New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 917510 =509 (1.620)1216 (3.900)
+G
4/250 NT 73.0% intergenic (+294/‑1) EO946_RS04665/EO946_RS04670 nucleotidyltransferase‑like protein/16S ribosomal RNA
?NZ_CP034943 2982587 = 398 (1.270)intergenic (‑68/‑606) EO946_RS15435/thiT 16S ribosomal RNA/energy‑coupled thiamine transporter ThiT

Only 100 of 1311 total aligned reads displayed.

TTACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/917648‑917510
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGATCATTTTGTT  >  NZ_CP034943/2982587‑2982680
                                                                                                                                           |                                                                                              
  ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              <  2:3539325/140‑1
  ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              <  2:3460393/140‑1
  ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              >  1:1413599/1‑140
  ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              >  1:3380594/1‑140
  ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              >  1:2459365/1‑140
   CAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAG                                                                                             >  2:2417793/1‑140
      GCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTT                                                                                          >  2:191193/1‑140
        AGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGA                                                                                        >  2:535604/1‑140
        AGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGA                                                                                        >  2:1175728/1‑140
        AGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGA                                                                                        <  1:1716478/140‑1
        AGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGA                                                                                        >  1:3462185/1‑140
         tGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  2:860748/139‑1
         gggTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  1:1654842/137‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTTAGCCTTTATAAAACTCTCCGATAAAGTATTTTGAC                                                                                       <  2:4509148/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATACAGTAGTTTGAC                                                                                       <  2:4367040/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  2:1639403/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  1:4276350/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  1:1121636/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  2:638225/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  1:2944906/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  1:2350907/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAC                                                                                       <  2:76584/140‑1
         GGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTACGATAAAGTAGTTTGAC                                                                                       <  1:2231310/140‑1
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTCTTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  2:3941301/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTCGTTTGACT                                                                                      >  1:3936000/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  2:1991367/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  2:4182370/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  1:910884/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  1:3521918/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  1:818956/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  1:4358373/1‑140
          GTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTGGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACT                                                                                      >  2:4092903/1‑140
          GTTACCAACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGAAAGCTCACATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAAATCTCAGATAAAGTAGTTTGACT                                                                                      >  1:2809767/1‑140
              aCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  <  2:3845903/139‑1
              CCCACGTGTTACTCACCCGTCCGCCTCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTGGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  <  2:2943655/140‑1
              CCCACGTGTTACTCACCCGTCCGCCGCTAACCTCAGGGAGCAAGCGCCCATCTGTCCGCGAGACTTGCATGTATTAGGCACGCCGCCACCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGAAGTTTGACTGACT                                                                                  <  1:3750757/140‑1
              CCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  <  1:4462120/140‑1
              CCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  <  2:4875227/140‑1
              CCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  <  1:2619558/140‑1
                  CGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGC                                                                              >  1:305687/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGCTAAAGTAGTTTGACTGACTACGCAC                                                                            >  2:2039265/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  2:4024561/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  1:4005616/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  2:3249269/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  1:205450/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  2:2284373/1‑140
                    TGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCAC                                                                            >  1:3251599/1‑140
                      TTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACAT                                                                          >  2:2836717/1‑140
                        ACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCG                                                                        <  2:4436178/140‑1
                        ACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCG                                                                        <  2:464714/140‑1
                            ACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGT                                                                    >  1:2700650/1‑140
                             CCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTG                                                                   <  1:1198905/140‑1
                             CCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTG                                                                   >  2:3329277/1‑140
                             CCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTG                                                                   >  1:1008087/1‑140
                             CCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTG                                                                   >  1:4911128/1‑140
                              CCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGC                                                                  >  1:4129066/1‑140
                              CCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGC                                                                  >  2:4966782/1‑140
                              CCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGA                                                                                    <  2:3657439/122‑1
                              CCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGA                                                                                    >  1:3657439/1‑122
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCCGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAGTGACTACGCACATCGCGGTGCGAT                                                               >  2:1056449/1‑140
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGAT                                                               >  1:5159206/1‑140
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGAT                                                               >  2:5085581/1‑140
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGAT                                                               >  1:3328575/1‑140
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGAATGACTACGCACATCGCTGTGCGAT                                                               >  1:1331532/1‑140
                                 TCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCAGGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGAT                                                               >  2:2757360/1‑140
                                  CCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATT                                                              >  1:1549175/1‑140
                                        CTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAA                                                        >  1:757215/1‑140
                                        CTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAA                                                        >  2:1524428/1‑140
                                         TAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTATAAAA                                                      <  1:5019447/140‑1
                                          AACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAA                                                      <  2:4584017/140‑1
                                           ACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGTCTGACTACGCACATCTCTGTGCGATTTTATAAAta                                                     >  2:3730681/1‑138
                                           ACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAA                                                     <  2:1697122/140‑1
                                            CATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAAT                                                    <  1:3125942/140‑1
                                                AGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAAT                                                >  2:2575650/1‑140
                                                   GAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAA                                             <  2:1458926/140‑1
                                                       AAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGG                                         >  2:2493506/1‑140
                                                        AGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGT                                        <  2:2210651/140‑1
                                                        AGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGT                                        <  2:2703179/140‑1
                                                        AGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGT                                        <  1:481953/140‑1
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTT                            >  1:2398709/1‑140
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTT                            >  1:4654128/1‑140
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTT                            >  2:4261612/1‑140
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTGTTGTCTT                            >  2:1279398/1‑140
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGCTACGTTTTGTCTT                            >  1:4555796/1‑140
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAA                                                 >  2:2144583/1‑119
                                                                    TCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTA                                                                                              >  1:1511736/1‑74
                                                                         TCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTA                       <  1:3852970/140‑1
                                                                               TGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTC                 <  1:526300/140‑1
                                                                                 CATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAA               >  1:615286/1‑140
                                                                                    ggATTAGGCACGCCGCCAGCGTTCGTCCGGAGCCAGGATCAACCTCTCCGATAAAGTAGATTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGA            <  2:3068728/138‑1
                                                                                    GTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGA            <  2:1389107/140‑1
                                                                                     TATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGAT           <  1:2148587/140‑1
                                                                                       TTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTAC                                                                                <  2:518944/69‑1
                                                                                       TTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCAGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTCCGTGTTGTCTTGTTTAGTTTTCAAAGATCA         >  2:337149/1‑140
                                                                                        TAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACGGACTACGCACATCGCTGTGCGATTTTATACAAAGTCATTAACAGGTACGGTTGGTGTGGTTTAGTGTTGAATGATCtt        >  2:3129159/1‑138
                                                                                               GCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCA                                                                             >  1:1949145/1‑64
                                                                                               GCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACT                                                                                  >  2:1823361/1‑59
                                                                                               GCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAG                                                                                             >  1:1788519/1‑48
                                                                                                CCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAA              >  1:4754873/1‑126
                                                                                                CCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAAGTAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAA              <  2:4754873/126‑1
                                                                                                                                           |                                                                                              
TTACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCATCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/917648‑917510
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGTTTGACTGACTACGCACATCGCTGTGCGATTTTATAAAAATGAATTAACAGGTACGTTTTGTCTTGTTTAGTTTTCAAAGATCATTTTGTT  >  NZ_CP034943/2982587‑2982680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.