| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 3756498 = | 349 (1.160) | 4 (0.010) | 3/234 | NT | 1.2% | coding (130/678 nt) | EO946_RS19340 | CidB/LrgB family autolysis modulator |
| ? | NZ_CP034943 | = 3756494 | 335 (1.200) | coding (126/678 nt) | EO946_RS19340 | CidB/LrgB family autolysis modulator | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/3756645‑3756498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTTTTT < NZ_CP034943/3756494‑3756358 TCAAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACC < 2:1551215/140‑1TCAAAATAATTTCCACTGAGTATTTCTTTAAAACACGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGGACGGGACATTCACC < 2:1540894/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATCTGACTCGTACGGGACATTCACCAG < 1:2971202/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 1:161604/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:3668839/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:3082403/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:2456137/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:1584185/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:1539321/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:3860506/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 1:2971726/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:4309844/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 1:1747738/140‑1 AAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCACCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 1:824248/140‑1 AAAATAATTTCCACTGCGTATTACATTAAAACAGCGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:4398745/140‑1 AAAATAATGTCCACGGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:3758760/140‑1 AAAATAAGTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:3289946/140‑1 AAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGC < 1:4414066/140‑1 AAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGC < 1:1953363/140‑1 TAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGC < 2:4169747/140‑1 AATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCA > 2:3307945/1‑140 AATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCA > 2:3295387/1‑140 ATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAG > 2:481046/1‑140 ATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG < 2:896674/96‑1 ATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAG > 1:896674/1‑96 TGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTT < 1:243226/140‑1 TGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTT < 1:243193/140‑1 AAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTG < 1:1245676/140‑1 GTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATA > 2:3729948/1‑140 CAGCAGCATACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGAAACGCGGAAAGCGTTGATATACCTTTTTTGCGCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCAGATGAACACGTATG > 2:492517/1‑140 CAGCAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCAGATGAACACTTATG > 2:4761843/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATTAACACGTATGTTT > 2:621566/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 2:3302148/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 2:3302379/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 2:3109519/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 1:2639497/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 1:2638859/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 2:4396044/1‑140 CAGCAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTCTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTT > 2:3109777/1‑140 CAGACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTTTTT > 2:1836671/1‑140 TCAAAATAATTTCCACTGCGTATTTCTTTAAAACAGGGAAATATTTATAAAGCGGGATCGCGAATGCCACGGTGGCCGGCTGAAGCATATCGGTCAGCAATCCGCCGCCGAGATTATATGACTCGTACGGGACATTCACCAGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/3756645‑3756498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagACCGACTAACACAGCGGGCGTCACCAATAGCGGCGACGTATAGACACGCGGAAAGCGTTGATATACCTTTTTTGCTCCTATATACACCAAAACTGTTAAAAACAAACTTACAATTCCGATGAACACGTATGTTTTTT < NZ_CP034943/3756494‑3756358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |