New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 80462	186 (0.800)	3 (0.010)	3/252	NT	1.6%	intergenic (+18/‑32)	hslO/EO946_RS00430	redox‑regulated molecular chaperone HslO/peptidyl‑prolyl cis‑trans isomerase
	?	NZ_CP034943	80466 =	181 (0.780)					intergenic (+22/‑28)	hslO/EO946_RS00430	redox‑regulated molecular chaperone HslO/peptidyl‑prolyl cis‑trans isomerase
Rejected: Frequency below/above cutoff threshold.

CAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/80401‑80462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCA  >  NZ_CP034943/80466‑80589                                                                                                                                                                                            CAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTAATTTGAGAAAAGGGGCTGAAAGCAGGATTGAAATCAAGAACAATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTG                                                <  1:3132241/140‑1                    GCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTAATTTGAGAAAAGGGGCTGAAAGCAGGTTTGAAATCAAGAACAATCTGGACCATTATTTTATGGGCGCTGTTGGTTTGCTGTATTGCTGTTGCATAT                             >  1:250506/1‑140                                               TCTTTAGCGGGTTTTTAATTTGAGAAAAGGGGCTGAAAGCAGGTTTGAAATCAAGAACAATCTGGACCATTATTTTATGGGCGCTGTTGGTTTGCTGTATTGCTGTTGCATATACGCTGACGAAATCCCAAGCCGGCGCA  <  2:250506/140‑1                                                                                                                                                                                            CAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/80401‑80462 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCA  >  NZ_CP034943/80466‑80589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.