New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 607349 =340 (1.110)14 (0.050) 8/248 9.4 5.1% coding (192/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 = 607627 209 (0.740)coding (470/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 246 total aligned reads displayed.

AGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACA  >  NZ_CP034943/607490‑607766
                                                                                                                                         |                                                                                                                                           
cgcgaCCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                           <  1:1969192/136‑1 (MQ=255)
 gcTCCCGGCGAAGCTGGACCACCTGGAGCCACGGGAGCGACCGGACCTACCGGCGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                                          <  1:2793292/140‑1 (MQ=18)
  cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGCGCTACAGGGGAAGCAGGACCGGGGGGAGCGACGGGAGCGACCGGGGCAGcc                                                                                                                                         >  2:962591/1‑140 (MQ=21)
   tACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCg                                                                                                                                        >  1:4267369/1‑140 (MQ=255)
    aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCgg                                                                                                                                       >  2:1262549/1‑140 (MQ=255)
    aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCCGCGCGACCGGAGCCCCCGGGGCTGCTGGGGAAGACGGACCTGCCGGAGCGACCGGAGCTACCGGGGAAGCCgg                                                                                                                                       >  2:2168340/1‑140 (MQ=18)
     ccGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGCCCACGGGAGCGACGGGGGCGACGGGGGCAGCCGGCGCAGCCGGACCGGCCGGAGCGACCGGGGCCGCCggc                                                                                                                                      >  2:4197722/1‑139 (MQ=11)
      cGGGGAAGCTGGACCATCTGGAGCGACGGGAGCGACAGGAGCTACAGGGGAAGACGGACCTCCCGGCGCCACGGGAGCCACAGGGGCAACTGGGGAATCAGGACCAGCCTGAGCGACAGGAGCTACCGGGGACGCCGGAc                                                                                                                                     >  2:402131/1‑140 (MQ=18)
      cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCCACAGGGACTACTGGGCCAGCCGGAGCCGCCGGAGCGTCAGTAGCTAACAGCGAAgaggcac                                                                                                                                     >  2:298544/1‑134 (MQ=18)
      cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAGCGGGGCCACCGGAGCCACAGGGGCTACTGGGGAAGCAGCACGATCCGCAGCGACAGGAGCTACCGGGGACGCGGGAc                                                                                                                                     >  2:4535633/1‑140 (MQ=18)
          gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACAGGGGAACAAGTACCACCCGGCGAGACCGGAGCCACAGGGGGATCGGGGCAAGCCGGACGAGCCGGAGCGACAGGTGCGGCGGGGGCAGCGGGAcgggc                                                                                                                                 >  1:3676021/1‑136 (MQ=12)
           cccccggACCCGCGGGAGCTACGGGTGCGGGTGGAGCAGCCGGGGAAGCCGGACCGTCGGGCGCCACGGGAGCCACCGGGGATCCTGGGGAAGCCGGACCCCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                                <  1:4419046/135‑1 (MQ=9)
             gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                              <  1:6091/140‑1 (MQ=255)
               tGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgggg                                                                                                                            >  1:250746/1‑138 (MQ=255)
               cggACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                                                            <  1:3406520/139‑1 (MQ=255)
                   ccATCTGTAGCGACGTGAGCGACAGTAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCCACAGGGGCTACTGGTGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                        <  2:2403214/140‑1 (MQ=17)
                      gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAGGTCGGAGCTTCAGGAGCGCCAGCAGAGCCGGGCTAATCCGGACCCGGCGGAGCGACggg                                                                                                                     >  1:2010930/1‑140 (MQ=9)
                       cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGa                                                                                                                    >  1:891754/1‑140 (MQ=255)
                           aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                >  1:2974595/1‑140 (MQ=255)
                           aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                >  1:4706840/1‑140 (MQ=255)
                           aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGCAGCGACCGGAGcga                                                                                                                >  2:2479289/1‑138 (MQ=255)
                           aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACGGGGGACGCCGGACCACCCGGAGCGACCGGAGcga                                                                                                                >  2:1240357/1‑138 (MQ=14)
                               aCGGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                                                            <  2:3236190/140‑1 (MQ=255)
                                cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCGACCggc                                                                                                           >  2:3409473/1‑139 (MQ=255)
                                cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                           >  1:4017373/1‑140 (MQ=255)
                                 gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggtg                                                                                                          >  1:1916605/1‑138 (MQ=255)
                                 gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                                          >  1:4163273/1‑140 (MQ=255)
                                 gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                                          >  1:1174863/1‑140 (MQ=255)
                                    aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                       <  1:3267708/140‑1 (MQ=255)
                                    aGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                       <  1:3737995/140‑1 (MQ=255)
                                      cGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                                                                                       <  2:673579/122‑2 (MQ=255)
                                         cAGGAGCTACCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                  <  1:2236034/140‑1 (MQ=255)
                                         cAGGAGCTACCGGCGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                  <  1:1464263/140‑1 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCTACAGGAGCTACCGGGGAAGCCTGACCAACCgg                                                                                          >  1:2190304/1‑140 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                          <  1:3853002/140‑1 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                          <  1:4215111/140‑1 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                          <  1:2749682/140‑1 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                          >  1:723286/1‑140 (MQ=255)
                                                 aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCgg                                                                                          >  1:3213105/1‑140 (MQ=255)
                                                       gAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGGCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGTCAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGAc                                                                                    >  1:4489107/1‑140 (MQ=18)
                                                       gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCGCCAGGAGCTCCGGGGGGCGCCGGCCCGACCGGAGCGAc                                                                                    >  1:3665011/1‑140 (MQ=17)
                                                       gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGTAAGACCGAACTGCCGGAGCGCCAGGAGATACCGGCTAAGCCGGACCAACCGGAGCGAc                                                                                    >  1:4348551/1‑140 (MQ=18)
                                                       gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                    >  1:2817035/1‑140 (MQ=255)
                                                         aGCCGGAGGAGCCGGCGCCACCGGAGCCAAAGGTGCTACTGGTGAAGCCGGACCACCCGGAGCTACAGGAGCTACCGGCGACCCGGGACCATCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAg                                                                                  <  1:3438676/140‑1 (MQ=14)
                                                               cccAGCCGGCGCCACGCGACCCACACGCGCTACTGGCGAAGCCGGACCACCCGGAGCCACAGGATCTACCGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTACCGGGGAAGCCGTACCATCCGGAGCCACAGGAGCTa                                                                            <  2:785912/139‑1 (MQ=14)
                                                                    ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCAACCGGAGCGACAGGAGCTACCggg                                                                       >  2:2931902/1‑140 (MQ=255)
                                                                        ggCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGAGAGCAGCTAGCGGCGAAGCCGGACCAACCTGAGCTACAGCAGCTACCGGGGAAg                                                                   >  1:2452568/1‑140 (MQ=14)
                                                                          ccACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                            >  1:4402947/1‑113 (MQ=255)
                                                                                 aGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                                      <  2:4246557/80‑1 (MQ=255)
                                                                                 aGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                                      >  1:4246557/1‑80 (MQ=255)
                                                                                  gCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGc                                                         >  2:1185190/1‑140 (MQ=255)
                                                                                     acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                 <  1:4671198/97‑1 (MQ=40)
                                                                                           gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                <  2:723286/140‑1 (MQ=40)
                                                                                           gCTACGGGGGAAGCCGGACCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                <  2:2217986/140‑1 (MQ=255)
                                                                                            cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAcg                                                                                   >  2:1820865/1‑103 (MQ=25)
                                                                                            cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                               >  2:2897156/1‑140 (MQ=40)
                                                                                            cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                               >  2:433176/1‑140 (MQ=40)
                                                                                             tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                                           >  2:150089/1‑47 (MQ=38)
                                                                                              aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCgcccgg                                             >  2:102308/1‑135 (MQ=255)
                                                                                              aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                         <  2:986958/128‑1 (MQ=40)
                                                                                              aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                         >  1:986958/1‑128 (MQ=40)
                                                                                              aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                             >  2:2429881/1‑140 (MQ=255)
                                                                                              aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                             <  1:2659665/140‑1 (MQ=255)
                                                                                                tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGACGCCGGACCACCCGGAGCCACAGGAg                                           >  2:3489487/1‑140 (MQ=11)
                                                                                                tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                           >  2:354477/1‑140 (MQ=40)
                                                                                                tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGCCGCGGGACCAGCCGGAGCGACAGGAg                                           >  2:450524/1‑140 (MQ=255)
                                                                                                   ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                     >  1:3343114/1‑63 (MQ=35)
                                                                                                    gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAc                                       >  2:1544175/1‑140 (MQ=255)
                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCCACAGGAGCTACAGGGGAAGCCGGACCAGCCGGAGCTACCGGAGCGAcc                                      >  1:4457732/1‑140 (MQ=11)
                                                                                                     aaGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAACCGGACCAGCAGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACAGGAGCGACAGGAGCAACCGGCGCACCGGGACAAACcggagcgaccggagcgacg                                      >  1:1694584/1‑139 (MQ=11)
                                                                                                       gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGCCCGGAGCGACAGGGGCAGCCGGACCAGCCGGAGCGCCAGCAGCGACCgg                                    >  2:2780665/1‑140 (MQ=14)
                                                                                                       gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCAc                                                                           >  2:1475613/1‑101 (MQ=17)
                                                                                                        ccGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                   <  2:4588185/140‑1 (MQ=255)
                                                                                                            aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                               >  2:3435658/1‑140 (MQ=255)
                                                                                                            aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAACAGCCGGAGCGACAGGATCGAACGGGGAAg                               >  2:3105400/1‑140 (MQ=255)
                                                                                                              cAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                             <  1:2797220/140‑1 (MQ=255)
                                                                                                                gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                    <  1:511357/83‑1 (MQ=31)
                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCggg                          >  2:3583046/1‑139 (MQ=255)
                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                          >  2:3167343/1‑140 (MQ=255)
                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                          >  1:3390811/1‑140 (MQ=255)
                                                                                                                 ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGTAGCCGGACCGACCGGAGCGCCCGGAGCGACCGCGGAAGCCGGCCCGGGCGGAGCGGCGGGAGCGACCGGGGCGGCCggg                          >  2:4690807/1‑139 (MQ=11)
                                                                                                                   ggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAcc                        <  1:354477/140‑1 (MQ=255)
                                                                                                                     aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACCGGAGCGACCGGGGCAGCCGGACCac                      >  2:1340000/1‑139 (MQ=255)
                                                                                                                       cGACAGGAGCTACCGGGGAAGCGGGACCACCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGAGCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                    <  1:862659/140‑1 (MQ=255)
                                                                                                                         ccAGGAGCCACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGCAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                  <  2:2049607/139‑1 (MQ=14)
                                                                                                                          cAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGCAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                 <  1:453161/140‑1 (MQ=255)
                                                                                                                          cAGGAGCTACGGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                 <  1:1262549/140‑1 (MQ=255)
                                                                                                                           aGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                >  1:2600676/1‑140 (MQ=255)
                                                                                                                                cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAca           <  2:496246/140‑2 (MQ=39)
                                                                                                                                   ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGa        >  1:1491348/1‑140 (MQ=255)
                                                                                                                                     ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGc      >  2:3875349/1‑140 (MQ=255)
                                                                                                                                     ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGc      >  2:2704824/1‑140 (MQ=40)
                                                                                                                                       ggAAGCCGGACCAGCCGGAGCGACAGTAGCAACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAATCCGGACCACACGGATCGACAGGAGCTACCGGGGAAGCCGGACCAACCGTAGCGACGGGAGCca    >  1:2499212/1‑140 (MQ=14)
                                                                                                                                        gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGa                                                     <  1:706764/90‑1 (MQ=38)
                                                                                                                                        gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                   >  2:629017/1‑108 (MQ=35)
                                                                                                                                        gAACCCGGACCCTCCGGAGCGACCGGTGATACCGGTGCAGCCGGACCCTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac   <  2:1957196/140‑1 (MQ=14)
                                                                                                                                        gAACCCGGACCCGCCGGAGCGACAGGTGCTACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac   <  1:2729560/140‑1 (MQ=255)
                                                                                                                                         aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca  <  1:1034589/140‑1 (MQ=255)
                                                                                                                                         aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca  <  2:4416393/140‑1 (MQ=255)
                                                                                                                                         aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca  <  2:3390811/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
AGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACA  >  NZ_CP034943/607490‑607766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.