BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607566 =	100 (0.770)	25 (0.210) +CGCTCCGGT	10/254	4.8	22.3%	coding (409/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607637	87 (0.670)	25 (0.210) +CGCTCCGGT	10/254	4.8	22.3%	coding (480/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 102 total aligned reads displayed.

GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGG  >  NZ_CP034943/607428‑607697

gcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                    >  1:1952292/1‑140 (MQ=255)

gcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                    <  2:64881/140‑1 (MQ=255)

 cgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                   <  2:1095003/140‑1 (MQ=255)

 cgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                   <  2:1952292/140‑1 (MQ=255)

 ccacaggagcGACCGGCGACGCCGGCCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACGGGTGAAGGTGGACCAGATGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                   <  1:1684751/138‑1 (MQ=18)

   ccagcatcTACCGGCGCAGCCGCACCAGCCGGAGCCCCCGGCGCGTCAGGACCAACAGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                 <  1:1893537/133‑1 (MQ=14)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                 <  1:1018240/140‑1 (MQ=255)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                 <  1:999491/140‑1 (MQ=255)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                                                 <  1:999766/140‑1 (MQ=255)

   acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCAGCCGGGGAAGCTGGAGCAGATGGAGCGACGGGAGCTCACGGAGCTCGGGGAGAAGACGGAGCGGCCGGGGCCCCggg                                                                                                                                 >  1:1124721/1‑140 (MQ=17)

        cgcTCCCGGCGCAGCCGGACCAGCCGGAGCCACCGGAGCGACCGGAGCGACCGGCGCTACCGGCGAAGCCGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCca                                                                                                                            <  2:253612/139‑1 (MQ=17)

        cgcTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCGACCCGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCca                                                                                                                            <  2:812379/139‑1 (MQ=255)

        agcTACGGGGGAAGCCGGACCAGCCGGAGCCTCCGGAGCGACCGGAGCGACTGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCca                                                                                                                            <  2:342345/140‑1 (MQ=17)

         gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                                           <  1:223129/140‑1 (MQ=255)

          cTACCGGGGAAGCCGGACCCCACGGTGCGACTGGTGAGAGAGTAGAGAAAGGAGCTACCGGGGAAGCAGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                                          <  1:1026466/140‑1 (MQ=18)

            aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                        <  2:1761838/140‑1 (MQ=255)

            aCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCGACAGGATCTACAGGGGAAGCTGTAACATCTGGAGCGACGTGAGCGACATGAGCCACAGGGGAAGCAGGACCATCAGGAGCAACCGGATCGACAgg                                                                                                                        >  1:95245/1‑140 (MQ=12)

              cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGCGACCGGAGCTACCGGGGACCCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCCCCGGGGCCAGGGGCGCCACAgggg                                                                                                                      >  2:1648943/1‑140 (MQ=18)

                 ggACGCCGGCCCAGCCGGACCGACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGACGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                                                   <  1:1111360/140‑1 (MQ=18)

                 ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                                                   <  1:1729723/140‑1 (MQ=255)

                 ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCACCAGGAGCGACGGGAGCGACAGGAGCAACCGGCCAAGCCGGACCAGCCGGAGCCACGGGAGCCACAggcccaa                                                                                                                   >  1:1965168/1‑135 (MQ=18)

                 cgAAGCCGGACCAGCCGGACATACAGGAGCCACAGGAGCGACAGGAGCTACCGGGGAATCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTGCCGGTGCCACGGGAGCCACAGTGGCTa                                                                                                                   <  2:420978/139‑1 (MQ=18)

                            ccgCCGGAGCGACAGGAGCGACATGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGcc                                                                                                        <  1:1328002/138‑1 (MQ=255)

                            cAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGAGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGcc                                                                                                        <  1:1327880/140‑1 (MQ=255)

                                   agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                        >  2:1854753/1‑117 (MQ=255)

                                   agcgacaggagcgacaggagcgacaggAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                        <  1:1854753/117‑1 (MQ=255)

                                       acaggagcgactggagcgacaggagcTCCCGGCGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                             <  2:1135979/140‑1 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGGGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                             >  2:186373/1‑140 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                             >  2:557532/1‑140 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                             <  1:185385/140‑1 (MQ=255)

                                       acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                             <  1:1251560/140‑1 (MQ=255)

                                        caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa                                                                                            >  2:499626/1‑140 (MQ=255)

                                         aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCCTCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCAACTGGGGAAGCCGGACCAGCCGGAg                                                                                           <  2:778117/140‑1 (MQ=255)

                                         acgagcgacacgtcccacaggagcTACCGGGCAAGCGTGACGGGCGGCAGCGACGGTATCGACAGGCGCTACCTGTCAAGCCGGACCTGGGGGGGCCACTGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAg                                                                                           <  2:883452/138‑1 (MQ=16)

                                          ggagcgacaggagcgacaggagcTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAATCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGc                                                                                          >  1:116039/1‑140 (MQ=255)

                                          ggagcgacaggagcgacaggagcTACCGGGGAAGCAGGACCATCTGGAGCGACGGGAGCCACTGGAGCAACCGGGCCAGCCTGACGATCCGGGCCATCGGGAGCCACAGGCGCGAGTGGCGCAGCGGGGCGGGCGGGAGc                                                                                          >  1:1644337/1‑140 (MQ=9)

                                             gcgtcaggagcgactggcgcGACCGTTGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGGAACCTGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGTGAAGCCGGAGCAGCCGGAGCGAc                                                                                       <  1:1327989/140‑1 (MQ=21)

                                             gcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                       <  1:1886504/140‑1 (MQ=255)

                                             ccgacaggcgcgaccggtgcTACCGGGCAAGCTGGACCAGCGGGAGCGACGCGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                       <  1:919734/139‑1 (MQ=21)

                                             ccgacaggagcgacaggaccTTCCGCGGAAGCTGGACCATCGGGACTGACCTGAGCGATAGGAGCGACGGGGTAAGCGGGACCAGCCGGCGCCACGGGAGCGACTGGGGATACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                       <  1:1471268/139‑1 (MQ=16)

                                                acaggagcgactggcgcGACCGGGGCAGCTGGACGAGCTGGAGCGCCGGGAGCGACAGGAGCTTCCGGGGAAGCCGGACGAGCCGGGGACACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                    <  2:1446114/140‑1 (MQ=21)

                                                acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                    >  1:1249819/1‑140 (MQ=255)

                                                acaggagccacaggagccACCGGGCAAGCTGGACCAGCGGGCGCGACGGGAGCGACAGGAGCTACCGGCGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                    <  1:581570/140‑1 (MQ=21)

                                                  aggagcgacaggagcTACCGGGGACGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGGGCCACGGGCGCCACCGGGGCTCCGCGGGCAGCCGGACCAGCGGCAGCGCCAGGAg                                                                                  >  1:1259222/1‑140 (MQ=18)

                                                  aggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                  >  2:1358289/1‑140 (MQ=255)

                                                     agcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACTGGAGAGACCGGAGATCCCGGGGAAGCCGGACCGACCGGGGCCACCGGAGACACAGGGGCTACTGGGGACGCCGGACCAGCAGGCCGGACAGGAGCtc                                                                               >  1:944263/1‑139 (MQ=18)

                                                      gcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTCCGGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTAc                                                                              >  1:2343/1‑140 (MQ=255)

                                                      gcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCAGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAACCGGAGCGACAGGAGATAc                                                                              >  1:796667/1‑140 (MQ=255)

                                                         acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                           >  1:342678/1‑140 (MQ=255)

                                                              ctctcccGGGGACCCTGGACCAGCTGGAGAGACGTGAGCCTCCGGAGCTACCGTGGAAGGGGGACCAGCGGGCGCCACGGGAGCGACAGGGGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAg                                                                      <  2:1051001/135‑1 (MQ=17)

                                                              agcGACCGGGGCAGCTGGACCCGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                      <  2:1414364/140‑1 (MQ=255)

                                                               gcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCAGGAGCGACAGGAGCTACCgggcacgc                                                                     >  1:946631/1‑135 (MQ=21)

                                                                cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                    >  1:611199/1‑140 (MQ=255)

                                                                  aCCGGGGAAGCGGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                  <  1:951780/140‑1 (MQ=255)

                                                                       ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACTGGGGACGTCgg                                                                                                      <  2:472908/99‑1 (MQ=255)

                                                                       ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGTCgg                                                                                                      >  1:472908/1‑99 (MQ=255)

                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa                                                                                            <  1:304794/108‑1 (MQ=255)

                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa                                                                                            >  2:304794/1‑108 (MQ=255)

                                                                        gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACCGGAGCCACAGGGGAACCCGGAGAAACCGGAGCCCCCGGAGCGACAGGCGCTACCGGTGACGCCGGACCAGc                                                            >  2:1204882/1‑140 (MQ=17)

                                                                         aaGCTGGACCAGCTGGAGCGACGGGAGCGACAGGGGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                           <  1:186373/140‑1 (MQ=255)

                                                                         aaGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                           <  1:557532/140‑1 (MQ=255)

                                                                           gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                         >  1:174048/1‑140 (MQ=255)

                                                                             tGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                       >  2:1895148/1‑140 (MQ=255)

                                                                                acccccTGGAGCGACGGGAGCGACAGGCGCTCCCGGCGAAGCCGGAGCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                    <  1:1316604/135‑1 (MQ=17)

                                                                                 ctcccgggAGCCCCGTGAGCGACAGCACCTACCGCGGCAGCCGGACCAGCCGGGGACACGGGAGCCACAGGTCCACCTGGGGACGCCGGACCCCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                   <  2:1926406/134‑1 (MQ=9)

                                                                                 cggccgggAGCCACGGGCGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                   <  2:260676/134‑1 (MQ=17)

                                                                                  cctcTGGAGCGACGGGAGCCACAGCTGCTACCGGGCACGCCGGACCAGCCGGCGCCACCGGTGCGACAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                  <  2:1322158/137‑1 (MQ=17)

                                                                                    gccggAGCCCCGGGAGCGACCGGAGCCACCGGCGAACCCGGACCAGCCGGTGCGACGGGAGCCACAGGGGCTCCAGCGCAAGCCGGACCCCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                <  2:1797937/137‑1 (MQ=14)

                                                                                     cTGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                               <  2:1342908/140‑1 (MQ=255)

                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCAACTGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTa                                           >  2:829130/1‑140 (MQ=255)

                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGGCGGGAGCTa                                           >  2:148926/1‑140 (MQ=17)

                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCCACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAACCAGGACCAGCCGGAGCGACTGGAGcga                                           >  2:1265957/1‑138 (MQ=11)

                                                                                           ccccGGGAGCGACAGGAGCTACCGGAGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAca                                         <  1:1605984/137‑2 (MQ=11)

                                                                                             aCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                       >  1:1969505/1‑140 (MQ=255)

                                                                                              cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                      >  2:187171/1‑140 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                   <  2:1906881/46‑1 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                                                   >  1:1906881/1‑46 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                     >  1:957926/1‑140 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACCGGGGCTACAGGGGAAGCCGGACCAGCCGGATCGACAGGAGCTACAGGGTAAGCCGGACCACCCGGAGCGAGAGGAGCAACGgggg                                     >  1:24627/1‑140 (MQ=14)

                                                                                                  cgCGACAGGAGCCCCCGGCGCAGCGCGACCAGCCGGCGCCCCGGGAGCCACCGGCGCTCCGGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTTCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                  <  2:1751826/139‑1 (MQ=17)

                                                                                                  aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGGTCCTGGCGCAGCCGCACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTCCCGGGGAAg                                  >  2:1564125/1‑140 (MQ=17)

                                                                                                  aGCGACAGGAGCAACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                  <  2:1954763/140‑1 (MQ=255)

                                                                                                  aGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACTGGGGCTTCTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                  <  1:1142336/140‑1 (MQ=255)

                                                                                                   gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCGACTGGAGCCACAGGGGCTACTGGTGAAGCCGGAGCGGCCGGAGCGACATGAGCTACCGGCGAAGCCGGACCAGGGGGAGCGCCAGGAGCAACCGGGGAAGc                                 >  2:472414/1‑140 (MQ=14)

                                                                                                    ccaCAGGAGCACCCGGCGCAGCCGGACCACCCGGCGCCACGGGCGCAACAGGGGCATCTGGGGCAGCCGGACCCGCCGGAGCCACAGGCGCTACCGGGGAAGCGGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGcc                                <  2:431159/138‑1 (MQ=17)

                                                                                                       cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                                                                                    <  1:238722/37‑1 (MQ=40)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                          <  1:1441446/55‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                          >  2:1441161/1‑55 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                          >  2:1441446/1‑55 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                                          <  1:1441161/55‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACGGGGGCCGCCGGCCCaggcgg                     >  1:1649502/1‑135 (MQ=14)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGGCCAACCgg                     <  1:1895148/140‑1 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                        <  2:1204542/35‑1 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                                                        >  1:1204542/1‑35 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                               <  2:1413551/76‑1 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                               >  1:1413551/1‑76 (MQ=255)

                                                                                                                        gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg            <  1:187171/140‑1 (MQ=255)

                                                                                                                             aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa       <  1:1358289/140‑1 (MQ=255)

                                                                                                                                 gCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACAGGGCAAACCGGACAAAACGGAGCGACAGGAGATAcacg   >  1:1808983/1‑137 (MQ=17)

                                                                                                                                  ccGGGGCCACGGGAGCCCCCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg  <  1:513008/140‑1 (MQ=255)

GCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGG  >  NZ_CP034943/607428‑607697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.