New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 3592725 =198 (0.770)7 (0.030) 4/232 NT 3.7% coding (424/702 nt) urtE urea ABC transporter ATP‑binding subunit UrtE
?NZ_CP034943 = 3592721 185 (0.780)coding (428/702 nt) urtE urea ABC transporter ATP‑binding subunit UrtE
Rejected: Frequency below/above cutoff threshold.

Only 100 of 221 total aligned reads displayed.

AACAACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCA  >  NZ_CP034943/3592582‑3592856
                                                                                                                                           |                                                                                                                                       
aacaacGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTa                                                                                                                                         <  1:3001604/140‑1 (MQ=255)
aacaacGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTa                                                                                                                                         <  1:2558732/140‑1 (MQ=255)
    acGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctg                                                                                                                                     <  2:3630327‑M2/140‑5 (MQ=255)
    acGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctg                                                                                                                                     <  2:2596091‑M2/140‑5 (MQ=255)
     cGGACATGTCTCTTTGTCAGGAAATAACTACGATAACTTGGCTGATAAGTTCGATAATTGACGTCGGAATTCCTTCCATTGGTTCATCAAGTCACATAATTTTCGGATTTCCCATCAGCGCTCTGGCACTTGCTAgctgc                                                                                                                                    <  2:1119862‑M2/140‑6 (MQ=255)
     cGGAACTGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                    >  1:2375097‑M2/1‑135 (MQ=255)
     cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                    <  2:3430849‑M2/140‑6 (MQ=255)
     cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                    <  2:219667‑M2/140‑6 (MQ=255)
     cGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgc                                                                                                                                    <  1:159839‑M2/140‑6 (MQ=255)
           tGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctgc                                                                                                                              >  1:3315020/1‑140 (MQ=255)
             tctcTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTTACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgatgctgctg                                                                                                                            >  1:4042253/1‑140 (MQ=255)
             tctcTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                            >  1:1524260/1‑140 (MQ=255)
             tctcTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                            <  1:3633886/140‑1 (MQ=255)
             tctcTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                            >  2:403137/1‑140 (MQ=255)
             tctcTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGctgctgctgctg                                                                                                                            >  2:3393483/1‑140 (MQ=255)
                 tttttCGGGACATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGCCt                                                                                                                        <  2:1139563/140‑1 (MQ=255)
                    ttCTTGATATTTCTACGATAACTTGACTGATTAGTTCGATAATTGACGGCTGACTTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCg                                                                                                                     <  1:4115295/140‑1 (MQ=255)
                         gAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTTTCTTTTTCTATATGATTTTGCTGGCCTCAGGTTaa                                                                                                                <  2:616082/140‑1 (MQ=255)
                         gAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatc                                                                                                                <  2:3090058‑M2/140‑26 (MQ=255)
                              ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                           <  1:3416366/140‑1 (MQ=255)
                              ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                           <  1:2901682/140‑1 (MQ=255)
                                      tAACTTTTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTAATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTTCTAGCTGCTGATGCTTGCCTCCTCTTAAATCGCCGCCtttt                                                                                                   <  2:2152232/140‑2 (MQ=255)
                                      tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                   <  2:2821154/140‑1 (MQ=255)
                                          ttGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGt                                                                                               <  2:159839/140‑1 (MQ=255)
                                          ttGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGt                                                                                               <  2:321028/140‑1 (MQ=255)
                                          ttGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGt                                                                                               <  2:582817/140‑1 (MQ=255)
                                                  ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                       <  1:3789355/140‑1 (MQ=255)
                                                    aGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtctc                                                                                     >  1:4109238/1‑140 (MQ=255)
                                                    aGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtctc                                                                                     >  1:3676052/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  1:308684/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  2:3158174/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  1:3950732/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  2:845960/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  2:2343087/1‑140 (MQ=255)
                                                      ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTACTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                   >  1:2278296/1‑140 (MQ=255)
                                                         gATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTa                                                                                <  2:1655276/140‑1 (MQ=255)
                                                           tAATTGACGGCTGACTTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCCGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                              >  1:499412/1‑140 (MQ=255)
                                                           tAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaaa                                                                              >  2:1985168/1‑140 (MQ=255)
                                                            aaTTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGATTAACTCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAg                                                                             <  1:1791560/140‑1 (MQ=255)
                                                                gACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAgg                                                                         >  1:580953/1‑140 (MQ=255)
                                                                gACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAgg                                                                         >  1:586291/1‑140 (MQ=255)
                                                                 aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                        <  2:316442/140‑1 (MQ=255)
                                                                 aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                        <  2:1013062/140‑1 (MQ=255)
                                                                 aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                        <  2:3262287/140‑1 (MQ=255)
                                                                 aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                        <  2:921767/140‑1 (MQ=255)
                                                                 aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                        <  2:4170612/140‑1 (MQ=255)
                                                                   ggCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGaaa                                                                      <  1:1062348/140‑1 (MQ=255)
                                                                            ccttccATTGGTTCATCAAGTAAAATAATTTTCGGATGTCCCAACAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGaaa                                                             <  2:830172/140‑1 (MQ=255)
                                                                              gtccaTTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatctcttttaaagcaggaaaccactgaaaaatgt                                                           >  2:1685584‑M2/2‑62 (MQ=255)
                                                                                ccATTGGTTCATCAATTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                         <  1:3839114/140‑1 (MQ=255)
                                                                                ccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                         <  1:3388899/140‑1 (MQ=255)
                                                                                ccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                         <  1:3298110/140‑1 (MQ=255)
                                                                                 cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        <  2:1898585/140‑1 (MQ=255)
                                                                                 cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        <  2:4117976/140‑1 (MQ=255)
                                                                                 cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        <  2:4109238/140‑1 (MQ=255)
                                                                                 cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        <  2:3979004/140‑1 (MQ=255)
                                                                                    tGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCtt                                                     >  2:1355944/1‑140 (MQ=255)
                                                                                       ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                  >  2:1522294/1‑140 (MQ=255)
                                                                                       ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                  >  2:362434/1‑140 (MQ=255)
                                                                                        tcatcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatctcttttaaagcaggaaaccactgaaaaatgtcttccttgac                                                 >  2:1630607‑M2/1‑52 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  1:1204600/140‑1 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  2:483031/140‑1 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  2:2864726/140‑1 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  1:1468937/140‑1 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  2:436430/140‑1 (MQ=255)
                                                                                           tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  2:1300204/140‑1 (MQ=255)
                                                                                           tcaACTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                              <  1:310254/140‑1 (MQ=255)
                                                                                            caAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAcc                                             <  1:126749/140‑1 (MQ=255)
                                                                                                tataataatTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCACGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                         <  1:2185843/137‑1 (MQ=255)
                                                                                                 aaaaTAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTcccc                                        >  2:2983223/1‑140 (MQ=255)
                                                                                                        ttttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATtctc                                 >  2:2064805/1‑140 (MQ=255)
                                                                                                         tttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATtctct                                >  1:252147/1‑140 (MQ=255)
                                                                                                            cGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCct                             <  2:2325224/140‑1 (MQ=255)
                                                                                                            cGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCct                             >  2:3321605/1‑140 (MQ=255)
                                                                                                            cGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCct                             >  2:2751902/1‑140 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTTCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGAATCTCTTTTAAAGCAGGAAACCAGTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  1:2216492/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAACCCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  1:1131453/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAATTGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  1:2772316/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  2:3410638/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  1:1888539/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  1:3573951/140‑1 (MQ=255)
                                                                                                                      aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                   <  2:128530/140‑1 (MQ=255)
                                                                                                                         aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                <  2:866352/140‑1 (MQ=255)
                                                                                                                         aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                <  2:42681/140‑1 (MQ=255)
                                                                                                                         aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                >  1:3685990/1‑140 (MQ=255)
                                                                                                                         aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                <  2:107541/140‑1 (MQ=255)
                                                                                                                         aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                <  2:133545/140‑1 (MQ=255)
                                                                                                                           cgcTCTGGGAATTGCTATCTTCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct              <  2:3553340/140‑1 (MQ=255)
                                                                                                                           cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct              >  2:3836504/1‑140 (MQ=255)
                                                                                                                           cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct              <  1:929501/140‑1 (MQ=255)
                                                                                                                           cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct              <  1:696072/140‑1 (MQ=255)
                                                                                                                           cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct              <  2:3685990/140‑1 (MQ=255)
                                                                                                                             ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGACGCGGctct            >  1:2081229/1‑140 (MQ=255)
                                                                                                                             ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct            >  1:1992222/1‑140 (MQ=255)
                                                                                                                             ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct            >  1:758578/1‑140 (MQ=255)
                                                                                                                             ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGctct            >  1:2643035/1‑140 (MQ=255)
                                                                                                                                  gCAATTGCTCGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTGTGCGGTCAAGCATCTCTTTGAAAGCAGGAAACCACTGAAAAAGGTCTTCCTTGCCCGCCCCCCTTCTCTCCTTCTTCGGAAGCGGCTCTTCTcc       <  2:2636399/140‑1 (MQ=255)
                                                                                                                                   cAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCACCATTCTCTCCTTCTTCGGAAGAGGCTCTTCTCCa      >  2:1408789/1‑140 (MQ=255)
                                                                                                                                       tGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        >  1:1294555/1‑86 (MQ=255)
                                                                                                                                       tGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                        <  2:1906615/86‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                       
AACAACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCA  >  NZ_CP034943/3592582‑3592856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.