BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	2928129 =	209 (0.820)	3 (0.010)	3/242	NT	1.5%	intergenic (‑89/+51)	alaP/asnB	alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing)
*	?	NZ_CP034943	= 2928125	197 (0.800)	3 (0.010)	3/242	NT	1.5%	intergenic (‑85/+55)	alaP/asnB	alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing)
Rejected: Frequency below/above cutoff threshold.

Only 100 of 274 total aligned reads displayed.

TATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATAAA  >  NZ_CP034943/2927992‑2928266

tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat                                                                                                                                         >  1:2879272/1‑140 (MQ=255)

tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat                                                                                                                                         >  1:3354800/1‑140 (MQ=255)

tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat                                                                                                                                         >  2:4012056/1‑140 (MQ=255)

  tGCCTTTCTTAGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAAtaataa                                                                                                                                       <  1:3801330/140‑1 (MQ=255)

   tatgcctttcttcgagtccgcggtgcagctcttgtttttgtttttgcatgctttcttctcccctagaaaaaaatatcaataaatcatttttctgaattttccgtgtggatggggtaaatcaatgaggaggaagaaagaat                                                                                                                                      <  2:1547048‑M1/6‑5 (MQ=255)

   gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                      <  2:3520858/140‑1 (MQ=255)

   gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                      <  2:867289/140‑1 (MQ=255)

   gCCTTTCATCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                      <  2:937847/140‑1 (MQ=255)

        tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGTAATAATAAAAGGat                                                                                                                                 >  2:2656580/1‑140 (MQ=255)

        tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGat                                                                                                                                 <  2:1934395/140‑1 (MQ=255)

               gTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACa                                                                                                                          <  1:3078894/140‑1 (MQ=255)

                  cgcgGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAgg                                                                                                                       >  2:1270057/1‑140 (MQ=255)

                         cAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTGTcgg                                                                                                                >  1:2346031/1‑139 (MQ=255)

                         cAGCTCTTGTTTTTGTTTTTGCATGC‑TTCTTCTCCCCTAGAAAAAAATATCATTATATCATTTTTCTGAATATTCCGTACGGATTGGGTAAATCAATGATGATGGAGA‑‑‑AATAAAAGGATAACAACAAGGCTTTcgactac                                                                                                            >  1:837151/1‑137 (MQ=255)

                          aGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTcgac                                                                                                               <  2:2122186/140‑1 (MQ=255)

                          aGCTCTTGTTTTTGTTTTTGCATGCGTTCTTCTCCCCTAGAAAAAAATATCAATACATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAACGATAATAACAAGGCTTTcgac                                                                                                               <  1:785052/140‑1 (MQ=255)

                                 gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGACGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa                                                                                                        >  1:1117063/1‑140 (MQ=255)

                                 gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa                                                                                                        <  1:877274/140‑1 (MQ=255)

                                 gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa                                                                                                        >  1:3539512/1‑140 (MQ=255)

                                 gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAAAAAGTCTTTAGACGAATAGa                                                                                                        >  2:4029217/1‑140 (MQ=255)

                                    tttgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAg                                                                                                     >  2:4170523/1‑140 (MQ=255)

                                      tgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGcc                                                                                                   <  2:4103376/140‑1 (MQ=255)

                                      tgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGcc                                                                                                   >  2:3289740/1‑140 (MQ=255)

                                         ttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttg                                                                                                <  1:3192923/140‑1 (MQ=255)

                                           ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                              <  1:3960916/140‑1 (MQ=255)

                                           ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                              <  1:3118827/140‑1 (MQ=255)

                                           ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                              <  1:1170746/140‑1 (MQ=255)

                                           ttgCACGCTTTCTTCTCCCCTAGAAAAAAATATCACTAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                              <  1:2842122/140‑1 (MQ=255)

                                             gCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTtgttgt                                                                                            <  1:481177/140‑1 (MQ=255)

                                                     tcttctCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                    <  2:3595406/140‑1 (MQ=255)

                                                     tcttctCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                    <  1:1232628/140‑1 (MQ=255)

                                                     tcgtctcCCCGAGAAAAAAATATCAATAAATGATTTTTCTGAATGTTCCGTGTGGATTGGGTAAATCAATGATGATGACGAAATAATAAAAGGATAAGAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                    <  2:3190076/137‑1 (MQ=255)

                                                        tctcCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACaa                                                                                 >  1:3601826/1‑140 (MQ=255)

                                                         ctcCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACaaa                                                                                <  2:2212116/140‑1 (MQ=255)

                                                          tcCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAg                                                                               <  2:1596433/140‑1 (MQ=255)

                                                            cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATCAAAGGCTAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                             >  1:2204231/1‑140 (MQ=255)

                                                            cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                             >  2:969069/1‑140 (MQ=255)

                                                            cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                             >  1:2008170/1‑140 (MQ=255)

                                                              cTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGa                                                                           <  1:563490/140‑1 (MQ=255)

                                                               tAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGACTTGTTCTCTGTTACACAAAGATGaa                                                                          >  1:2473028/1‑139 (MQ=255)

                                                               ccctagaaaaaaatatcattatatcatttttctgaatattccgtacggattgggtaaatcaatgatgatggagaAATAAAAGGATAACAACAAGGCTTTCGACTACTCGAAAGCCTTGTTGTCTGTTACACAAAGATGAc                                                                          <  1:1698171‑M1/66‑1 (MQ=255)

                                                                aGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGAct                                                                         <  2:2879272/140‑1 (MQ=255)

                                                                 gAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGATACACAAAGATGActt                                                                        >  1:2366582/1‑140 (MQ=255)

                                                                 gAAAAAAATATAAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAAAAAGGCTTTAGAAGAATCGAAAGCCATTTTGTCTGTTACACAAAGATGActt                                                                        >  2:2759760/1‑140 (MQ=255)

                                                                      aaaTATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTATTTc                                                                   >  1:2042214/1‑140 (MQ=255)

                                                                           tCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCtg                                                              <  1:1457493/140‑1 (MQ=255)

                                                                            cAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCtga                                                             <  1:994267/140‑1 (MQ=255)

                                                                            cAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCtga                                                             <  1:198164/140‑1 (MQ=255)

                                                                                aaaTCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGAc                                                         <  1:3672970/140‑1 (MQ=255)

                                                                                  aTCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTc                                                       <  2:1037267/140‑1 (MQ=255)

                                                                                    cATTTTTCTTAATTTTCGGTGTGGTTTGGGGAAATCTATGATGATGAATTAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCGTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  1:4160637/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  1:1862720/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  2:496378/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  2:3748587/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  2:1123585/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  2:1710502/140‑1 (MQ=255)

                                                                                    cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                     <  2:3539512/140‑1 (MQ=255)

                                                                                         ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATTACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                                <  2:348348/140‑1 (MQ=255)

                                                                                         ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                                <  1:671765/140‑1 (MQ=255)

                                                                                         ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCGTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                                <  2:1332690/140‑1 (MQ=255)

                                                                                              aaTTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTc                                                       >  1:100947/1‑128 (MQ=255)

                                                                                                            tttGTGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                             <  2:3113252/139‑1 (MQ=255)

                                                                                                            aTTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                             <  2:2690290/140‑1 (MQ=255)

                                                                                                            aTTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                             <  1:2607866/140‑1 (MQ=255)

                                                                                                            aTTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                             <  1:407352/140‑1 (MQ=255)

                                                                                                            aTTGGGTAAATAAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGAATATACCGTTTTTc                             <  1:3486513/140‑1 (MQ=255)

                                                                                                                     aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                    >  1:2529028/1‑140 (MQ=255)

                                                                                                                     aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                    >  1:1268129/1‑140 (MQ=255)

                                                                                                                     aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                    >  1:148995/1‑140 (MQ=255)

                                                                                                                     aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                    >  1:1481511/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAACGCCTTGTTGTCTGTTACACCAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATCTTAATGCtgt               >  2:738564/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt               >  1:1836793/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt               >  1:257839/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt               >  1:3043159/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt               >  1:300775/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt               >  1:3226275/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATAGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTAGATATTAATGAtgt               >  2:283078/1‑140 (MQ=255)

                                                                                                                          tgatgatgaAGAAATAATAAAAGGAGAATAACAACGCTTTCGACGAATCGAAAGACTTGTTGTCTGTTACAGAAAGTTGCCTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTGTCTATATTAAGGCtgt               >  2:2919430/1‑140 (MQ=255)

                                                                                                                           gatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTTTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgtg              <  2:3354800/140‑1 (MQ=255)

                                                                                                                              gatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCa           >  2:104805/1‑140 (MQ=255)

                                                                                                                              gatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCa           <  1:4133820/140‑1 (MQ=255)

                                                                                                                              gatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTATTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCa           <  2:2042214/140‑1 (MQ=255)

                                                                                                                               atgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAg          >  2:1707424/1‑140 (MQ=255)

                                                                                                                               atgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAg          >  2:1811464/1‑140 (MQ=255)

                                                                                                                                tgaAGAAATAATAAAATGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCCGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGa         <  1:2708678/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAATGATTATAACTAGGCTTTCGACGTATCGAAAGCCTTGTTGTATGTTAAACAAAGATGACTTCTTTCGTCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTAGATATTAATGCTGTGCCAGATCATa    <  1:1749207/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGTATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:1917399/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACCAGTCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTAAACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  2:2473028/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:617460/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  2:3621635/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  2:3161168/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  2:3026693/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  2:1508943/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:631881/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:2273203/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:2142699/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:1707424/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:1572085/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:1341099/140‑1 (MQ=255)

                                                                                                                                     aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa    <  1:104805/140‑1 (MQ=255)

TATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATAAA  >  NZ_CP034943/2927992‑2928266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.