BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	1222275 =	266 (1.820)	3 (0.020)	3/242	NT	1.2%	coding (52/159 nt)	yjcZ	sporulation protein YjcZ
*	?	NZ_CP034943	= 1222271	255 (1.820)	3 (0.020)	3/242	NT	1.2%	coding (48/159 nt)	yjcZ	sporulation protein YjcZ
Rejected: Frequency below/above cutoff threshold.

Only 100 of 289 total aligned reads displayed.

ATCATAAATCCGCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTGATGTCCTG  >  NZ_CP034943/1222136‑1222414

acaatcataaatccgcaaacgccctatgcgaatatccaagccgattaaggctgcacacatagtgtatagagagtaaaggaggtgcttaactatgggctttggatacggattcggaggcggctacggcggcggctgttatg                                                                                                                                             <  1:102878‑M1/1‑1 (MQ=255)

  cATAAATCCGCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATggcggc                                                                                                                                           >  1:2172578/1‑140 (MQ=255)

   atcataaatccgcaaacgccctatgcgaatatccaagccgattaaggctgcacacatagtgtatagagagtaaaggaggtgcttaactatgggctttggatacggattcggaggcggctacggcggcggctgttatGGCg                                                                                                                                          <  2:2171383‑M1/4‑1 (MQ=255)

           gCAAACGCCCTATGCGAATATCCAAGCCGATTCAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCt                                                                                                                                  >  1:1343324/1‑140 (MQ=255)

           gCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCt                                                                                                                                  >  1:637565/1‑140 (MQ=255)

           gCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCt                                                                                                                                  >  2:1872856/1‑140 (MQ=255)

           gCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCt                                                                                                                                  >  1:1080527/1‑140 (MQ=255)

           gCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCt                                                                                                                                  >  2:250616/1‑140 (MQ=255)

                     tATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTAcg                                                                                                                        <  2:2070603/140‑1 (MQ=255)

                        gCGAAGAACCACGCCGATTAAGGCTGCACACATAGGGTATAGAGAGTAACGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTAcggcg                                                                                                                     <  2:1462191/140‑1 (MQ=255)

                               tCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTa                                                                                                              <  1:1666244/140‑1 (MQ=255)

                                         ttAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACa                                                                                                    >  1:749712/1‑140 (MQ=255)

                                         ttAAGGCTACACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACa                                                                                                    >  1:981903/1‑140 (MQ=255)

                                             ggCTGCACACATAGTGTATAGAGAGTAAACGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTg                                                                                                <  2:1505812/140‑1 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  2:10395/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  2:1592288/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  1:458259/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  2:1522937/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  1:2198502/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  1:1236644/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  2:220717/1‑140 (MQ=255)

                                                  cacacaTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCtt                                                                                           >  2:1732122/1‑140 (MQ=255)

                                                       aTAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGt                                                                                      >  1:2051217/1‑140 (MQ=255)

                                                        tAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTCTGGTTCAACATTTGTTCTTTTAGTc                                                                                     >  2:680085/1‑140 (MQ=255)

                                                        tAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTCGTc                                                                                     >  1:1322050/1‑140 (MQ=255)

                                                          gtgtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTg                                                                                                <  2:677925/127‑1 (MQ=255)

                                                            gtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 <  2:2246181/140‑1 (MQ=255)

                                                            gtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 <  1:457361/140‑1 (MQ=255)

                                                            gtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 >  1:900638/1‑140 (MQ=255)

                                                            gtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 <  2:1901859/140‑1 (MQ=255)

                                                            gtATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTAATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 <  2:483859/140‑1 (MQ=255)

                                                               taGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTCTGGTTCAACATTTGTTCTTTTAGTCGTATTGt                                                                              >  1:48514/1‑140 (MQ=255)

                                                               taGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGt                                                                              >  1:1517202/1‑140 (MQ=255)

                                                               taGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGt                                                                              >  1:1492193/1‑140 (MQ=255)

                                                                 gagagTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGATGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTc                                                                            >  2:22505/1‑140 (MQ=255)

                                                                  agagTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCa                                                                           <  2:1022855/140‑1 (MQ=255)

                                                                  agagTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCa                                                                           >  1:1439200/1‑140 (MQ=255)

                                                                   gagTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCAt                                                                          >  1:1460635/1‑140 (MQ=255)

                                                                    agTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGTCTACGGCGGCGGATGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAAAATTTGTTCTTTTAGTAGTATTGTTCAtt                                                                         >  2:1309841/1‑140 (MQ=255)

                                                                    agTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCAtt                                                                         >  2:2104063/1‑140 (MQ=255)

                                                                    agTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCAtt                                                                         <  1:71517/140‑1 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTCGTCGTATTGTTCATtc                                                                        >  2:1091056/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTAt                                                                                 >  1:1003097/1‑131 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCAttg                                                                        >  2:1822557/1‑139 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:55381/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:1979471/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:1911872/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  2:2366397/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:1709922/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  2:325207/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  2:456691/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:1412815/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  1:1373692/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  2:871074/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtc                                                                        >  2:1123114/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTGTTAGTCGTATTGTTCATtc                                                                        >  2:974981/1‑140 (MQ=255)

                                                                     gTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTATTTTAGTCGTATTGTTCATtc                                                                        >  2:1965572/1‑140 (MQ=255)

                                                                              gTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCa                                                                           >  2:1570178/1‑128 (MQ=255)

                                                                              gTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCa                                                                           <  1:1570178/128‑1 (MQ=255)

                                                                                gCTTAACTCTGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTCTTGTTCATTCTCCTTatgagc                                                             >  1:1096951/1‑136 (MQ=255)

                                                                                     aCTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTggg                                                        >  1:1582745/1‑140 (MQ=255)

                                                                                         tGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATtct                                                                       <  2:1351093/121‑1 (MQ=255)

                                                                                         tGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCa                                                    >  2:1860117/1‑140 (MQ=255)

                                                                                          gggCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCAt                                                   <  2:711420/140‑1 (MQ=255)

                                                                                          gggCTGTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCAt                                                   <  2:900638/140‑1 (MQ=255)

                                                                                           atgggctttggatacggattcggcggcggctacggcggcggctgttatGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGtt                                                                                                         >  1:680070‑M1/49‑85 (MQ=255)

                                                                                                tGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCttttt                                             >  2:1001527/1‑140 (MQ=255)

                                                                                                  gaaaCGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  1:1123114/137‑1 (MQ=255)

                                                                                                  gATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  1:410047/140‑1 (MQ=255)

                                                                                                  gATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  1:1872856/140‑1 (MQ=255)

                                                                                                  gATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  1:250616/140‑1 (MQ=255)

                                                                                                  gATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  1:10395/140‑1 (MQ=255)

                                                                                                  gATACGGATTCGGAGGCGGCTACGGCGGCCTCTGTTATGGCGGCGGTTATGCTGGCTGTTACGGAGGCGGGTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTACTTATCATCGTGGGTGCATCTTTTtat                                           <  1:2244945/140‑1 (MQ=255)

                                                                                                       ggATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACtt                                      >  1:660007/1‑140 (MQ=255)

                                                                                                        gATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTc                                     >  1:292509/1‑140 (MQ=255)

                                                                                                         aTTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCt                                    <  2:1503202/140‑1 (MQ=255)

                                                                                                         aTTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCt                                    <  1:2418172/140‑1 (MQ=255)

                                                                                                         aTTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCt                                    <  1:1737019/140‑1 (MQ=255)

                                                                                                            cGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           <  2:2010236/130‑1 (MQ=255)

                                                                                                            cGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           >  1:2010236/1‑130 (MQ=255)

                                                                                                            cGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAg                                 >  1:1766435/1‑140 (MQ=255)

                                                                                                            cGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAg                                 >  1:1166288/1‑140 (MQ=255)

                                                                                                            cGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAg                                 >  1:1012789/1‑140 (MQ=255)

                                                                                                                   ggcTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTtat                                           >  1:2297594/1‑123 (MQ=255)

                                                                                                                   ggcTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTAtt                          <  2:1176938/140‑1 (MQ=255)

                                                                                                                      tACTGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCTGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:1107871/140‑1 (MQ=255)

                                                                                                                      tACTGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCGTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:1420015/140‑1 (MQ=255)

                                                                                                                      tACGGGGGCGGCTGTTTTGGCGGCGGTTATGCTGGCTGTTTCTGCGGCGGCTTTGGTTCAACTTTTTTTCTTTTAGTCGTTTTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:1236644/140‑1 (MQ=255)

                                                                                                                      tACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:29523/140‑1 (MQ=255)

                                                                                                                      tACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:458223/140‑1 (MQ=255)

                                                                                                                      tACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAg                       <  2:1708113/140‑1 (MQ=255)

                                                                                                                        cggcggcggCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAggg                     <  2:637565/140‑1 (MQ=255)

                                                                                                                        cggcggcggCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAggg                     <  2:749712/140‑1 (MQ=255)

                                                                                                                        cggcggcggCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAggg                     <  2:826277/140‑1 (MQ=255)

                                                                                                                                   gTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTCGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTg          <  2:1769787/140‑1 (MQ=255)

                                                                                                                                   gTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTg          <  1:325207/140‑1 (MQ=255)

                                                                                                                                   gTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTg          <  1:68378/140‑1 (MQ=255)

                                                                                                                                        ggcggcGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTGATGTc     <  1:1592288/140‑1 (MQ=255)

                                                                                                                                           GGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTGATGTCCTg  >  2:601557‑M1/1‑140 (MQ=255)

                                                                                                                                           GGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTGATGTCCTg  >  1:83196‑M1/1‑140 (MQ=255)

ATCATAAATCCGCAAACGCCCTATGCGAATATCCAAGCCGATTAAGGCTGCACACATAGTGTATAGAGAGTAAAGGAGGTGCTTAACTATGGGCTTTGGATACGGATTCGGAGGCGGCTACGGCGGCGGCTGTTATGGCGGCGGTTATGCTGGCGGTTACGGCGGCGGCTATGGTTCAACATTTGTTCTTTTAGTCGTATTGTTCATTCTCCTTATCATCGTGGGTGCATCTTTTTATAACTTCTAAGGTTTATTGAGGGAAGTACGGGTGATGTCCTG  >  NZ_CP034943/1222136‑1222414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.