255)
                                                                                                  aCATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattca                                                  >  1:1287461‑M1/1‑51 (MQ=255)
                                                                                                  aCATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattc                                                   <  2:1324698‑M1/149‑99 (MQ=255)
                                                                                                   cATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcac                                                 <  1:567964‑M1/150‑101 (MQ=255)
                                                                                                    aTCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcacc                                                >  2:1513791‑M1/1‑49 (MQ=255)
                                                                                                       acaAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccct                                              <  2:1011227‑M1/149‑104 (MQ=255)
                                                                                                         aaaTGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgtggttggctaatgaaacgctttccgctatttcttttattcaccttgct                                           >  2:1903238‑M1/1‑44 (MQ=255)
                                                                                                          aaTGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgct                                           >  1:1194442‑M1/1‑43 (MQ=255)
                                                                                                          aaTGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgct                                           >  2:1326760‑M1/1‑43 (MQ=255)
                                                                                                           aTGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctca                                         <  2:768495‑M1/150‑109 (MQ=255)
                                                                                                            tGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcac                                        <  1:1085743‑M1/150‑110 (MQ=255)
                                                                                                            tGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcac                                        <  2:966798‑M1/150‑110 (MQ=255)
                                                                                                            tGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcac                                        >  1:954493‑M1/1‑41 (MQ=255)
                                                                                                              ttttttGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacg                                       <  1:544996‑M1/149‑111 (MQ=255)
                                                                                                                ttttGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctg                                    >  2:1322327‑M1/1‑37 (MQ=255)
                                                                                                                ttttGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgct                                     <  1:1059403‑M1/149‑113 (MQ=255)
                                                                                                                ttttGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgct                                     <  2:80048‑M1/149‑113 (MQ=255)
                                                                                                                   tGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtc                                  >  1:763440‑M1/1‑34 (MQ=255)
                                                                                                                   tGATTGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtc                                  >  1:1108202‑M1/1‑34 (MQ=255)
                                                                                                                    gATTGTGAAGTTGTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcgccctgctcacgctgtcc                                 <  2:1993529‑M1/149‑117 (MQ=255)
                                                                                                                      ttGTGAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccacc                              <  2:1270578‑M1/150‑120 (MQ=255)
                                                                                                                        gtgAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgt                            >  2:1985568‑M1/1‑29 (MQ=255)
                                                                                                                         tgAAGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgtt                           >  2:1044531‑M1/1‑28 (MQ=255)
                                                                                                                           aaGTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttcc                         <  2:1535421‑M1/150‑125 (MQ=255)
                                                                                                                             gTTTTGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccgg                       >  2:583108‑M1/1‑24 (MQ=255)
                                                                                                                              ttttGCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggc                      <  2:306842‑M1/150‑128 (MQ=255)
                                                                                                                                  gCACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccag                  >  1:1977247‑M1/1‑19 (MQ=255)
                                                                                                                                   cACGGACGGGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccag                  <  1:996852‑M1/149‑132 (MQ=255)
                                                                                                                                      ggacggGGAAGATGAgattcatccactacttgcagggatgagtaatgattaatgcggatagagtttctttttgaggttggctaatgaaacgctttccgctatttgttttattcaccctgctcacgctgtccaccgttccggcccaggcc               >  1:2111887‑M1/1‑15 (MQ=255)
                                                                                                                                        acggGGAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgat            <  2:374890‑M1/150‑138 (MQ=255)
                                                                                                                                          ggggAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatat          >  2:63920‑M1/1‑11 (MQ=255)
                                                                                                                                           gggAAGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatatt         <  1:443246‑M1/150‑141 (MQ=255)
                                                                                                                                              aaGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatc      >  2:1396588‑M1/1‑7 (MQ=255)
                                                                                                                                               aGATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcg     <  1:1551786‑M1/150‑145 (MQ=255)
                                                                                                                                                gATGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcga    >  2:944633‑M1/1‑5 (MQ=255)
                                                                                                                                                 aTGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcgac   <  2:393049‑M1/150‑147 (MQ=255)
                                                                                                                                                 aTGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcgac   <  2:610351‑M1/150‑147 (MQ=255)
                                                                                                                                                 aTGAgattcatccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcgac   <  2:2087499‑M1/150‑147 (MQ=255)
                                                                                                                                                 aTGAgattcatcaactactttaatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcgac   <  1:1756093‑M1/150‑147 (MQ=255)
                                                                                                                                                  tGAgattcttccactacttgcatggatgagtaatgattaatgtggatagagtttctttttgaggttggctaatgaaacgctttccgctatttcttttattcaccctgctcacgctgtccaccgttccggcccaggccgatattatcgacg  <  2:2156422‑M1/150‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TGGTGAGTGTCTTTAACGCTATTGCGCTGTCAGATGTAACTCTGTAAAACAGATCAGGAAGGCGTAATTCATCGATTTTGGGTGTTTTTAATTCATTAACATCACAAATGTTTTTTGATTGTGAAGTTTTGCACGGACGGGGAAGATGAATGAAAAAGATTGCATTTGGCTGTGATCATGTCGGTTTCATTTTAAAACATGAAATAGTGGCACATTTAGTTGAGCGTGGCGTTGAAGTGATTGATAAAGGAACCTGGTCGTCAGAGCGTACTGATTATCCACATTACGCCAGTCAA  >  CP009273/4303018‑4303313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.