New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 607643239 (0.780)7 (0.020) 7/254 10.0 1.9% coding (486/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 607824 = 480 (1.650)coding (667/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 239 total aligned reads displayed.

TGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACG  >  NZ_CP034943/607505‑607782
                                                                                                                                          |                                                                                                                                           
cggACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                                                                            <  1:3406520/139‑1 (MQ=255)
   accaccAGGAGCGACCGGAGCTACAGGAGCTCCCGGTCCAGCCGGACCACCGGGTGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                                                                         <  1:3674404/140‑1 (MQ=14)
   aCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                                                                                         <  2:3866898/140‑1 (MQ=255)
    ccAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCAGCCGCAgagcc                                                                                                                                        >  2:3414494/1‑136 (MQ=255)
    ccAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        <  1:4197722/140‑1 (MQ=255)
       gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAGGTCGGAGCTTCAGGAGCGCCAGCAGAGCCGGGCTAATCCGGACCCGGCGGAGCGACggg                                                                                                                                     >  1:2010930/1‑140 (MQ=9)
        cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCTGGGAAGCCGGACCAGCCGGAGCGACCGGa                                                                                                                                    >  1:1957196/1‑140 (MQ=255)
        cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                                                                    <  1:3598061/140‑1 (MQ=255)
        cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGa                                                                                                                                    >  1:891754/1‑140 (MQ=255)
            agccccGGGAGCGACAGGACTTCCCGGGCTCGCCTGACCAGCCGGGGCCACGGGAGCCACAGTGGCGAGGGGGGAAGCCGGACCTTCCGGTGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                                <  2:3507137/135‑1 (MQ=17)
            aGCGCCGGGAGCGACAGGTGCTCCCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                                <  2:3379469/140‑1 (MQ=17)
            aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGCAGCGACCGGAGcga                                                                                                                                >  2:2479289/1‑138 (MQ=255)
            aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACGGGGGACGCCGGACCACCCGGAGCGACCGGAGcga                                                                                                                                >  2:1240357/1‑138 (MQ=14)
            aGCGACGGGAGAGACCTGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                                <  1:2797038/140‑1 (MQ=255)
                 cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACggga                                                                                                                           <  1:3382249/140‑2 (MQ=255)
                 cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                                           >  1:4017373/1‑140 (MQ=255)
                  gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                                                          >  1:4163273/1‑140 (MQ=255)
                  gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                                                          >  2:4274044/1‑140 (MQ=255)
                  gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                                                          >  1:1174863/1‑140 (MQ=255)
                     aGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                       <  2:1331718/140‑1 (MQ=255)
                     aGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                       <  1:3737995/140‑1 (MQ=255)
                          cAGGAGCTACCGGCGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                  <  1:1464263/140‑1 (MQ=255)
                                  aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                          >  1:2402277/1‑140 (MQ=255)
                                        gcacccGGCCCCGCCGGCGCCCCCGGAGCCACCGGCGCTACTGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGCGCTCCCGGCGAAGCCGGACCAACCGGAGCGAc                                                                                                    <  2:243912/136‑1 (MQ=14)
                                        gAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGGCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGTCAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGAc                                                                                                    >  1:4489107/1‑140 (MQ=18)
                                        gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGTAAGACCGAACTGCCGGAGCGCCAGGAGATACCGGCTAAGCCGGACCAACCGGAGCGAc                                                                                                    >  1:4348551/1‑140 (MQ=18)
                                        gAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGTGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                    <  2:2418044/140‑1 (MQ=255)
                                         aaGCCGGACCAGCCGGGGCCACGTGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAACCGGAGCGACa                                                                                                   >  1:785912/1‑140 (MQ=255)
                                             cGGACCAGCCGGCGCCCCGGGAGCCCCAGGGGCTCCCGGCGCCGCCGGACCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                               <  2:659246/140‑1 (MQ=17)
                                              ggACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGCGAAGCCGGACCAGCATGAGCGACAGGAGCTCCCGGCGAAGCCGGACCAACCGGAGCTACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGc                                                                                              >  1:3319107/1‑140 (MQ=17)
                                                aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                                                                                                     <  1:3426390/115‑1 (MQ=255)
                                                  cAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAGGGGGGTAGACGCAACACCCGGAGCGACAGGAGCAAGCGGGGCAGGGGGTCCCGCCGGAGCGACAGGAGCGAcc                                                                                          >  1:3266665/1‑140 (MQ=14)
                                                   cgCCGGCGCCACCGGAGCCCCAGGCGCCACGGGCGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCg                                                                                         <  2:497209/139‑1 (MQ=14)
                                                     ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                       >  2:2931902/1‑140 (MQ=255)
                                                         ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGAGAGCAGCTAGCGGCGAAGCCGGACCAACCTGAGCTACAGCAGCTACCGGGGAAg                                                                                   >  1:2452568/1‑140 (MQ=14)
                                                           ccACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                            >  1:4402947/1‑113 (MQ=255)
                                                              cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa                                                                                                     <  1:999534/117‑1 (MQ=255)
                                                                  aGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                                                      <  2:4246557/80‑1 (MQ=255)
                                                                  aGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                                                      >  1:4246557/1‑80 (MQ=255)
                                                                   gCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGc                                                                         >  2:1185190/1‑140 (MQ=255)
                                                                    ccACAGGGTCTACTGGGTAAGCCGGCCCCCCCGGAGCGACAGGTGCTACCGGGGAAGCCGGAGCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                        <  2:2190304/140‑1 (MQ=14)
                                                                      acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                 <  1:4671198/97‑1 (MQ=40)
                                                                      acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                      <  1:3854181/140‑1 (MQ=255)
                                                                           ggCTTCTGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGa                                                                 <  1:3518012/140‑1 (MQ=255)
                                                                            gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                 >  1:1307500/1‑107 (MQ=40)
                                                                            gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                <  2:723286/140‑1 (MQ=40)
                                                                             cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACggg                                                                                                                                     >  2:1664103/1‑70 (MQ=25)
                                                                             cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                                                                   >  2:1820865/1‑103 (MQ=25)
                                                                             cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                               >  2:2897156/1‑140 (MQ=40)
                                                                             cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAGCCCGACCAGCCGGAGCGAct                                                               >  2:94357/1‑139 (MQ=255)
                                                                             cTACTGGCGAAGCCGGAGCAGACGGAGATTCTGGAGCGACCGGGGAAGCAGGAGCATCCGGTGCTACAGGAGCTACCGGTGAAGCCGGACCAACCGGAGCGACAGTCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                               <  1:443798/140‑1 (MQ=11)
                                                                               aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGGAGCGGGACCAGCCGGAGCGACAgg                                                             >  1:2473886/1‑140 (MQ=255)
                                                                               aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                         <  2:986958/128‑1 (MQ=40)
                                                                               aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                         >  1:986958/1‑128 (MQ=40)
                                                                               aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                             <  1:2659665/140‑1 (MQ=255)
                                                                                 tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGACGCCGGACCACCCGGAGCCACAGGAg                                                           >  2:3489487/1‑140 (MQ=11)
                                                                                  ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                              <  2:1398754/120‑1 (MQ=35)
                                                                                    ggcaGCCGGACCACCCGGAGCGACACGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                        <  2:2750679/137‑1 (MQ=255)
                                                                                    ggAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                        <  1:2583921/140‑1 (MQ=255)
                                                                                    ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                        <  1:307420/140‑1 (MQ=255)
                                                                                      aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGCTGAAACCGGACCAGACGGAGCGACAGGAGCTAca                                                      >  1:275650/1‑139 (MQ=255)
                                                                                      aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                      >  1:4484036/1‑140 (MQ=255)
                                                                                      aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCCCCCGGCGCAGCCGGAGCCCCCGGAGCGCCAGGAGCGAcc                                                      >  2:4153773/1‑140 (MQ=11)
                                                                                      aaGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAACCGGACCAGCAGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACAGGAGCGACAGGAGCAACCGGCGCACCGGGACAAACcggagcgaccggagcgacg                                                      >  1:1694584/1‑139 (MQ=11)
                                                                                             accccccGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                               <  1:215272/135‑1 (MQ=255)
                                                                                             aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAACAGCCGGAGCGACAGGATCGAACGGGGAAg                                               >  2:3105400/1‑140 (MQ=255)
                                                                                             aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGGCCAACCGGCGCGGCGGGAGCGACAGGGGTAGCGGGAGCACCCGGAGCGCCAGGAGCGACCGGGGAAg                                               >  2:3445621/1‑140 (MQ=14)
                                                                                             aCCAGCCGGAGCCACAGGAGCTACAGGGGCAGCCGGAGCACCCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                               <  1:707742/140‑1 (MQ=14)
                                                                                                 gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                    <  1:511357/83‑1 (MQ=31)
                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCggg                                          >  2:3583046/1‑139 (MQ=255)
                                                                                                  ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                          >  2:3167343/1‑140 (MQ=255)
                                                                                                           cAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGCAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                 <  1:453161/140‑1 (MQ=255)
                                                                                                            aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                >  1:2600676/1‑140 (MQ=255)
                                                                                                                 cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAca                           >  1:496246/1‑139 (MQ=39)
                                                                                                                   cccgcgcaaGCCCGACCAGCCCGAGCGCCAGGAGCTACCGGCGAAGCCCGCCCAACCGCTGCGACACGAGCTACCGGGGAAGCCGGACCCGCCGGAGCGTCAGGTGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                         <  2:3393643/133‑1 (MQ=14)
                                                                                                                   aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCTACCGGAGCGACcgg                         >  2:1484278/1‑140 (MQ=255)
                                                                                                                   aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                         >  2:4477353/1‑140 (MQ=255)
                                                                                                                    ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGa                        >  1:1491348/1‑140 (MQ=255)
                                                                                                                      ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGc                      >  2:2704824/1‑140 (MQ=40)
                                                                                                                         gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGa                                                                     >  2:706764/1‑90 (MQ=38)
                                                                                                                         gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                   <  1:629017/108‑1 (MQ=35)
                                                                                                                         gAACCCGGACCCTCCGGAGCGACCGGTGATACCGGTGCAGCCGGACCCTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  2:1957196/140‑1 (MQ=14)
                                                                                                                         gAACCCGGACCCGCCGGAGCGACAGGTGCTACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  1:2729560/140‑1 (MQ=255)
                                                                                                                          aatgcGGACCAGGCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                  <  1:2491448/136‑1 (MQ=255)
                                                                                                                          aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                  <  2:4416393/140‑1 (MQ=255)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGCGCGACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                <  2:2974595/140‑1 (MQ=255)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                                                                   >  1:2812482/1‑57 (MQ=31)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                                                                   <  2:4505368/57‑1 (MQ=31)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                                                                   >  1:269087/1‑57 (MQ=31)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                                                                        <  2:221846/68‑1 (MQ=35)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCgg                                                                                        >  1:221846/1‑68 (MQ=35)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                >  2:4657291/1‑140 (MQ=255)
                                                                                                                            gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                <  2:4706840/140‑1 (MQ=255)
                                                                                                                            cccGGACCAGCCGGAGCGACACGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                <  1:182566/139‑1 (MQ=255)
                                                                                                                            cccGCACCAGCCGGAGCGCCAGGAGCTTCAGGGGAAGCCCGACCACCCGGAGCGACAGGACCAACCGGGGCCGCAGGACCAGCGGGCTCGAACCGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                <  2:4556634/139‑1 (MQ=14)
                                                                                                                              cGGACCCGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  1:3168405/140‑1 (MQ=255)
                                                                                                                              cGGACCAGCCGGAGCTACAGGAGCTACCGGGTAAGCCGGACCAACGGGAGCGAGAGGAGCTACCGGGTAAGCCGTACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  1:2931902/140‑1 (MQ=14)
                                                                                                                              cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  1:2818193/140‑1 (MQ=255)
                                                                                                                                 cccttccGGAGCGACCGGTGCCACCGCGCTGGCAGTAGCACCCGGAGCGACCGGAGCTACGGGCTCATCCGGACCAGCCGGAGCGACAGGCGCTACCGGCGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa           <  1:1109457/135‑1 (MQ=9)
                                                                                                                                   cAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACt         <  1:102308/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
TGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACG  >  NZ_CP034943/607505‑607782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.