BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 427699	661 (1.440)	3 (0.010) +ACTG	3/242	NT	0.46%	coding (37/108 nt)	EO946_RS02195	YjcZ family sporulation protein
*	?	NZ_CP034943	427700 =	667 (1.440)	3 (0.010) +ACTG	3/242	NT	0.46%	coding (36/108 nt)	EO946_RS02195	YjcZ family sporulation protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 727 total aligned reads displayed.

GGTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACAATTCAACTAT  >  NZ_CP034943/427560‑427835

ggTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGAGGGTCAGCAGCTTAGAAGCCGCCACCAAACGCAGTCCCGACGATAATTAAAAGAATCAACCATACAACGATTAAAGCGAAAGa                                                                                                                                          >  1:6814397/1‑140 (MQ=255)

ggTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGa                                                                                                                                          <  1:6277350/140‑1 (MQ=255)

ggTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGa                                                                                                                                          <  1:2927155/140‑1 (MQ=255)

 gtgtTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAa                                                                                                                                         <  1:7596601‑M1/140‑2 (MQ=255)

 gtgtTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAa                                                                                                                                         <  1:204461‑M1/140‑2 (MQ=255)

 gtgtTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAa                                                                                                                                         <  1:3058479‑M1/140‑2 (MQ=255)

    tttCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATCATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATgg                                                                                                                                      >  1:397336/1‑140 (MQ=255)

    tttCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATgg                                                                                                                                      >  1:1370631/1‑140 (MQ=255)

    tttCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATgg                                                                                                                                      >  2:7580493/1‑140 (MQ=255)

        ttttttAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGt                                                                                                                                  <  1:5267016/140‑1 (MQ=255)

            ttAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAAcc                                                                                                                              >  1:1605539/1‑140 (MQ=255)

              aaaaCAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACCACGATTAAAGCGAAAGAATGGCCGTAAccgc                                                                                                                            <  2:827259/140‑1 (MQ=255)

              aaaaCAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAAccgc                                                                                                                            <  1:1473309/140‑1 (MQ=255)

              aaaaCAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAAccgc                                                                                                                            <  2:240434/140‑1 (MQ=255)

                        cgcAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTaga                                                                                                                  <  2:6355191/140‑1 (MQ=255)

                         gcAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAAGAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTagag                                                                                                                 <  1:812158/140‑1 (MQ=255)

                         gcAAGATGGAGATCTTGCGGCGCCCCCAGAGACGGTCAGCAGCTGAGAAGCCGCCAACAACCGCAGTCCCAACGATAATTAAAAGAATAAACAATCCACCCATTACAGCGAAAGAATGGCCGTAACCGCCGCAGTTagag                                                                                                                 <  2:1380887/140‑1 (MQ=255)

                             gATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGTATGGCCGTAACCGCCGCAGTTAGAGTATc                                                                                                             <  2:5624549/140‑1 (MQ=255)

                              atatAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATcc                                                                                                            <  1:4898594/137‑1 (MQ=255)

                              aTGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATcc                                                                                                            <  2:5321293/140‑1 (MQ=255)

                              aTGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATcc                                                                                                            <  2:6763317/140‑1 (MQ=255)

                              aTGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATcc                                                                                                            <  2:3448691/140‑1 (MQ=255)

                                    aTCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACAt                                                                                                      >  1:422149/1‑140 (MQ=255)

                                    aTCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACAt                                                                                                      <  1:2152350/140‑1 (MQ=255)

                                         tCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAAccgc                                                                                                                            <  2:6216683/113‑1 (MQ=255)

                                         tCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGc                                                                                                 >  1:3846932/1‑140 (MQ=255)

                                           ggCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCtt                                                                                               <  1:5948682/140‑1 (MQ=255)

                                             cgcCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCa                                                                                             <  2:3215424/140‑1 (MQ=255)

                                              gcCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATACACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCAc                                                                                            <  1:6357361/140‑1 (MQ=255)

                                              gcCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTACAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCAc                                                                                            <  2:6507531/140‑1 (MQ=255)

                                              gcCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCAc                                                                                            <  1:3318496/140‑1 (MQ=255)

                                                ccGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATACGGCTTCACCt                                                                                          <  2:1050430/140‑1 (MQ=255)

                                                ccGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCt                                                                                          <  2:7496906/140‑1 (MQ=255)

                                                ccGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCt                                                                                          <  2:2531283/140‑1 (MQ=255)

                                                 cGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAATGCTTCACCTc                                                                                         >  2:5470998/1‑140 (MQ=255)

                                                  gCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTcc                                                                                        <  1:5657765/140‑1 (MQ=255)

                                                    agagACGGTCAGGATCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCt                                                                                      <  1:4586840/140‑1 (MQ=255)

                                                    agagACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCt                                                                                      <  2:3357114/140‑1 (MQ=255)

                                                    agacACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCt                                                                                      <  1:572904/140‑1 (MQ=255)

                                                       gaCGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATg                                                                                   <  1:2286307/140‑1 (MQ=255)

                                                       gaCGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATg                                                                                   <  2:6595648/140‑1 (MQ=255)

                                                       caCGGTCAGCAGCTGAGAAGCCGCCAACAAACGCAGTCCCTACGATAATGAAAAGAATAAACACTACCACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATg                                                                                   <  2:2159192/139‑1 (MQ=255)

                                                         cGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGaa                                                                                 <  2:4110191/140‑1 (MQ=255)

                                                           gTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAgg                                                                               <  1:6452256/140‑1 (MQ=255)

                                                           gTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAgg                                                                               <  2:1630859/140‑1 (MQ=255)

                                                           gTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAgg                                                                               <  2:4565207/140‑1 (MQ=255)

                                                           gTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAAGTAAAAGAATAAACAATACAACGATTAAAGCGAAAGGATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAgg                                                                               >  1:4658830/1‑140 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAACAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGGAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:5784713/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGCTTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:3930300/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:6093157/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:2675805/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:4957555/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  1:2452435/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  1:6629751/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATGAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:4498087/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAAGTAAAAGAATAAACAAGACCACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:2105669/140‑1 (MQ=255)

                                                            tCAGCAGCTTAGAAGCAGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATGCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:4853904/140‑1 (MQ=255)

                                                                cagcTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCa                                                                                             >  2:2936774/1‑121 (MQ=255)

                                                                cagcTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAgg                                                                               <  2:2219106/135‑1 (MQ=255)

                                                                  gcTTAGAAGCCGCCAACAAACGCAGTCCCTACGATACTTACAAGAATAAACAAGACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGACGGATACtat                                                                        <  1:3619397/140‑1 (MQ=255)

                                                                   cTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACtata                                                                       >  2:4648009/1‑140 (MQ=255)

                                                                     tAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAg                                                                     <  1:4182981/140‑1 (MQ=255)

                                                                     tAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAg                                                                     >  2:4754223/1‑140 (MQ=255)

                                                                     tAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAg                                                                     <  1:7334204/140‑1 (MQ=255)

                                                                     tAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAg                                                                     <  2:3565701/140‑1 (MQ=255)

                                                                     tAGAAGCCGCCAACAAACGCACTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAg                                                                     <  2:7351925/140‑1 (MQ=255)

                                                                      aGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              >  2:7028644/1‑130 (MQ=255)

                                                                      aGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  1:7028644/130‑1 (MQ=255)

                                                                      aGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAgg                                                                    <  2:3806794/140‑1 (MQ=255)

                                                                             gccAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATg                                                                                   >  2:1581921/1‑118 (MQ=255)

                                                                             gccAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:398653/123‑1 (MQ=255)

                                                                             gccAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGAt                                                                             >  1:4344966/1‑124 (MQ=255)

                                                                             gccAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTg                                                             >  1:5463911/1‑140 (MQ=255)

                                                                              ccAACAACCGCAGTCCCTAAGATACTGAAAAGAAGACACAATCCACCGCTTACACCCAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCAATGAAGGATACTAAAAGGTATGCTGa                                                            <  2:5419991/140‑1 (MQ=255)

                                                                                    aaCGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGAt                                                      <  1:1731225/140‑1 (MQ=255)

                                                                                             ccTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGACGGATACTATAAGGTATGCTGAAACGATCGGCTTGGc                                             <  1:1001096/140‑1 (MQ=255)

                                                                                             ccTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGc                                             <  1:6131797/140‑1 (MQ=255)

                                                                                             ccTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGc                                             <  2:1265315/140‑1 (MQ=255)

                                                                                                ccGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCCgg                                          >  1:916429/2‑140 (MQ=255)

                                                                                                aCGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAgg                                          >  2:6859117/1‑140 (MQ=255)

                                                                                                     aaTTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGataa                                     >  2:5117114/1‑140 (MQ=255)

                                                                                                       ttAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTaga                                                                                                                  <  2:1923040/61‑1 (MQ=255)

                                                                                                       ttAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTaga                                                                                                                  >  1:1923040/1‑61 (MQ=255)

                                                                                                       ttAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCt                                                                                          >  1:6749789/1‑85 (MQ=255)

                                                                                                       ttAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGataata                                   >  2:590289/1‑140 (MQ=255)

                                                                                                             gAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGAc                             <  1:1214372/140‑1 (MQ=255)

                                                                                                                       tACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGc                                             >  1:721896/1‑114 (MQ=255)

                                                                                                                       tACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGc                                             >  1:5112415/1‑114 (MQ=255)

                                                                                                                       tACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGaaaaa                   >  2:5685269/1‑140 (MQ=255)

                                                                                                                       tACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGaaaaa                   >  2:367033/1‑140 (MQ=255)

                                                                                                                        aCAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGa                                                                              <  2:1809506/80‑1 (MQ=255)

                                                                                                                        aCAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTAGAAGGTATGCTGAAACGATCGTCTTGGCAGGGATAATAGTGTACAAGAGaaaaaa                  >  1:1794001/1‑140 (MQ=255)

                                                                                                                            cGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGaa              <  2:3063091/140‑1 (MQ=255)

                                                                                                                            cGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGaa              <  2:7263966/140‑1 (MQ=255)

                                                                                                                            cGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGaa              <  2:4275241/140‑1 (MQ=255)

                                                                                                                               ttAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACaa           >  2:2829654/1‑140 (MQ=255)

                                                                                                                               ttAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACaa           >  2:326972/1‑140 (MQ=255)

                                                                                                                               ttAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACaa           <  2:59555/140‑1 (MQ=255)

                                                                                                                               ttAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACaa           >  2:7668278/1‑140 (MQ=255)

                                                                                                                                       aaaGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACAATTCAACTa   >  1:2742748/1‑140 (MQ=255)

GGTGTTTCTTTTTTAAAACAGCGCCGCAAGATGTAGATCTTTCGGCGCCCGCAGAGACGGTCAGCAGCTTAGAAGCCGCCAACAAACGCAGTCCCTACGATAATTAAAAGAATAAACAATACAACGATTAAAGCGAAAGAATGGCCGTAACCGCCGCAGTTAGAGTATCCTGACATAAGGCTTCACCTCCCTATGAAGGATACTATAAGGTATGCTGAAACGATCGGCTTGGCAGGGATAATAGTGGACAAGAGAAAAAATGAACAATTCAACTAT  >  NZ_CP034943/427560‑427835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.