BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	2526375 =	283 (0.900)	3 (0.010)	3/252	NT	0.85%	intergenic (‑96/‑100)	nucB/sigK	sporulation‑specific Dnase NucB/RNA polymerase sporulation sigma factor SigK
*	?	NZ_CP034943	3751590 =	415 (1.320)	3 (0.010)	3/252	NT	0.85%	coding (64/600 nt)	EO946_RS19305	DsbA family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 449 total aligned reads displayed.

ATTGGCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAAAGAAG  >  NZ_CP034943/3751451‑3751725

aTTGGCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGc                                                                                                                                         <  1:926790/140‑1 (MQ=255)

 ttGGCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCg                                                                                                                                        >  1:4494517/1‑140 (MQ=255)

    gCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCt                                                                                                                                     >  2:1933479/1‑140 (MQ=255)

    gCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCt                                                                                                                                     >  1:458621/1‑140 (MQ=255)

              tGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCAAATGa                                                                                                                           >  1:4984753/1‑140 (MQ=255)

               gTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGaa                                                                                                                          <  2:4018065/140‑1 (MQ=255)

                    ccACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTTTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACaaa                                                                                                                     <  1:4226589/140‑1 (MQ=255)

                    ccACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACaaa                                                                                                                     >  1:2677956/1‑140 (MQ=255)

                     cactTGTACTGTTTGTAAGGATCATTGACCGGGTCAAGCTGTGGAGATTGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACaaaa                                                                                                                    <  1:3806128/140‑1 (MQ=255)

                         tGTACTGTTTGGAAGGATCATTGCCCGGGGCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCACCCTCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATggg                                                                                                                <  1:3330831/140‑1 (MQ=255)

                         tGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATggg                                                                                                                <  1:437751/140‑1 (MQ=255)

                         tGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATggg                                                                                                                <  1:1490452/140‑1 (MQ=255)

                         tGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATggg                                                                                                                <  1:78965/140‑1 (MQ=255)

                               gTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAACCGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACg                                                                                                          <  2:4641244/140‑1 (MQ=255)

                               gTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACg                                                                                                          >  2:3599342/1‑140 (MQ=255)

                                tttGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGt                                                                                                         >  1:4135513/1‑140 (MQ=255)

                                tttGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGt                                                                                                         >  1:4024168/1‑140 (MQ=255)

                                tttGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGt                                                                                                         >  2:4420296/1‑140 (MQ=255)

                                  tGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTaa                                                                                                       >  1:313310/1‑140 (MQ=255)

                                  tGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTaa                                                                                                       >  2:1534358/1‑140 (MQ=255)

                                  tGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTaa                                                                                                       >  2:4842226/1‑140 (MQ=255)

                                  tGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCATTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGACACAAAATGGGCAGACGTaa                                                                                                       >  1:2149779/1‑140 (MQ=255)

                                     aaGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTActct                                                                                                    >  2:2775806/1‑140 (MQ=255)

                                     aaGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCt                                                                                                    >  2:2115705/1‑140 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGATATGGGCTTGGGCGAAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAAt                                                                                                <  2:2440643/140‑1 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCCAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGTCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGact                                                                                                <  1:69617/140‑3 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAAt                                                                                                <  2:566919/140‑1 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAAt                                                                                                <  2:3878269/140‑1 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAAt                                                                                                <  1:361245/140‑1 (MQ=255)

                                         aTCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAAt                                                                                                <  2:4896289/140‑1 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAACAGCGGCTTTTCCAATGAAACAACATGGGCAGGCGTAATCTGAATa                                                                                               >  2:689166/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCCGACGTCATCTGAATa                                                                                               >  2:589246/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATa                                                                                               >  1:2049342/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATa                                                                                               >  2:5044786/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATa                                                                                               >  1:230710/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATa                                                                                               >  2:952343/1‑140 (MQ=255)

                                          tCATTGACCGGGTCAAGCTGTGGAGATGGGCGTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATa                                                                                               >  2:3965647/1‑140 (MQ=255)

                                              tGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           <  1:166390/140‑1 (MQ=255)

                                              tGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           <  1:1210407/140‑1 (MQ=255)

                                              tGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           <  1:2583625/140‑1 (MQ=255)

                                                aCCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCtt                                                                                         <  2:5120129/140‑1 (MQ=255)

                                                 ccGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTg                                                                                        <  2:4228174/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  2:4375730/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  1:5183584/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  2:2604546/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      >  1:4300170/1‑140 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  1:2096300/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  1:2472747/140‑1 (MQ=255)

                                                   gggTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  1:2983235/140‑1 (MQ=255)

                                                     gTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAtgt                                                                                    >  2:2491465/1‑140 (MQ=255)

                                                     gTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAtgt                                                                                    >  2:1086619/1‑140 (MQ=255)

                                                     gTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAtgt                                                                                    >  1:1283220/1‑140 (MQ=255)

                                                      tCAAGCTGTGGAGATGGGCTTGGGCGCACTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAtgtg                                                                                   <  2:2823827/140‑1 (MQ=255)

                                                        aaGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTa                                                                                 <  2:1262303/140‑1 (MQ=255)

                                                        aaGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTa                                                                                 <  1:1086619/140‑1 (MQ=255)

                                                           cTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTg                                                                              <  1:2616310/140‑1 (MQ=255)

                                                            tgtgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGt                                                                             <  2:2688227/140‑1 (MQ=255)

                                                              tgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCa                                                                           >  2:3433199/1‑140 (MQ=255)

                                                              tgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCa                                                                           <  1:1359457/140‑1 (MQ=255)

                                                              tgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCa                                                                           >  1:3429746/1‑140 (MQ=255)

                                                              tgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCa                                                                           >  2:2313235/1‑140 (MQ=255)

                                                              tgGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCa                                                                           >  2:1323463/1‑140 (MQ=255)

                                                                     gggCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAAt                                                                    >  1:1855068/1‑140 (MQ=255)

                                                                     gggCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAAt                                                                    <  2:4483076/140‑1 (MQ=255)

                                                                      ggCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAAtc                                                                   >  1:193483/1‑140 (MQ=255)

                                                                        cTTGGGCGCCGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTCATCTGCATAAACCTTGATGTGTACTGTCATGATAAtctc                                                                 >  2:747153/1‑140 (MQ=255)

                                                                        cTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAAtctc                                                                 >  1:5123281/1‑140 (MQ=255)

                                                                        cTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAAtctc                                                                 >  2:1572221/1‑140 (MQ=255)

                                                                          tGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCt                                                               <  2:2267991/140‑1 (MQ=255)

                                                                          tGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCt                                                               <  1:3270706/140‑1 (MQ=255)

                                                                           gggCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCtt                                                              >  1:274160/1‑140 (MQ=255)

                                                                                cAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGta                                                         >  2:3626566/1‑140 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGTGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGtat                                                        >  2:2531153/1‑140 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           <  1:1179210/105‑1 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           >  2:1179210/1‑105 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAAcc                                                                                           <  1:579344/105‑1 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGtat                                                        >  2:3138630/1‑140 (MQ=255)

                                                                                 aGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGtat                                                        >  2:1663128/1‑140 (MQ=255)

                                                                                     cAAACGGCATCCACTAGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGt                                                    <  2:3828022/140‑1 (MQ=255)

                                                                                          ggCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAAGGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATACGTTGAtt                                               <  2:4717268/140‑1 (MQ=255)

                                                                                          gccATCCACTCGACTACAACCTCCTTTACGTGTCTCGCCTCATCAAACGCGGCTTTTCCCATGAACCAAAATGGGCACACGTAATCTGAATACACCTGGATGAGTACTGTCATGATAATCTCCTTTCGTATAAGTTGAtt                                               <  2:3005998/138‑1 (MQ=255)

                                                                                             aTCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTAGTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTa                                            >  1:5002743/1‑140 (MQ=255)

                                                                                             aTCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGtat                                                        <  1:998681/128‑1 (MQ=255)

                                                                                             aTCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTa                                            >  2:1978467/1‑140 (MQ=255)

                                                                                             aTCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTa                                            >  1:474261/1‑140 (MQ=255)

                                                                                             aTCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGAGTTTa                                            >  1:1549762/1‑140 (MQ=255)

                                                                                               ccACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTaaa                                          <  1:4863641/140‑1 (MQ=255)

                                                                                                   tCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGt                                      <  2:2848849/140‑1 (MQ=255)

                                                                                                    cGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGtat                                                        <  2:3533856/121‑1 (MQ=255)

                                                                                                          cAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAAtt                               >  1:1810062/1‑140 (MQ=255)

                                                                                                                ccTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTAGAAGTTGATTTTAAACTGTAACAATTAAAGtt                         >  1:2955226/1‑140 (MQ=255)

                                                                                                                 cttttcttttATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTa                        >  2:174459/1‑140 (MQ=255)

                                                                                                                 cttttcttttATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTa                        >  2:2200539/1‑140 (MQ=255)

                                                                                                                 cttttcttttATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTAGTATAAGTTGATTTTAAACTGTAACAATTAAATTTa                        >  2:2932263/1‑140 (MQ=255)

                                                                                                                         ttATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGtt                >  1:220356/1‑140 (MQ=255)

                                                                                                                               cttcttCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGAt                                                                                      <  1:2875205/64‑1 (MQ=255)

                                                                                                                                       aaaGCTGCTTTTCCAATGAAACAAAATCGGCAGACGTAATCTGAATAAACCTTGATGTGTAATGTCATGATAATCTCCTTTAGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAaagaag  <  1:3521019/140‑1 (MQ=255)

                                                                                                                                       aaaGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAaagaag  <  1:3735243/140‑1 (MQ=255)

                                                                                                                                       aaaGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAaagaag  <  2:833926/140‑1 (MQ=255)

                                                                                                                                       aaaGCGGCTTGTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAaagaag  <  2:3703334/140‑1 (MQ=255)

ATTGGCTGAATCGCTGTCTGCCACATGTACTGTTTGGAAGGATCATTGACCGGGTCAAGCTGTGGAGATGGGCTTGGGCGCAGTTCAAACGGCATCCACTCGACTTCAACATCCTTTTCTTTTATCGCTTCTTCAAAAGCGGCTTTTCCAATGAAACAAAATGGGCAGACGTAATCTGAATAAACCTTGATGTGTACTGTCATGATAATCTCCTTTCGTATAAGTTGATTTTAAACTGTAACAATTAAAGTTACAAATGTTTTTTTAAAAAGAAG  >  NZ_CP034943/3751451‑3751725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.