New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 80462186 (0.800)3 (0.010) 3/252 NT 1.6% intergenic (+18/‑32) hslO/EO946_RS00430 redox‑regulated molecular chaperone HslO/peptidyl‑prolyl cis‑trans isomerase
?NZ_CP034943 80466 = 181 (0.780)intergenic (+22/‑28) hslO/EO946_RS00430 redox‑regulated molecular chaperone HslO/peptidyl‑prolyl cis‑trans isomerase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 209 total aligned reads displayed.

TACAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGTGAGT  >  NZ_CP034943/80329‑80605
                                                                                                                                         |                                                                                                                                           
tACAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAAt                                                                                                                                           <  1:2807709/140‑1 (MQ=255)
tACAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAAt                                                                                                                                           <  1:686400/140‑1 (MQ=255)
        atGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGaaa                                                                                                                                   <  1:2703269/140‑1 (MQ=255)
        atGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGaaa                                                                                                                                   <  1:2062357/140‑1 (MQ=255)
               aagaagaTGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCt                                                                                                                            >  1:2218324/1‑140 (MQ=255)
                    caTGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTAAAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGaaaa                                                                                                                       <  2:1676817/139‑1 (MQ=255)
                         aCAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGAt                                                                                                                  >  1:1164870/1‑140 (MQ=255)
                         aCAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGAt                                                                                                                  >  1:3600175/1‑140 (MQ=255)
                            aGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTg                                                                                                               <  2:905336/140‑1 (MQ=255)
                            aGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTg                                                                                                               <  2:3524480/140‑1 (MQ=255)
                            aGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTg                                                                                                               <  1:1214746/140‑1 (MQ=255)
                             gCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGa                                                                                                              >  1:488124/1‑140 (MQ=255)
                             gCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGa                                                                                                              >  1:1790182/1‑140 (MQ=255)
                                 caGCAGTATGCCATTATTGTAAAGAAAAGTACTTATTTACAACAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATc                                                                                                          <  1:1399176/139‑1 (MQ=255)
                                 caGCAGGATGCCATTGTTGTAAAGAAAATTACTTATTTACAAAAGAAGAGCTGGAATGTCTTCGTTACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATc                                                                                                          <  2:3100940/139‑1 (MQ=255)
                                  aGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAAt                                                                                                                                           <  1:1505386/106‑1 (MQ=255)
                                  aGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCa                                                                                                         >  2:621511/1‑140 (MQ=255)
                                   gCAGTATGCAAGTTTTTTAATGAATAGTACTTATGTACAAAAGAAGAGCTGGAAGGGCTGCGTGACCAAACTACCCTCTAAGCTCGTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGGTGAAAACAGATTTGAAATCaa                                                                                                        <  2:3574604/140‑1 (MQ=255)
                                      ggaTGCCATTTTTGTACTGAACAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  1:1441719/138‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  1:582550/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  2:487618/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  2:2082158/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  1:1373889/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  2:2699713/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  2:2756370/140‑1 (MQ=255)
                                      gTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGATCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGaa                                                                                                     <  1:3725557/140‑1 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGGTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGTATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAAc                                                                                                    >  1:779069/1‑140 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCt                                                                                                                            >  2:1405408/1‑116 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAAc                                                                                                    >  1:3411424/1‑140 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAAc                                                                                                    >  1:1118987/1‑140 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAAc                                                                                                    >  1:1042215/1‑140 (MQ=255)
                                       tATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCGTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAAc                                                                                                    >  1:1590639/1‑140 (MQ=255)
                                         tGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTTAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTa                                                                                                  >  2:3455971/1‑140 (MQ=255)
                                             aTTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTg                                                                                              <  2:1654847/140‑1 (MQ=255)
                                              tttttGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTgg                                                                                             <  2:1453549/140‑1 (MQ=255)
                                               ttttGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTTGAAGTGCTTAGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGa                                                                                            >  1:1612270/1‑140 (MQ=255)
                                               ttttGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGa                                                                                            >  1:933383/1‑140 (MQ=255)
                                                tttGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGAc                                                                                           <  2:1164870/140‑1 (MQ=255)
                                                  tGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCa                                                                                         <  1:1754699/140‑1 (MQ=255)
                                                  tGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCa                                                                                         <  2:1154390/140‑1 (MQ=255)
                                                   gTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCat                                                                                        <  1:1554422/140‑1 (MQ=255)
                                                            aGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAgg                                                                               <  2:2843837/140‑1 (MQ=255)
                                                              tACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAgggg                                                                             <  1:865514/140‑1 (MQ=255)
                                                              tACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAgggg                                                                             <  2:1042215/140‑1 (MQ=255)
                                                                   aTTTACAAAATAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATAAAGAAATATCTGGACCATTATTTTATGGGCGCTg                                                                        >  1:2215966/1‑140 (MQ=255)
                                                                   aTTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTg                                                                        >  1:3635559/1‑140 (MQ=255)
                                                                      tACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTg                                                                     <  1:1474198/140‑1 (MQ=255)
                                                                      tACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTg                                                                     <  1:2155204/140‑1 (MQ=255)
                                                                        cAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGt                                                                   >  1:1640140/1‑140 (MQ=255)
                                                                        cAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGt                                                                   >  2:521918/1‑140 (MQ=255)
                                                                        cAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGt                                                                   >  2:1320935/1‑140 (MQ=255)
                                                                           aagaagAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTg                                                                >  2:3348032/1‑140 (MQ=255)
                                                                           aagaacACCTGGAAGGGCTTCGTGACCAAACTACCCGCTAACCTCATTAGCGGGTTATTTTGAATTTGAGAAAAGGGGCTGAAAACAGATATGAAATCAAGAACTATCTGGACCCTTATTTTAGGGGCGCTGTTGGTTTg                                                                <  1:3407155/140‑1 (MQ=255)
                                                                              aagaGCTGGAAGGGCTTCGTGACCAAACGACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTg                                                             <  2:1010828/140‑1 (MQ=255)
                                                                                   cTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTAttt                                                        <  2:2309918/140‑1 (MQ=255)
                                                                                   cTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTAttt                                                        <  2:2556259/140‑1 (MQ=255)
                                                                                   cTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTAttt                                                        <  2:129535/140‑1 (MQ=255)
                                                                                   cTGGAAGGGCTTCGTGACCAAACTACCCGATAAGCTATTTAGCGTTTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTAttt                                                        <  2:81197/140‑1 (MQ=255)
                                                                                      gAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGTGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACGATTATTTTAGTGTCTCTGTTGGTTTGCTGTATTTCCg                                                     >  1:2292849/1‑140 (MQ=255)
                                                                                      gAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCg                                                     >  2:2601826/1‑140 (MQ=255)
                                                                                      gAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGG‑TTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  2:2320905/140‑1 (MQ=255)
                                                                                       caGGGCTTCGTGACCAACCTACCCGCTAAGCTCTTTAGCGGGATTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGTACTATCTGGACCATTATTGTAGGGGCGCTGTTGGTTTGCTGTATTTCCgg                                                    <  2:2922537/139‑2 (MQ=255)
                                                                                       aaGGGCTTGGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  2:3675728/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  2:1517926/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  1:2121407/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  1:1681309/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  1:289379/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  1:260474/140‑1 (MQ=255)
                                                                                       aaGGGCTTCGTGACCAAACGACCCGCTAAGCTCTTTCGCGGGTTTTTTTGAATGTGAGACAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGt                                                    <  2:2009683/140‑1 (MQ=255)
                                                                                        aGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGtt                                                   >  2:473660/1‑140 (MQ=255)
                                                                                           gCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCa                                                >  2:1484630/1‑140 (MQ=255)
                                                                                             ttCGTGACCAAACAACCCGCTAAGCTCTTTAGCGCGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCata                                              >  2:2154575/1‑140 (MQ=255)
                                                                                              gcttcgtgaccaaactacccgctaagctctttagcgggtttttAATTTGAGAAAAGGGGCTGAAAGCAGGTTTGAAATCAAGAACAATCTGGACCATTATTTTATGGGCGCTGTTGGTTTGCTGTATTGCTGTTGCatat                                             >  1:250506‑M2/44‑140 (MQ=255)
                                                                                                   aCCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCt                                        <  2:1793013/140‑1 (MQ=255)
                                                                                                   aCCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTATTGAATTTGAGAAAAGGGGCTGAAAACAGATGTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCt                                        <  2:267528/140‑1 (MQ=255)
                                                                                                       aaCTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACg                                    >  1:1870066/1‑140 (MQ=255)
                                                                                                       aaCTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACg                                    >  1:1767992/1‑140 (MQ=255)
                                                                                                       aaCTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGAGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACg                                    >  1:2013163/1‑140 (MQ=255)
                                                                                                            cccGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATc                               >  1:1890965/1‑140 (MQ=255)
                                                                                                            cccGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATc                               >  2:1702318/1‑140 (MQ=255)
                                                                                                            cccGCTAAGCTCTTTAGCGGGTTTTTGTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGCCCATTCTTTTAGGGGCGGTGTTGGTTTGCTGTATTTCGGTTGCATATACGCTGACGACATc                               >  2:2486496/1‑140 (MQ=255)
                                                                                                                 tAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAg                          >  2:787065/1‑140 (MQ=255)
                                                                                                                 tAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAg                          >  2:1195880/1‑140 (MQ=255)
                                                                                                                 tAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAg                          >  2:677069/1‑140 (MQ=255)
                                                                                                                 tAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTGGCATATACGCTGACGAAATCCCAAg                          >  2:2053782/1‑140 (MQ=255)
                                                                                                                 tAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCAGTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATCTACGCTGACGAAATCCCacg                          >  2:194028/1‑138 (MQ=255)
                                                                                                                  aaGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGc                         <  1:3342430/140‑1 (MQ=255)
                                                                                                                      tctTTAGCGGGTTTTTTTGACTTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTTTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCACgc                     <  2:690627/140‑1 (MQ=255)
                                                                                                                        tttAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATTCGCTGACGAACTCCCAAGCAGgcgc                   >  2:3199757/1‑140 (MQ=255)
                                                                                                                         tctttagcgggtttttAATTTGAGAAAAGGGGCTGAAAGCAGGTTTGAAATCAAGAACAATCTGGACCATTATTTTATGGGCGCTGTTGGTTTGCTGTATTGCTGTTGCATATACGCTGACGAAATCCCAAGCCGGCGCa                  <  2:250506‑M2/124‑1 (MQ=255)
                                                                                                                          tAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCAt                 >  1:1986140/1‑140 (MQ=255)
                                                                                                                                    ttttGAATTTGAGAAATGGGGCTGAAAACAGAGTTGACCTCACGAACTATCTGGCCCATTATTTTAGGCGCGCGGTTCGTTTGCTGTATTTCCGTTGCATAGACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCgg       <  2:1818714/140‑1 (MQ=255)
                                                                                                                                     tttGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGt      <  1:3115968/140‑1 (MQ=255)
                                                                                                                                     tttGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGt      <  1:1303625/140‑1 (MQ=255)
                                                                                                                                     tttGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGt      <  1:621511/140‑1 (MQ=255)
                                                                                                                                     tttGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGt      <  2:1335813/140‑1 (MQ=255)
                                                                                                                                     tttGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGt      <  2:1640140/140‑1 (MQ=255)
                                                                                                                                       tGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGTGa    <  2:2013163/140‑1 (MQ=255)
                                                                                                                                       tGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGTGa    <  2:89204/140‑1 (MQ=255)
                                                                                                                                       tGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGTGa    <  2:1870066/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
TACAAGATATGATAGAAGAAGATGGACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACAAAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAAGCTCTTTAGCGGGTTTTTTTGAATTTGAGAAAAGGGGCTGAAAACAGATTTGAAATCAAGAACTATCTGGACCATTATTTTAGGGGCGCTGTTGGTTTGCTGTATTTCCGTTGCATATACGCTGACGAAATCCCAAGCAGGCGCATCGCCGTCCGGTGAGT  >  NZ_CP034943/80329‑80605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.