BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 322107	260 (1.010)	2 (0.010) +AAG	3/242	NT	0.77%	pseudogene (55/570 nt)	EO946_RS01795	hypothetical protein
*	?	NZ_CP034943	322108 =	261 (1.000)	2 (0.010) +AAG	3/242	NT	0.77%	pseudogene (56/570 nt)	EO946_RS01795	hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 297 total aligned reads displayed.

TTTTCATTTATTCGTTGCAGAAGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTCATCATT  >  NZ_CP034943/321969‑322244

     aTTTATTCGTTGCAGAAGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAg                                                                                                                                     <  1:590083/140‑1 (MQ=255)

        tATTCGTTGCAGAAGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAAc                                                                                                                                  >  1:1686769/1‑140 (MQ=255)

        aaatCGTTGCAGAAGATCAGTATTTTATTCAAACATGTAAGCAATAATACATTCGTAAAAGTGAGGGAGGAAGGTCATGAATAATCTGAATAACAGACTTTCAGGAGTGAATGGGAAAAATAAGAGAGTAAAAAAATaaa                                                                                                                                  >  2:3428638/4‑139 (MQ=255)

               tGCAGAAGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAAt                                                                                                                           >  1:2361734/1‑140 (MQ=255)

                    aaGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGt                                                                                                                      <  1:232332/140‑1 (MQ=255)

                      gcgcAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATATTCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCg                                                                                                                    <  2:3626999/140‑1 (MQ=255)

                      gcgcAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCg                                                                                                                    <  2:1480849/140‑1 (MQ=255)

                           ggCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAt                                                                                                               <  2:2361734/140‑1 (MQ=255)

                           ggCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAt                                                                                                               <  2:2895408/140‑1 (MQ=255)

                           ggCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAt                                                                                                               <  2:3241846/140‑1 (MQ=255)

                           ggCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAt                                                                                                               <  2:3886979/140‑1 (MQ=255)

                           ggCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAt                                                                                                               <  2:809506/140‑1 (MQ=255)

                               gTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTggg                                                                                                           <  1:1465805/140‑1 (MQ=255)

                               gTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTggg                                                                                                           <  1:3127987/140‑1 (MQ=255)

                                 tATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAATGAACAAAAAATCTGGTCGGAGATTGGgat                                                                                                         >  1:2912867/1‑140 (MQ=255)

                                 tATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGgat                                                                                                         >  2:3574786/1‑140 (MQ=255)

                                 tATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGAATTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGgat                                                                                                         <  2:1593035/140‑1 (MQ=255)

                                      tAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAg                                                                                                    >  2:3722509/1‑140 (MQ=255)

                                      tAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAg                                                                                                    >  1:225625/1‑140 (MQ=255)

                                      tAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAg                                                                                                    >  1:3354656/1‑140 (MQ=255)

                                      tAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAg                                                                                                    >  2:2695847/1‑140 (MQ=255)

                                      tAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTAGGAGATTGGGATGATAg                                                                                                    >  2:2150727/1‑140 (MQ=255)

                                        aCATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTACAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCg                                                                                                  >  1:3997285/1‑140 (MQ=255)

                                         cATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCgg                                                                                                 <  1:1808852/140‑1 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                >  1:2703751/1‑140 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                <  2:2084589/140‑1 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                <  1:3008134/140‑1 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                <  2:4160555/140‑1 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                >  2:4201231/1‑140 (MQ=255)

                                          aTGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCAGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTACAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                <  1:43091/140‑1 (MQ=255)

                                           tGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGACAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGAGTGGGATGATGGCGGGa                                                                                               >  2:490315/1‑140 (MQ=255)

                                            gTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAg                                                                                              >  1:307336/1‑140 (MQ=255)

                                             taagccataagccaTTCGTAAACGTGCGGGAGGACGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGc                                                                                             >  1:404881/1‑140 (MQ=255)

                                                    taagccatTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCTGGAGCGTTTACg                                                                                      >  2:4284300/1‑140 (MQ=255)

                                                    taagccatTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACg                                                                                      >  2:1913067/1‑140 (MQ=255)

                                                    taagccatTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACg                                                                                      <  1:2753444/140‑1 (MQ=255)

                                                     aagccatTCGTAAAAGTGAGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGCTTGGGATGATAGCGGGAGCGTTTACGt                                                                                     >  1:2797530/1‑140 (MQ=255)

                                                       gccatTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTg                                                                                   <  1:1018719/140‑1 (MQ=255)

                                                         catTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCt                                                                                 <  2:2610958/140‑1 (MQ=255)

                                                          atTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCtt                                                                                >  2:1306771/1‑140 (MQ=255)

                                                           ttCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTg                                                                               >  2:948728/1‑140 (MQ=255)

                                                           ttCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTg                                                                               >  1:2280479/1‑140 (MQ=255)

                                                           ttCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGCAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTg                                                                               >  2:2406409/1‑140 (MQ=255)

                                                            tCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGa                                                                              >  1:2621168/1‑140 (MQ=255)

                                                            tCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGa                                                                              >  1:488201/1‑140 (MQ=255)

                                                                     tGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGt                                                                     >  1:1262087/1‑140 (MQ=255)

                                                                       cGGGAGGACCGTCATGAATAATCTGCATAACAGACTTTCAGGGGTGAATGGGAACAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTcc                                                                   >  2:3204841/1‑140 (MQ=255)

                                                                       cGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCggg                                                                                                >  1:68519/1‑111 (MQ=255)

                                                                       cGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTcc                                                                   >  2:1989560/1‑140 (MQ=255)

                                                                        gggAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCcg                                                                  <  2:2759790/140‑1 (MQ=255)

                                                                        gggAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCcg                                                                  <  1:1440151/140‑1 (MQ=255)

                                                                        gggAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCcg                                                                  <  2:3274299/140‑1 (MQ=255)

                                                                         ggaggaAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCcgc                                                                 <  1:9372/140‑1 (MQ=255)

                                                                             gaATGTAATGAATAATCTGCATAACAGACTTTCAGGAGTTAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCa                                                             <  1:3815923/140‑1 (MQ=255)

                                                                             gaAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGGAAAATAAGAGAGTCAAAAAAGAAGAAAAACTCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTGGCTGGATGTGATGGTCCGCGGCa                                                             >  2:533426/1‑140 (MQ=255)

                                                                               aGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCAtt                                                           >  1:3394977/1‑140 (MQ=255)

                                                                               aGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCAta                                                           >  1:2451371/1‑139 (MQ=255)

                                                                                 gTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTAt                                                         >  2:3654629/1‑140 (MQ=255)

                                                                                 gTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTAt                                                         >  2:860950/1‑140 (MQ=255)

                                                                                    aTGAATAATCTGCGTAATAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAaagaaaaagaacaaaaaatctggtcggagattgggatgatagcgggagcatttgcgctgcttgatgtgatcatccgcggcattat                                                      >  1:1044445‑M1/1‑55 (MQ=255)

                                                                                    aTGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCAGTATGtt                                                      >  2:4077031/1‑140 (MQ=255)

                                                                                           atCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAAttt                                               >  1:21856/1‑140 (MQ=255)

                                                                                            tCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGt                                                                                     >  1:3274001/1‑101 (MQ=255)

                                                                                            tCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGt                                                                                     >  1:3524844/1‑101 (MQ=255)

                                                                                            tCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTc                                              >  2:1800242/1‑140 (MQ=255)

                                                                                            tCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTc                                              >  1:3681585/1‑140 (MQ=255)

                                                                                              tGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCg                                            >  1:3934605/1‑140 (MQ=255)

                                                                                              tGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGAGGTGATTGTCCGCGGCATTATGTTTGAATTTCCg                                            >  1:3156985/1‑140 (MQ=255)

                                                                                                cATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAATAAGAACAAAAAATCTGGTCGGAGAGTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCGGCGGCAGTATGTTTGAATTTCCGtt                                          >  1:2831126/1‑140 (MQ=255)

                                                                                                cATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGtt                                          >  2:740614/1‑140 (MQ=255)

                                                                                                cATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGtt                                          >  1:3625119/1‑140 (MQ=255)

                                                                                                 aTAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGttt                                         <  2:933153/140‑1 (MQ=255)

                                                                                                 aTAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGGTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGttt                                         <  1:1629268/140‑1 (MQ=255)

                                                                                                     cAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTACAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTCAAg                                     >  2:1179665/1‑140 (MQ=255)

                                                                                                          tttCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATgg                                >  2:2420141/1‑140 (MQ=255)

                                                                                                          tttCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATgg                                >  2:3855304/1‑140 (MQ=255)

                                                                                                             cAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCt                             >  2:1000369/1‑140 (MQ=255)

                                                                                                             cAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCt                             >  2:4227302/1‑140 (MQ=255)

                                                                                                                   tGAATGGGAAAAATAAGAGAGTAAAAAAACAACAAAAAATCTGGTCGGAGATTGGGATCATAGCGGGAGCGTTTACGGTGATTGAGGTCATTGTCCGCGGCATTAGTGTTGAATGTCCCGTTAAAGATTCTGCTGCaggg                       >  2:2477844/1‑137 (MQ=255)

                                                                                                                     aaTGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCt                     >  1:1101245/1‑140 (MQ=255)

                                                                                                                       tGGTAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGAGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTtg                   <  2:3027166/140‑1 (MQ=255)

                                                                                                                          gAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTgtgt                >  1:71272/1‑140 (MQ=255)

                                                                                                                                 aaGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGtt         <  2:3393787/140‑1 (MQ=255)

                                                                                                                                 aaGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGtt         <  1:3428638/140‑1 (MQ=255)

                                                                                                                                 aaGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGtt         <  2:616370/140‑1 (MQ=255)

                                                                                                                                 aaGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGtt         <  2:2186278/140‑1 (MQ=255)

                                                                                                                                 aaGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGtt         <  2:307336/140‑1 (MQ=255)

                                                                                                                                      cttAAAAAAAGAAAAAAAAATCTGGTCGGAGAGTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGGTGCAAGCCTTGTGTTTTTTTtcatca    <  2:2810364/138‑1 (MQ=255)

                                                                                                                                      attAAAAAAATAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCTTTTAGGTTTCTTGATGTGATTGTCGGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  2:1421625/138‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACCACACATCTGGTCGGAGATTGTGATGATAGCGTGAGCGTTGACGTTGCTTGATGTGATTGTCCGCGGCATTATGTATGAATTTCCGGTTAAAGAAGGGGCTGCAAGCCTTGTGTTTTTGGtcatca    <  1:2065084/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  2:225625/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  1:4101978/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  1:798715/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  2:556767/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  2:659397/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  1:372765/140‑1 (MQ=255)

                                                                                                                                      agTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTtcatca    <  1:4201231/140‑1 (MQ=255)

                                                                                                                                       gTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTcatcat   <  2:18429/140‑1 (MQ=255)

                                                                                                                                        tAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCCAGCCTTGTGTTTTTGTTCATCAtt  >  2:2944780/1‑140 (MQ=255)

                                                                                                                                        tAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTCATCAtt  >  2:1055763/1‑140 (MQ=255)

TTTTCATTTATTCGTTGCAGAAGCGCAGGCTGTTATTGTAACATGTAAGCCATAAGCCATTCGTAAAAGTGCGGGAGGAAGGTCATGAATAATCTGCATAACAGACTTTCAGGCGTGAATGGGAAAAATAAGAGAGTAAAAAAAGAACAAAAAATCTGGTCGGAGATTGGGATGATAGCGGGAGCGTTTACGTTGCTTGATGTGATTGTCCGCGGCATTATGTTTGAATTTCCGTTTAAAGAATGGGCTGCAAGCCTTGTGTTTTTGTTCATCATT  >  NZ_CP034943/321969‑322244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.