BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	2928129 =	209 (0.820)	3 (0.010)	3/242	NT	1.5%	intergenic (‑89/+51)	alaP/asnB	alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing)
*	?	NZ_CP034943	= 2928125	197 (0.800)	3 (0.010)	3/242	NT	1.5%	intergenic (‑85/+55)	alaP/asnB	alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing)
Rejected: Frequency below/above cutoff threshold.

Only 100 of 270 total aligned reads displayed.

AAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATA  >  NZ_CP034943/2927986‑2928264

     atatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataa                                                                                                                                        <  2:1518400‑M2/140‑6 (MQ=255)

      tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat                                                                                                                                       >  2:4012056/1‑140 (MQ=255)

      tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat                                                                                                                                       >  1:2879272/1‑140 (MQ=255)

      tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATGGGGTAAATCAATGAGGAGGAAGAaagaat                                                                                                                                       <  2:1547048‑M2/140‑7 (MQ=255)

         gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                    <  1:3717782/140‑1 (MQ=255)

         gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                    <  2:2149091/140‑1 (MQ=255)

         gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                    <  2:867289/140‑1 (MQ=255)

         gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGATTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                    <  2:1715772/140‑1 (MQ=255)

         gCCTTTCATCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa                                                                                                                                    <  2:937847/140‑1 (MQ=255)

              tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGTAATAATAAAAGGat                                                                                                                               >  2:2656580/1‑140 (MQ=255)

              tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAGAtaataa                                                                                                                                     >  2:4125166/1‑134 (MQ=255)

              tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGat                                                                                                                               <  1:852962/140‑1 (MQ=255)

              tcttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGat                                                                                                                               <  2:1709186/140‑1 (MQ=255)

                          cgGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCt                                                                                                                   >  1:49136/1‑140 (MQ=255)

                               cAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTGTcgg                                                                                                              >  1:2346031/1‑139 (MQ=255)

                                aGCTCTTGTTTTTGTTTTTGCATGCGTTCTTCTCCCCTAGAAAAAAATATCAATACATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAACGATAATAACAAGGCTTTcgac                                                                                                             <  1:785052/140‑1 (MQ=255)

                                     ttgtttttgtttTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTcgacctgtc                                                                                                        <  1:4012056/140‑6 (MQ=255)

                                       gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGACGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa                                                                                                      >  1:1117063/1‑140 (MQ=255)

                                       gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa                                                                                                      >  1:4100946/1‑140 (MQ=255)

                                       gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAAAAAGTCTTTAGACGAATAGa                                                                                                      >  2:4029217/1‑140 (MQ=255)

                                         ttttgtttttgCATGCTTTCTACTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGaaa                                                                                                    <  2:3837367/140‑1 (MQ=255)

                                          tttgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAg                                                                                                   >  2:4170523/1‑140 (MQ=255)

                                            tgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGcc                                                                                                 >  2:3289740/1‑140 (MQ=255)

                                            tgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGcc                                                                                                 >  1:4265942/1‑140 (MQ=255)

                                            tgtttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATAATTTTTATGAATTTTCCGTGTGGATTTGGTAAATCAATGATGATGAATAAATAATAAAAGGATAATAACAAGGCTTTCGACTAATCGAAAgaa                                                                                                 >  1:3216982/1‑138 (MQ=255)

                                               ttttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttg                                                                                              <  1:3192923/140‑1 (MQ=255)

                                                 ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                            <  1:1170746/140‑1 (MQ=255)

                                                 ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                            <  1:3118827/140‑1 (MQ=255)

                                                 ttgCACGCTTTCTTCTCCCCTAGAAAAAAATATCACTAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt                                                                                            <  1:2842122/140‑1 (MQ=255)

                                                  tgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgttg                                                                                           >  2:2273203/1‑140 (MQ=255)

                                                   gCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTtgttgt                                                                                          <  1:344520/140‑1 (MQ=255)

                                                      tGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTg                                                                                       <  2:1889976/140‑1 (MQ=255)

                                                      tGCTTTCTTCTCCCCTACAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTg                                                                                       <  2:2768997/140‑1 (MQ=255)

                                                           tcttctCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                  <  2:3595406/140‑1 (MQ=255)

                                                           tcttctCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                  <  1:1232628/140‑1 (MQ=255)

                                                           tcgtctcCCCGAGAAAAAAATATCAATAAATGATTTTTCTGAATGTTCCGTGTGGATTGGGTAAATCAATGATGATGACGAAATAATAAAAGGATAAGAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTaca                                                                                  <  2:3190076/137‑1 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGACATAATAAACGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTCCACAAAGAt                                                                           >  2:2702243/1‑140 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATCAAAGGCTAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                           >  1:2204231/1‑140 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                           >  2:2884491/1‑140 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                           >  2:969069/1‑140 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                           >  2:2067828/1‑140 (MQ=255)

                                                                  cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt                                                                           >  1:2008170/1‑140 (MQ=255)

                                                                    cTAGAAAAAAATATCAATAAATCATTTTTATGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGa                                                                         <  1:1637905/140‑1 (MQ=255)

                                                                     tAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGACTTGTTCTCTGTTACACAAAGATGaa                                                                        >  1:2473028/1‑139 (MQ=255)

                                                                       gAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGATACACAAAGATGActt                                                                      >  1:2366582/1‑140 (MQ=255)

                                                                            aaaTATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTATTTc                                                                 >  1:2042214/1‑140 (MQ=255)

                                                                                  cAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCtga                                                           <  1:994267/140‑1 (MQ=255)

                                                                                        aTCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTc                                                     <  2:1037267/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                   <  2:3343946/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                   <  1:3812916/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                   <  2:3083506/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                   <  2:496378/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg                                                   <  2:3539512/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGGTACACAAAGAGGACTTCTTTCGGCTGATGACTCAg                                                   <  2:314182/140‑1 (MQ=255)

                                                                                          cATTTTTCTGAATTGTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGCTGAATTCTTTCGGCGGATGACTCAg                                                   <  1:71083/140‑1 (MQ=255)

                                                                                               ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATTACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                              <  2:348348/140‑1 (MQ=255)

                                                                                               ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACCAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                              <  2:195363/140‑1 (MQ=255)

                                                                                               ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCGTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt                                              <  2:1332690/140‑1 (MQ=255)

                                                                                                    aaTTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTc                                                     >  1:100947/1‑128 (MQ=255)

                                                                                                       tttCCGTGTGGATTGGTTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCata                                      <  1:1410672/140‑1 (MQ=255)

                                                                                                                 gATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGttttt                            <  2:1085646/140‑1 (MQ=255)

                                                                                                                  aTTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                           <  2:1129367/140‑1 (MQ=255)

                                                                                                                  aTTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTc                           <  1:2607866/140‑1 (MQ=255)

                                                                                                                           aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                  >  1:1268129/1‑140 (MQ=255)

                                                                                                                           aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                  >  1:1481511/1‑140 (MQ=255)

                                                                                                                           aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                  >  1:148995/1‑140 (MQ=255)

                                                                                                                           aTCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                  >  1:2529028/1‑140 (MQ=255)

                                                                                                                           aTCAATGATGATGAAGAAACAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAAt                  >  1:3265986/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAACGCCTTGTTGTCTGTTACACCAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATCTTAATGCtgt             >  2:738564/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt             >  1:300775/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt             >  1:3043159/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt             >  1:634699/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgt             >  1:257839/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGGTTTTCGATATTAATGCtgt             >  2:1627414/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCGTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTGTTCGATATTAATGCtgt             >  2:3002412/1‑140 (MQ=255)

                                                                                                                                tgatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATAGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTAGATATTAATGAtgt             >  2:283078/1‑140 (MQ=255)

                                                                                                                                 gatgatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCtgtg            <  2:117588/140‑1 (MQ=255)

                                                                                                                                    gatgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCa         <  1:4133820/140‑1 (MQ=255)

                                                                                                                                     atgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAg        >  1:3535743/1‑140 (MQ=255)

                                                                                                                                      tgaAGAAATAATAAAATGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCCGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGa       <  1:2708678/140‑1 (MQ=255)

                                                                                                                                      tgaAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGa       <  2:3535743/140‑1 (MQ=255)

                                                                                                                                        aagaaATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATc     >  1:3621635/1‑140 (MQ=255)

                                                                                                                                           aaaTAATAAAATGATTATAACTAGGCTTTCGACGTATCGAAAGCCTTGTTGTATGTTAAACAAAGATGACTTCTTTCGTCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTAGATATTAATGCTGTGCCAGATCATa  <  1:1749207/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGTATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1917399/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:603776/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  2:3621750/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  2:2501540/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:888637/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:617460/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:35553/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:3072991/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:2273203/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1938991/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1855260/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:183559/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1707424/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1572085/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:1341099/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:104805/140‑1 (MQ=255)

                                                                                                                                           aaaTAATAAAAGGATAAGAACCAGGCTTTCGACGAATCGAAAGCCTAGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATa  <  1:2146410/140‑1 (MQ=255)

AAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCATATACCGTTTTTCGATATTAATGCTGTGCCAGATCATA  >  NZ_CP034943/2927986‑2928264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.