BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3777195	364 (1.160)	5 (0.020) +AAGACCGCATGAAACGAGCGGTCTTT	3/200	NT	2.1%	intergenic (‑111/+129)	ywaC/EO946_RS19460	GTP pyrophosphokinase YwaC/DUF2199 domain‑containing protein
*	?	NZ_CP034943	3778186 =	237 (0.760)	5 (0.020) +AAGACCGCATGAAACGAGCGGTCTTT	3/200	NT	2.1%	intergenic (‑350/+4)	EO946_RS19460/EO946_RS19465	DUF2199 domain‑containing protein/1,4‑dihydroxy‑2‑naphthoate polyprenyltransferase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 405 total aligned reads displayed.

TCGTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCTTAATCATTAT  >  NZ_CP034943/3777056‑3777334

tCGTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACaaaaa                                                                                                                                             >  2:474439/1‑140 (MQ=255)

 cGTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAaaag                                                                                                                                            <  2:3419182/140‑1 (MQ=255)

  gTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCTTGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAAGTTTTTTACAAAATGCGGTCGAATGTAACAAaaaga                                                                                                                                           >  2:3321083/1‑140 (MQ=255)

  gTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAaaaga                                                                                                                                           >  2:127347/1‑140 (MQ=255)

          gtgtTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAAAAAAAAGAAAGCCaat                                                                                                                                   >  2:1426340/1‑140 (MQ=255)

            gtTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCaataa                                                                                                                                 <  1:4967633/140‑1 (MQ=255)

            gtTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCaataa                                                                                                                                 <  1:3398346/140‑1 (MQ=255)

             ttACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCaataat                                                                                                                                >  2:1658991/1‑140 (MQ=255)

             ttACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCaataat                                                                                                                                >  1:195856/1‑140 (MQ=255)

              taaataTAAATCCATGTTCGTCTTATCCTTTATCTGATCTTTAACCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAAATTTTTTCCAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAataata                                                                                                                               <  2:2346531/135‑1 (MQ=255)

                  gATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCt                                                                                                                           >  1:105840/1‑140 (MQ=255)

                  gATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCt                                                                                                                           >  2:741557/1‑140 (MQ=255)

                   aTAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGTTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTa                                                                                                                          <  2:4340338/140‑1 (MQ=255)

                   aTAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTa                                                                                                                          <  2:3114255/140‑1 (MQ=255)

                   aTAAATCCATGTTAGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTa                                                                                                                          <  2:2409597/140‑1 (MQ=255)

                       aTCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAg                                                                                                                      >  1:781803/1‑140 (MQ=255)

                        tCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAACGCCAATAATACGCTAACAGa                                                                                                                     >  2:1539500/1‑140 (MQ=255)

                             gTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAataata                                                                                                                               >  2:4443002/1‑125 (MQ=255)

                                 gTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCtttt                                                                                                            >  2:4230427/1‑140 (MQ=255)

                                 gTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCtttt                                                                                                            >  2:1897918/1‑140 (MQ=255)

                                  tCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTGTTc                                                                                                           >  2:3605829/1‑140 (MQ=255)

                                     tctcCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGAt                                                                                                        <  1:2593628/140‑1 (MQ=255)

                                       tcCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGa                                                                                                      >  1:2068367/1‑140 (MQ=255)

                                         cTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAgg                                                                                                    >  1:3199913/1‑140 (MQ=255)

                                               cGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAg                                                                                              >  1:1101751/1‑140 (MQ=255)

                                               cGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAg                                                                                              <  1:1229253/140‑1 (MQ=255)

                                                   tCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAGATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAt                                                                                          >  2:2904670/1‑140 (MQ=255)

                                                   tCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGACAAAGTTAt                                                                                          >  2:4514029/1‑140 (MQ=255)

                                                   tCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAATGTTAt                                                                                          >  2:2182209/1‑140 (MQ=255)

                                                   tCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAt                                                                                          >  2:1594868/1‑140 (MQ=255)

                                                    cattAGCCGCAGCCCAGGTACTAGCGGTGCCGGCCTGCAGCAGGGTTTTATGAACTTTTTTACACAATGCGGTCGAATGTAACACAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:3018503/138‑1 (MQ=255)

                                                    cTTTATCCTCGGTCCATGTACTAGACGTGCCTGCCTGCAGCATGTTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCGTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:1705624/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGACAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:892468/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTCACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:2503705/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:5131991/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:4995249/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:816623/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:2685321/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:1134753/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:954970/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:938934/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:3319598/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:2423706/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:2243191/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:1893558/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:4286294/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:1823340/140‑1 (MQ=255)

                                                    cTTTATCCGCTGTCCATGTACGAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  2:2004685/140‑1 (MQ=255)

                                                    cTTGATCCGCTGTCCATGTACTAGACGTGCCGGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         <  1:3514063/140‑1 (MQ=255)

                                                         tCCGCTGTCCCTGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGta                                                                                    <  1:2162572/140‑1 (MQ=255)

                                                          ccGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGtat                                                                                   <  1:647776/140‑1 (MQ=255)

                                                              tGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAaaaga                                                                                                                                           <  1:4421089/80‑1 (MQ=255)

                                                              tGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGACAAAGTTATTCAGTATAGAc                                                                               >  1:4174618/1‑140 (MQ=255)

                                                              tGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGAc                                                                               >  1:60562/1‑140 (MQ=255)

                                                              tGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGAc                                                                               >  1:4719339/1‑140 (MQ=255)

                                                               gTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACt                                                                              <  1:1335405/140‑1 (MQ=255)

                                                               gTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACt                                                                              <  1:899535/140‑1 (MQ=255)

                                                                   aTGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTtaat                                                                          <  1:4104763/140‑1 (MQ=255)

                                                                          aGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAatat                                                                   >  1:2520184/1‑140 (MQ=255)

                                                                          aGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAatat                                                                   >  1:3145997/1‑140 (MQ=255)

                                                                           gACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAAtata                                                                  >  2:3478412/1‑140 (MQ=255)

                                                                             cGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATaaa                                                                <  1:1631763/140‑1 (MQ=255)

                                                                             cGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATaaa                                                                <  1:3570353/140‑1 (MQ=255)

                                                                              gTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGa                                                                                                   >  2:410514/1‑104 (MQ=255)

                                                                               tgcctgccTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATATACTTAATAAAATATAAATa                                                              >  1:3973219/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTAtt                                                                                         >  2:2621248/1‑112 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATaaa                                                                <  1:1435162/137‑1 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  2:493339/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:174757/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:1513070/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:275901/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:5052566/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:3659940/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAg                                                             >  1:3850788/1‑140 (MQ=255)

                                                                                gcctgcctGCAGCATGGTTGTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGAGGAGGAAAAAGTTATTCAGTATATACTTAATAAAATATAAATAg                                                             >  1:3758878/1‑140 (MQ=255)

                                                                                 cctgcctgCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATatc                                                            >  1:4543951/1‑138 (MQ=255)

                                                                                 cctgcctgCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGc                                                            >  1:4827433/1‑140 (MQ=255)

                                                                                 cctgcctgCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGc                                                            >  1:2983245/1‑140 (MQ=255)

                                                                                   tgcctgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATa                                                              >  2:2557952/1‑136 (MQ=255)

                                                                                     cctgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACg                                                                                                                             <  1:3371323/71‑1 (MQ=255)

                                                                                     cctgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGcacac                                                        >  2:1378376/1‑140 (MQ=255)

                                                                                     cctgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGcacac                                                        >  2:3836542/1‑140 (MQ=255)

                                                                                     cctgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGcacac                                                        <  2:2875010/140‑1 (MQ=255)

                                                                                       tgcAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCGAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACacaa                                                      <  1:5122900/140‑1 (MQ=255)

                                                                                        gcagcaTGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACacaac                                                     >  2:4886907/1‑140 (MQ=255)

                                                                                            caTGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATg                                                 >  2:355359/1‑140 (MQ=255)

                                                                                              tGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGaa                                               >  2:1784385/1‑140 (MQ=255)

                                                                                               ggTTCTATGAATTTTTTTACAAAATGCGGTCGAGTGTAACAAAAAaagaccgcatgaaacgagcggtcttttttattatcggaaatagctgatcaataatccgatcgagagcaggaatccgaaaaatgtatttgtttggg                                              <  1:3469275‑M1/140‑96 (MQ=255)

                                                                                                    tATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAagag                                         >  2:4803427/1‑140 (MQ=255)

                                                                                                    tATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGACAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATATCACACAACAATGAAAAagag                                         >  1:2667808/1‑140 (MQ=255)

                                                                                                      tGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCa                                       >  2:4654720/1‑140 (MQ=255)

                                                                                                      tGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCa                                       >  1:1412615/1‑140 (MQ=255)

                                                                                                        acgttttttACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGTCTTATTAACATATAAATAGCACACAACACTGAAAAAGAGCAtt                                     <  2:1104950/137‑1 (MQ=255)

                                                                                                                     aaTGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCaa                        >  2:3710338/1‑140 (MQ=255)

                                                                                                                            tCGAATGTAACAAAAAGAAAGCCAATAAAACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAAGACCACACAACACTGAAAAAGAGCATTGAACCAACTTCAATGCTCtt                 <  1:4603057/140‑1 (MQ=255)

                                                                                                                                  gTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCtt           <  2:538511/140‑1 (MQ=255)

                                                                                                                                         acagaaagCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCACCTTCAATGCTCTTTTTCTTAATCatt    <  2:303211/138‑1 (MQ=255)

                                                                                                                                         aaagaaagCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACAAAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCTTAATCatt    <  2:4620104/140‑1 (MQ=255)

                                                                                                                                         aaagaaagCAAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCTTAATCatt    <  2:2734883/140‑1 (MQ=255)

                                                                                                                                           agaaagCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCTTAATCattat  <  2:2101119/140‑1 (MQ=255)

TCGTCCATATGTGTTACAGATAAATCCATGTTCGTCATCTCCTTTAACGGATCTTTATCCGCTGTCCATGTACTAGACGTGCCTGCCTGCAGCATGGTTTTATGAACTTTTTTACAAAATGCGGTCGAATGTAACAAAAAGAAAGCCAATAATACGCTAACAGACTCTCTTTTCGATGAGGAAAAAGTTATTCAGTATAGACTTAATAAAATATAAATAGCACACAACAATGAAAAAGAGCATTGAACCAACTTCAATGCTCTTTTTCTTAATCATTAT  >  NZ_CP034943/3777056‑3777334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.