New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 427699661 (1.440)3 (0.010)
+ACTG		 3/242 NT 0.46% coding (37/108 nt) EO946_RS02195 YjcZ family sporulation protein
?NZ_CP034943 427700 = 667 (1.440)coding (36/108 nt) EO946_RS02195 YjcZ family sporulation protein
Rejected: Frequency below/above cutoff threshold.

GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/427561‑427699
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATG‑‑GCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGA  >  NZ_CP034943/427700‑427759
                                                                                                                                           ||||                                                              
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:1450772/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:1473721/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:204461/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:2741856/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:3058479/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:7288552/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  1:7596601/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  2:3388318/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  2:7582828/140‑1
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATATTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAA                                                                   <  2:127301/140‑1
                                                                 GCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAATAGAATAAACAATACAACGATTAAAGCGAAAGAACTGATGCCGCCGTAACCGCCGCCGTTAGAGTATCCTGACATAAGGTTTCACCTCCCTATGAAGGA  <  2:3265411/140‑1
                                                                                                    AATTAATAGAATAAACAATACAACGATTAAAGCGAAAGAACTGATGCCGCCGTAACCGCCGCCGTTAGAGTATCCTGACATAAGGTTTCACCTCCCTATG       <  1:4573202/100‑1
                                                                                                    AATTAATAGAATAAACAATACAACGATTAAAGCGAAAGAACTGATGCCGCCGTAACCGCCGCCGTTAGAGTATCCTGACATAAGGTTTCACCTCCCTATG       >  2:4573202/1‑100
                                                                                                                                           ||||                                                              
GTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/427561‑427699
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATG‑‑GCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGA  >  NZ_CP034943/427700‑427759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.