BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 4010190	765 (1.650)	6 (0.010)	4/252	NT	0.78%	intergenic (‑34/‑71)	EO946_RS20605/EO946_RS20610	hypothetical protein/MFS transporter
*	?	NZ_CP034943	4010195 =	755 (1.630)	6 (0.010)	4/252	NT	0.78%	intergenic (‑39/‑66)	EO946_RS20605/EO946_RS20610	hypothetical protein/MFS transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 795 total aligned reads displayed.

CGCTAACAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGATGGTACATA  >  NZ_CP034943/4010051‑4010329

   tAACAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCtgttg                                                                                                                                          <  1:1699053/140‑1 (MQ=255)

      cAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTcc                                                                                                                                       >  1:4987543/1‑140 (MQ=255)

      cAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTcc                                                                                                                                       >  2:4591126/1‑140 (MQ=255)

      cAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTcc                                                                                                                                       >  1:2484496/1‑140 (MQ=255)

      cAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTcc                                                                                                                                       >  1:2610621/1‑140 (MQ=255)

           aGATTGCCAGCAAAGCCGAGGAAATCTTGCCCCGTAATGACGACTTTACTGTGAAAGATACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGTCTTTTCCAGTCAAATTCCTGTTGTCCGTTTa                                                                                                                                  >  2:5298237/1‑140 (MQ=255)

             aTTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACg                                                                                                                                <  1:4365225/140‑1 (MQ=255)

             aTTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACg                                                                                                                                <  2:6254759/140‑1 (MQ=255)

               tGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCa                                                                                                                              >  2:4749865/1‑140 (MQ=255)

                gCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaa                                                                                                                             <  1:6600171/140‑1 (MQ=255)

                gCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaa                                                                                                                             >  2:1257572/1‑140 (MQ=255)

                gCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTGTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaa                                                                                                                             <  2:7480171/140‑1 (MQ=255)

                 ccAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCCTTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaaa                                                                                                                            >  1:7120522/1‑140 (MQ=255)

                 ccAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaaa                                                                                                                            >  2:2752100/1‑140 (MQ=255)

                 ccAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaaa                                                                                                                            >  2:3404413/1‑140 (MQ=255)

                 ccAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCaaa                                                                                                                            >  1:2752115/1‑140 (MQ=255)

                       aaGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTaca                                                                                                                      <  1:4020641/140‑1 (MQ=255)

                             aGGACATCTTGCCCCGTACTGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGGTGTCCGTTTACGCAAAAGTACACTGTgg                                                                                                                <  1:3802821/140‑1 (MQ=255)

                             aGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTgg                                                                                                                >  2:898694/1‑140 (MQ=255)

                                  aTCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTaca                                                                                                                      >  2:4246014/1‑129 (MQ=255)

                                    cTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTCTTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTaa                                                                                                         >  1:3017324/1‑140 (MQ=255)

                                    cTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTaa                                                                                                         >  1:3735457/1‑140 (MQ=255)

                                    cTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTaa                                                                                                         >  1:5745062/1‑140 (MQ=255)

                                    cTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTGTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTCTTTaa                                                                                                         >  1:7495764/1‑140 (MQ=255)

                                       gCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAAt                                                                                                      >  2:578495/1‑140 (MQ=255)

                                         cccGTAATGACGACTTTACTGTTAAAGCTACTCACATTTGGAGTGTTCATTTTTATTACTTTCATTATAAAGAACCTAGATTTTAAAGTCAAATTCCTGTTGTAATTTTAATCAAAAGTACACAGTGGTATTTAAAAatt                                                                                                    >  2:6352746/1‑140 (MQ=255)

                                          ccGTAATGACGACTGTAATGTTAAAGCTACTCCCCTTTGGAGTGTTCATTGTTATTACTTTCCTTCTAAACCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTCCGCAAAAGTACACTGTGGTATTTAAAATTTg                                                                                                   <  2:2876745/140‑1 (MQ=255)

                                            gTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGaa                                                                                                 <  1:7618653/140‑1 (MQ=255)

                                            gTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGaa                                                                                                 >  2:1782841/1‑140 (MQ=255)

                                             tAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAAt                                                                                                >  1:490237/1‑140 (MQ=255)

                                             tAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAAt                                                                                                >  2:2078746/1‑140 (MQ=255)

                                                 gacgacTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTa                                                                                            <  1:2113955/140‑1 (MQ=255)

                                                 gacgacTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTa                                                                                            <  2:2518624/140‑1 (MQ=255)

                                                 gacgacTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTa                                                                                            <  2:5507087/140‑1 (MQ=255)

                                                   cgacTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTAtt                                                                                          <  2:6939307/140‑1 (MQ=255)

                                                     acTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTc                                                                                        <  2:2992777/140‑1 (MQ=255)

                                                     acTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTc                                                                                        >  2:6689484/1‑140 (MQ=255)

                                                       tttACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCa                                                                                      >  2:397933/1‑140 (MQ=255)

                                                       tttACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCa                                                                                      >  2:5055517/1‑140 (MQ=255)

                                                         tACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATc                                                                                    >  1:1023098/1‑140 (MQ=255)

                                                              tgAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGgag                                                                               >  2:3746126/1‑140 (MQ=255)

                                                              tgAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGGGGTATTTAAAATTTGAATGGTATTTCCATCAGgag                                                                               >  1:4494678/1‑140 (MQ=255)

                                                                aaaGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             <  1:955369/140‑1 (MQ=255)

                                                                aaaGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             >  2:7312022/1‑140 (MQ=255)

                                                                aaaGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             <  2:7076373/140‑1 (MQ=255)

                                                                aaaGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             >  1:2349276/1‑140 (MQ=255)

                                                                aaaGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTGTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             >  1:6694887/1‑140 (MQ=255)

                                                                            cTTGGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGACTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACa                                                                 >  2:3866923/1‑140 (MQ=255)

                                                                               tGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             <  2:6800154/125‑1 (MQ=255)

                                                                                    tgtTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             >  2:7182018/1‑120 (MQ=255)

                                                                                     gtTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGtt                                                        >  1:81746/1‑140 (MQ=255)

                                                                                     gtTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGtt                                                        >  1:289920/1‑140 (MQ=255)

                                                                                     gtTCATTTTTATTACTTTCATTCTAAAGAACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATATAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGtt                                                        >  1:3553868/1‑140 (MQ=255)

                                                                                      ttCGTTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTTAATGGTATTTACATCATGAGATCATTATATGACAGAGGAGCttt                                                       >  1:2326852/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACg                                                                                                                                <  2:1910170/67‑1 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTCTTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGtttt                                                       >  1:3200889/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGa                                                                                                  <  1:3301082/97‑1 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGa                                                                                                  >  2:3301082/1‑97 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTAtt                                                                                          <  1:6426385/105‑1 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGTAGATCATGCTATGACAGAGGAGGttt                                                       >  1:5437293/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:541607/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:3436445/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:7248858/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:447667/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:4138040/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:5288492/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:1294918/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:6959192/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:1577473/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:3082341/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:6337140/1‑140 (MQ=255)

                                                                                      ttCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  1:6812940/1‑140 (MQ=255)

                                                                                      gtCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTAAAATGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGttt                                                       >  2:2201977/2‑140 (MQ=255)

                                                                                          tttttATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTtcat                                                   <  1:1811782/140‑1 (MQ=255)

                                                                                            tttATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTtcatca                                                 <  1:4669923/140‑1 (MQ=255)

                                                                                            tttATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTtcatca                                                 <  1:6125325/140‑1 (MQ=255)

                                                                                                     ttCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGtttt                                                      >  2:4926452/1‑126 (MQ=255)

                                                                                                               aGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGaa                              <  1:1604213/140‑1 (MQ=255)

                                                                                                               aGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGaa                              <  1:5155294/140‑1 (MQ=255)

                                                                                                               aGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGaa                              <  2:1740758/140‑1 (MQ=255)

                                                                                                               aGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGaa                              <  1:146161/140‑1 (MQ=255)

                                                                                                               aGCACCGGGCTTTTCAAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGTTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCTTGAGTCAAGAGCGCGTGaa                              <  1:4816608/140‑1 (MQ=255)

                                                                                                                  aCCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGAt                                                                             >  1:6510715/1‑90 (MQ=255)

                                                                                                                    cGGGCTTTTCCAGTCAAATTCCTTTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGc                         <  1:5661869/140‑1 (MQ=255)

                                                                                                                    cGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGc                         >  2:1091110/1‑140 (MQ=255)

                                                                                                                    cGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGc                         >  2:5679932/1‑140 (MQ=255)

                                                                                                                    cGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGc                         >  1:5563472/1‑140 (MQ=255)

                                                                                                                      ggCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCt                       >  2:5934699/1‑140 (MQ=255)

                                                                                                                      ggCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCt                       >  2:1358697/1‑140 (MQ=255)

                                                                                                                      ggCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCt                       <  2:1648360/140‑1 (MQ=255)

                                                                                                                      ggCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCt                       <  1:1979632/140‑1 (MQ=255)

                                                                                                                         ggttccAGTCAAATTCCTGccgtttatataaaagcgcgctgtggtatttaaaatttgaatggtttttctatcaggagatcatgctatgacagaggaggttttcatcatgagtcaagagcgcgtgaaacggcctgggcata                    <  2:64593‑M1/138‑122 (MQ=255)

                                                                                                                            tCCAGTCAAATTCCTGccgtttatataaaagcgcgctgtggtatttaaaatttgaatggtttttctatcaggagatcatgctatgacagaggaggttttcatcatgagtcaagagcgcgtgaaacggcctgggcatacca                 <  2:6151500‑M1/140‑125 (MQ=255)

                                                                                                                            tCCAGTCAAATTCCAGccgtttatataaaagcgcgctgtggtatttaaaatttgaatggtttttctatcaggagatcatgctatgacagaggaggttttcatcatgagtcaagagcgcgtgaaacggcctgggcatacca                 <  2:3543957‑M1/140‑125 (MQ=255)

                                                                                                                                 tCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAg            >  2:235333/1‑140 (MQ=255)

                                                                                                                                  cAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGa           <  1:4138040/140‑1 (MQ=255)

                                                                                                                                  cAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGa           <  1:5931233/140‑1 (MQ=255)

                                                                                                                                  cAAATTCCTGTTGTCAGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGa           <  1:4254445/140‑1 (MQ=255)

                                                                                                                                           gttgtCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGTCAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGATGGTACata  >  2:7560770/1‑140 (MQ=255)

                                                                                                                                           gttgtCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGaa                              >  2:6514890/1‑112 (MQ=255)

CGCTAACAATTAGATTGCCAGCAAAGCCGAGGACATCTTGCCCCGTAATGACGACTTTACTGTGAAAGCTACTCCCCTTTGGAGTGTTCATTTTTATTACTTTCATTCTAAAGCACCGGGCTTTTCCAGTCAAATTCCTGTTGTCCGTTTACGCAAAAGTACACTGTGGTATTTAAAATTTGAATGGTATTTCCATCAGGAGATCATGCTATGACAGAGGAGGTTTTCATCATGAGTCAAGAGCGCGTGAAACGGCCTGGACATACCAGATGGTACATA  >  NZ_CP034943/4010051‑4010329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.